@article{evans_fink_vazquez-torres_porwollik_jones-carson_mcclelland_hassan_2011, title={Analysis of the ArcA regulon in anaerobically grown Salmonella enterica sv. Typhimurium}, volume={11}, ISSN={["1471-2180"]}, DOI={10.1186/1471-2180-11-58}, abstractNote={Abstract}, journal={BMC MICROBIOLOGY}, author={Evans, Matthew R. and Fink, Ryan C. and Vazquez-Torres, Andres and Porwollik, Steffen and Jones-Carson, Jessica and McClelland, Michael and Hassan, Hosni M.}, year={2011}, month={Mar} } @article{troxell_sikes_fink_vazquez-torres_jones-carson_hassan_2011, title={Fur Negatively Regulates hns and Is Required for the Expression of HilA and Virulence in Salmonella enterica Serovar Typhimurium}, volume={193}, ISSN={["1098-5530"]}, DOI={10.1128/jb.00942-10}, abstractNote={ABSTRACT}, number={2}, journal={JOURNAL OF BACTERIOLOGY}, author={Troxell, Bryan and Sikes, Michael L. and Fink, Ryan C. and Vazquez-Torres, Andres and Jones-Carson, Jessica and Hassan, Hosni M.}, year={2011}, month={Jan}, pages={497–505} } @article{troxell_fink_porwollik_mcclelland_hassan_2011, title={The Fur regulon in anaerobically grown Salmonella enterica sv. Typhimurium: identification of new Fur targets}, volume={11}, ISSN={["1471-2180"]}, DOI={10.1186/1471-2180-11-236}, abstractNote={Abstract}, journal={BMC MICROBIOLOGY}, author={Troxell, Bryan and Fink, Ryan C. and Porwollik, Steffen and McClelland, Michael and Hassan, Hosni M.}, year={2011}, month={Oct} } @article{fink_evans_porwollik_vazquez-torres_jones-carson_troxell_libby_mcclelland_hassan_2007, title={FNR is a global regulator of virulence and anaerobic metabolism in Salmonella enterica serovar typhimurium (ATCC 14028s)}, volume={189}, ISSN={["1098-5530"]}, DOI={10.1128/JB.00726-06}, abstractNote={ABSTRACT}, number={6}, journal={JOURNAL OF BACTERIOLOGY}, author={Fink, Ryan C. and Evans, Matthew R. and Porwollik, Steffen and Vazquez-Torres, Andres and Jones-Carson, Jessica and Troxell, Bryan and Libby, Stephen J. and McClelland, Michael and Hassan, Hosni M.}, year={2007}, month={Mar}, pages={2262–2273} } @article{evans_swaminathan_graves_altermann_klaenhammer_fink_kernodle_kathariou_2004, title={Genetic markers unique to Listeria monocytogenes serotype 4b differentiate epidemic clone II (hot dog outbreak strains) from other lineages}, volume={70}, ISSN={["1098-5336"]}, DOI={10.1128/AEM.70.4.2383-2390.2004}, abstractNote={ABSTRACT}, number={4}, journal={APPLIED AND ENVIRONMENTAL MICROBIOLOGY}, author={Evans, MR and Swaminathan, B and Graves, LM and Altermann, E and Klaenhammer, TR and Fink, RC and Kernodle, S and Kathariou, S}, year={2004}, month={Apr}, pages={2383–2390} } @article{fink_scandalios_2002, title={Molecular evolution and structure-function relationships of the superoxide dismutase gene families in angiosperms and their relationship to other eukaryotic and prokaryotic superoxide dismutases}, volume={399}, ISSN={["1096-0384"]}, DOI={10.1006/abbi.2001.2739}, abstractNote={This study assesses whether the phylogenetic relationships between SODs from different organisms could assist in elucidating the functional relationships among these enzymes from evolutionarily distinct species. Phylogenetic trees and intron positions were compared to determine the relationships among these enzymes. Alignment of Cu/ZnSOD amino acid sequences indicates high homology among plant sequences, with some features that distinguish chloroplastic from cytosolic Cu/ZnSODs. Among eukaryotes, the plant SODs group together. Alignment of the Mn and FeSOD amino acid sequences indicates a higher degree of homology within the group of MnSODs (>70%) than within FeSODs (approximately 60%). Tree topologies are similar and reflect the taxonomic classification of the corresponding species. Intron number and position in the Cu/Zn Sod genes are highly conserved in plants. Genes encoding cytosolic SODs have seven introns and genes encoding chloroplastic SODs have eight introns, except the chloroplastic maize Sod1, which has seven. In Mn Sod genes the number and position of introns are highly conserved among plant species, but not among nonplant species. The link between the phylogenetic relationships and SOD functions remains unclear. Our findings suggest that the 5' region of these genes played a pivotal role in the evolution of function of these enzymes. Nevertheless, the system of SODs is highly structured and it is critical to understand the physiological differences between the SODs in response to different stresses in order to compare their functions and evolutionary history.}, number={1}, journal={ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS}, author={Fink, RC and Scandalios, JG}, year={2002}, month={Mar}, pages={19–36} }