2018 article

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Chromatin structure profile data from DNS-seq: Differential nuclease sensitivity mapping of four reference tissues of B73 maize (Zea mays L)

Turpin, Z. M., Vera, D. L., Savadel, S. D., Lung, P.-Y., Wear, E. E., Mickelson-Young, L., … Bass, H. W. (2018, October). DATA IN BRIEF, Vol. 20, pp. 358–363.

By: Z. Turpin ^*, D. Vera ^*, S. Savadel ^*, P. Lung^*, E. Wear ⁿ, L. Mickelson-Young ⁿ, W. Thompson ⁿ , L. Hanley-Bowdoin ⁿ  ...and 3 other authors, J. Dennis ^*, J. Zhang ^* & H. Bass ^*

TL;DR: Data from Next-Generation Sequencing of differential micrococcal nuclease digestions of formaldehyde-crosslinked chromatin in selected tissues of maize (Zea mays) inbred line B73 are presented. (via Semantic Scholar)

10.1016/j.dib.2018.08.015

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PubMed

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3. Good Health and Well-being (Web of Science)

Source: Web Of Science

Added: December 3, 2018

Presented here are data from Next-Generation Sequencing of differential micrococcal nuclease digestions of formaldehyde-crosslinked chromatin in selected tissues of maize (Zea mays) inbred line B73. Supplemental materials include a wet-bench protocol for making DNS-seq libraries, the DNS-seq data processing pipeline for producing genome browser tracks. This report also includes the peak-calling pipeline using the iSeg algorithm to segment positive and negative peaks from the DNS-seq difference profiles. The data repository for the sequence data is the NCBI SRA, BioProject Accession PRJNA445708.