2022 review

Defining clinical outcome pathways

[Review of ]. DRUG DISCOVERY TODAY, 27(6), 1671–1678.

By: D. Korn*, A. Thieme*, V. Alves*, M. Yeakey*, J. Borba*, S. Capuzzi*, K. Fecho*, C. Bizon* ...

author keywords: Clinical outcome pathways; Key molecular events; Drug repurposing; Knowledge graphs
MeSH headings : Drug Discovery; Drug Repositioning; Knowledge; Knowledge Bases
TL;DR: It is proposed that broader use of COP uncovered with the help of biomedical knowledge graph mining will likely accelerate drug discovery and repurposing efforts. (via Semantic Scholar)
UN Sustainable Development Goal Categories
5. Gender Equality (Web of Science)
Source: Web Of Science
Added: June 27, 2022

Here, we propose a broad concept of 'Clinical Outcome Pathways' (COPs), which are defined as a series of key molecular and cellular events that underlie therapeutic effects of drug molecules. We formalize COPs as a chain of the following events: molecular initiating event (MIE) → intermediate event(s) → clinical outcome. We illustrate the concept with COP examples both for primary and alternative (i.e., drug repurposing) therapeutic applications. We also describe the elucidation of COPs for several drugs of interest using the publicly accessible Reasoning Over Biomedical Objects linked in Knowledge-Oriented Pathways (ROBOKOP) biomedical knowledge graph-mining tool. We propose that broader use of COP uncovered with the help of biomedical knowledge graph mining will likely accelerate drug discovery and repurposing efforts.