Works (32)

Updated: July 5th, 2023 21:18

2011 journal article

Group-specific comparison of four lactobacilli isolated from human sources using differential blast analysis

GENES AND NUTRITION, 6(3), 319–340.

By: E. Altermann n & T. Klaenhammer n

co-author countries: New Zealand 🇳🇿 United States of America 🇺🇸
author keywords: In silico analysis; PAU; Adhesion; Stress response; Bacteriophage
Source: Web Of Science
Added: August 6, 2018

2009 patent

Compositions comprising promoter sequences and methods of use

By: R. Barrangou, A. Azcarate-Peril, E. Altermann, T. Duong & T. Klaenhammer

Source: NC State University Libraries
Added: August 6, 2018

2009 patent

Lactobacillus acidophillus nucleic acid sequences encoding cell surface protein homologues and uses therefore

By: T. Klaenhammer, W. Russell, E. Altermann & B. Buck

Source: NC State University Libraries
Added: August 6, 2018

2009 patent

Lactobacillus acidophilus nucleic acid sequences encoding stress-related proteins and uses therefor

By: T. Klaenhammer, E. Altermann, M. Azcarate-Peril, O. McAuliffe & W. Russell

Source: NC State University Libraries
Added: August 6, 2018

2009 patent

Nucleic acid sequences encoding two-component sensing and regulatory proteins, antimicrobial proteins and uses therefor

By: T. Klaenhammer, W. Russell, E. Altermann & A. Azcarate-Peril

Source: NC State University Libraries
Added: August 6, 2018

2008 article

Analysis of the genome sequence of Lactobacillus gasseri ATCC 33323 reveals the molecular basis of an autochthonous intestinal organism

Azcarate-Peril, M. A., Altermann, E., Goh, Y. J., Tallon, R., Sanozky-Dawes, R. B., Pfeiler, E. A., … Klaenhammer, T. R. (2008, August). APPLIED AND ENVIRONMENTAL MICROBIOLOGY, Vol. 74, pp. 4610–4625.

By: M. Azcarate-Peril n, E. Altermann n, Y. Goh n, R. Tallon n, R. Sanozky-Dawes n, E. Pfeiler n, S. O'Flaherty n, B. Buck n ...

co-author countries: United States of America 🇺🇸
MeSH headings : Adult; Bacterial Adhesion / genetics; Bacterial Adhesion / physiology; Bacterial Proteins / genetics; Child; DNA Primers; Gastrointestinal Tract / microbiology; Genes, Bacterial; Genome, Bacterial; Humans; Infant, Newborn; Intestines / microbiology; Lactobacillus / genetics; Lactobacillus / isolation & purification; Lactobacillus / pathogenicity; Open Reading Frames
Sources: Web Of Science, ORCID
Added: August 6, 2018

2008 article

Functional genomics of probiotic Lactobacilli

Klaenhammer, T. R., Altermann, E., Pfeiler, E., Buck, B. L., Goh, Y.-J., O'Flaherty, S., … Duong, T. (2008, September). JOURNAL OF CLINICAL GASTROENTEROLOGY, Vol. 42, pp. S160–S162.

By: T. Klaenhammer n, E. Altermann n, E. Pfeiler n, B. Buck n, Y. Goh n, S. O'Flaherty n, R. Barrangou n, T. Duong n

co-author countries: United States of America 🇺🇸
author keywords: Lactobacillus acidophilus; Lactobacillus johnsonii; Lactobacillus plantarum; Lactobacillus gasseri; genomics; probiotic cultures; lactic acid bacteria
MeSH headings : Animals; Bacterial Proteins / genetics; Bacterial Proteins / metabolism; Evolution, Molecular; Genome, Bacterial; Genomics; Humans; Lactobacillus / classification; Lactobacillus / genetics; Lactobacillus / metabolism; Lactobacillus / physiology; Probiotics / metabolism; Species Specificity
Sources: Web Of Science, ORCID
Added: August 6, 2018

2008 patent

Lactobacillus acidophilus nucleic acid sequences encoding carbohydrate utilization-related proteins and uses therefor

By: T. Klaenhammer, E. Altermann, R. Barrangou, W. Russell & T. Duong

Source: NC State University Libraries
Added: August 6, 2018

2008 patent

Lactobacillus acidophilus nucleic acid sequences encoding cell surface protein homologues and uses therefore

Washington, DC: U.S. Patent and Trademark Office.

By: T. Klaenhammer, E. Altermann, B. Buck & W. Russell

Source: NC State University Libraries
Added: August 6, 2018

2008 patent

Lactobacillus acidophilus nucleic acid sequences encoding protease homologues and uses therefore

By: T. Klaenhammer, E. Altermann & W. Russell

Source: NC State University Libraries
Added: August 6, 2018

2008 patent

Lactobacillus acidophilus nucleic acids and uses thereof

By: T. Klaenhammer, A. Azcarate-Peril & E. Altermann

Source: NC State University Libraries
Added: August 6, 2018

2008 journal article

S layer protein A of Lactobacillus acidophilus NCFM regulates immature dendritic cell and T cell functions

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 105(49), 19474–19479.

By: S. Konstantinov*, H. Smidt*, W. Vos*, S. Bruijns*, S. Singh*, F. Valence, D. Molle, S. Lortal ...

co-author countries: Finland 🇫🇮 Netherlands 🇳🇱 United States of America 🇺🇸
author keywords: lactobacilli; DC-SIGN
MeSH headings : Bacterial Proteins / genetics; Bacterial Proteins / immunology; Bacterial Proteins / metabolism; Cell Differentiation / immunology; Cell Line; Cytokines / metabolism; Dendritic Cells / immunology; Dendritic Cells / microbiology; Immune Tolerance / immunology; Kidney / cytology; Lactobacillus acidophilus / genetics; Lactobacillus acidophilus / immunology; Lactobacillus acidophilus / metabolism; Macrophages / immunology; Macrophages / microbiology; Membrane Glycoproteins / genetics; Membrane Glycoproteins / immunology; Membrane Glycoproteins / metabolism; Mutagenesis; Probiotics; T-Lymphocytes / immunology; T-Lymphocytes / microbiology; Toll-Like Receptor 2 / genetics; Toll-Like Receptor 2 / metabolism; Toll-Like Receptor 4 / genetics; Toll-Like Receptor 4 / metabolism; Transfection
Source: Web Of Science
Added: August 6, 2018

2007 article

Influence of the dairy environment on gene expression and substrate(1-3)

Klaenhammer, T. R., Azcarate-Peril, M. A., Altermann, E., & Barrangou, R. (2007, March). JOURNAL OF NUTRITION, Vol. 137, pp. 748S–750S.

By: T. Klaenhammer n, M. Azcarate-Peril n, E. Altermann n & R. Barrangou n

co-author countries: United States of America 🇺🇸
MeSH headings : Animals; Cattle; Dairy Products; Dairying; Environment; Gene Expression Regulation, Bacterial; Lactobacillaceae / genetics; Lactobacillaceae / metabolism; Probiotics
Sources: Web Of Science, ORCID
Added: August 6, 2018

2006 journal article

Comparative genomics and transcriptional analysis of prophages identified in the Genomes of Lactobacillus gasseri, Lactobacillus salivarius, and Lactobacillus casei

APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 72(5), 3130–3146.

By: M. Ventura*, C. Canchaya*, V. Bernini*, E. Altermann n, R. Barrangou n, S. McGrath*, M. Claesson*, Y. Li* ...

co-author countries: Ireland 🇮🇪 Italy 🇮🇹 United States of America 🇺🇸
MeSH headings : Animals; Base Sequence; Genome, Bacterial; Genome, Viral; Genomics; Humans; Lactobacillus / genetics; Lactobacillus / virology; Lacticaseibacillus casei / virology; Molecular Sequence Data; Phylogeny; Prophages / classification; Prophages / genetics; Prophages / isolation & purification; Prophages / metabolism; Sequence Analysis, DNA; Siphoviridae / classification; Siphoviridae / genetics; Siphoviridae / isolation & purification; Siphoviridae / metabolism; Transcription, Genetic; Viral Proteins / genetics; Viral Proteins / metabolism
Sources: Web Of Science, ORCID
Added: August 6, 2018

2006 journal article

Comparative genomics of the lactic acid bacteria

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 103(42), 15611–15616.

By: K. Makarova*, A. Slesarev*, Y. Wolf*, A. Sorokin*, B. Mirkin*, E. Koonin*, A. Pavlov*, N. Pavlova ...

co-author countries: United Kingdom of Great Britain and Northern Ireland 🇬🇧 United States of America 🇺🇸
author keywords: evolutionary genomics; fermentation
MeSH headings : Animals; Bacterial Proteins / classification; Bacterial Proteins / genetics; Bacterial Proteins / metabolism; Biological Evolution; Food Microbiology; Gene Transfer, Horizontal; Genome, Bacterial; Genomics; Lactic Acid / metabolism; Lactobacillus / classification; Lactobacillus / genetics; Phylogeny; Streptococcaceae / classification; Streptococcaceae / genetics
Sources: Web Of Science, ORCID
Added: August 6, 2018

2005 journal article

Complete genome sequence of the probiotic lactic acid bacterium Lactobacillus acidophilus NCFM

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 102(11), 3906–3912.

By: E. Altermann n, W. Russell n, M. Azcarate-Peril n, R. Barrangou n, B. Buck n, O. McAuliffe n, N. Souther n, A. Dobson n ...

co-author countries: United States of America 🇺🇸
author keywords: adhesion; stress response; proteolytic system; sugar metabolism; in silico analysis
MeSH headings : Bacterial Adhesion / genetics; Bacteriocins / genetics; Bacteriophages / genetics; Bacteriophages / pathogenicity; Carbohydrate Metabolism; Computational Biology; Genome, Bacterial; Lactobacillus acidophilus / genetics; Lactobacillus acidophilus / metabolism; Lactobacillus acidophilus / virology; Molecular Sequence Data; Peptide Hydrolases / genetics; Prophages / genetics; Sequence Analysis, DNA; Transposases / genetics
Sources: Web Of Science, ORCID
Added: August 6, 2018

2005 journal article

Functional analysis of putative adhesion factors in Lactobacillus acidophilus NCFM

APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 71(12), 8344–8351.

By: B. Buck n, E. Altermann n, T. Svingerud n & T. Klaenhammer n

co-author countries: United States of America 🇺🇸
MeSH headings : Adhesins, Bacterial / genetics; Adhesins, Bacterial / physiology; Base Sequence; DNA Primers; DNA, Bacterial / genetics; Escherichia coli / genetics; Genome, Bacterial; Lactobacillus acidophilus / classification; Lactobacillus acidophilus / genetics; Lactobacillus acidophilus / physiology; Mucins / metabolism; Phylogeny; Plasmids; Restriction Mapping
Source: Web Of Science
Added: August 6, 2018

2005 journal article

Genomic Perspectives on Probiotic Lactic Acid Bacteria

Bioscience and Microflora, 24(2), 31–33.

By: T. Klaenhammer n, A. Peril n, R. Barrangou n, T. Duong n & E. Altermann n

co-author countries: United States of America 🇺🇸
Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2005 review

Genomic features of lactic acid bacteria effecting bioprocessing and health

[Review of ]. FEMS MICROBIOLOGY REVIEWS, 29(3), 393–409.

By: T. Klaenhammer n, R. Barrangou n, B. Buck n, M. Azcarate-Peril n & E. Altermann n

co-author countries: United States of America 🇺🇸
author keywords: lactic acid bacteria; genomics; bioprocessing; probiotics; comparative genomics; functional genomics
MeSH headings : Food Microbiology; Genome, Bacterial; Genomics; Health; Humans; Lactobacillus / genetics; Lactobacillus / growth & development; Lactobacillus / physiology; Lactococcus / genetics; Lactococcus / growth & development; Lactococcus / physiology; Probiotics
Sources: Web Of Science, ORCID
Added: August 6, 2018

2005 journal article

Microarray analysis of a two-component regulatory system involved in acid resistance and proteolytic activity in Lactobacillus acidophilus

APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 71(10), 5794–5804.

By: M. Azcarate-Peril n, O. McAuliffe n, E. Altermann n, S. Lick n, W. Russell* & T. Klaenhammer n

co-author countries: United States of America 🇺🇸
MeSH headings : Bacterial Proteins / genetics; Bacterial Proteins / metabolism; Base Sequence; Culture Media; Gene Expression Profiling; Gene Expression Regulation, Bacterial; Histidine Kinase; Hydrogen-Ion Concentration; Lactobacillus acidophilus / genetics; Lactobacillus acidophilus / growth & development; Lactobacillus acidophilus / metabolism; Lactobacillus acidophilus / physiology; Mutation; Oligonucleotide Array Sequence Analysis / methods; Peptide Hydrolases / genetics; Peptide Hydrolases / metabolism; Protein Kinases / genetics; Protein Kinases / metabolism; Signal Transduction
Source: Web Of Science
Added: August 6, 2018

2005 journal article

PathwayVoyager: pathway mapping using the Kyoto Encyclopedia of Genes and Genomes (KEGG) database

BMC Genomics, 6.

By: E. Altermann & T. Klaenhammer

Source: NC State University Libraries
Added: August 6, 2018

2005 journal article

Sequence analysis of the Lactobacillus plantarum bacteriophage Phi JL-1

GENE, 348, 45–54.

By: Z. Lu*, E. Altermann n, F. Breidt n, P. Predki, H. Fleming* & T. Klaenhammer n

co-author countries: United States of America 🇺🇸
author keywords: bacteriophage; Phi JL-1; sequence analysis; structural proteins; Lactobacillus plantarum
MeSH headings : Amino Acid Sequence; Bacteriolysis / genetics; Bacteriophages / genetics; Bacteriophages / ultrastructure; Chromosome Mapping; DNA Replication / genetics; DNA, Viral / chemistry; DNA, Viral / genetics; Genes / genetics; Genome, Viral; Lactobacillus plantarum / virology; Microscopy, Electron; Molecular Sequence Data; Sequence Analysis, DNA; Sequence Homology, Amino Acid; Viral Structural Proteins / genetics; Virus Assembly / genetics
Source: Web Of Science
Added: August 6, 2018

2004 journal article

Epidemic clone I-specific genetic markers in strains of Listeria monocytogenes serotype 4b from foods

APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 70(7), 4158–4164.

By: S. Yildirim n, W. Lin*, A. Hitchins*, L. Jaykus n, E. Altermann n, T. Klaenhammer n, S. Kathariou n

co-author countries: United States of America 🇺🇸
MeSH headings : Base Composition; DNA, Bacterial / analysis; Food Microbiology; Genetic Markers; Listeria monocytogenes / classification; Listeria monocytogenes / genetics; Serotyping
Source: Web Of Science
Added: August 6, 2018

2004 article

Epidemic clone I-specific genetic markers in strains of Listeria monocytogenes serotype 4b from foods (vol 70, pg 4158, 2004)

Yildirim, S., Lin, W., Hitchins, A. D., Jaykus, L. A., Altermann, E., Klaenhammer, T. R., & Kathariou, S. (2004, December). APPLIED AND ENVIRONMENTAL MICROBIOLOGY, Vol. 70, pp. 7581–7581.

By: S. Yildirim n, W. Lin n, A. Hitchins n, L. Jaykus n, E. Altermann n, T. Klaenhammer*, S. Kathariou n

co-author countries: United States of America 🇺🇸
Source: Web Of Science
Added: August 6, 2018

2004 journal article

Genetic markers unique to Listeria monocytogenes serotype 4b differentiate epidemic clone II (hot dog outbreak strains) from other lineages

APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 70(4), 2383–2390.

By: M. Evans n, B. Swaminathan*, L. Graves*, E. Altermann n, T. Klaenhammer n, R. Fink n, S. Kernodle n, S. Kathariou n

co-author countries: United States of America 🇺🇸
MeSH headings : Animals; Base Sequence; DNA Primers / genetics; DNA, Bacterial / genetics; Disease Outbreaks; Europe / epidemiology; Food Microbiology; Foodborne Diseases / epidemiology; Foodborne Diseases / microbiology; Genes, Bacterial; Genetic Markers; Humans; Listeria monocytogenes / classification; Listeria monocytogenes / genetics; Listeria monocytogenes / isolation & purification; Listeria monocytogenes / pathogenicity; Meat Products / microbiology; North America / epidemiology; Polymerase Chain Reaction; Serotyping
Source: Web Of Science
Added: August 6, 2018

2004 journal article

Identification and inactivation of genetic loci involved with Lactobacillus acidophilus acid tolerance

APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 70(9), 5315–5322.

co-author countries: United States of America 🇺🇸
MeSH headings : Base Sequence; Calorimetry; DNA Primers; Genome, Bacterial; Hydrogen-Ion Concentration; Lactobacillus acidophilus / genetics; Lactobacillus acidophilus / growth & development; Molecular Sequence Data; Polymerase Chain Reaction; Restriction Mapping
Source: Web Of Science
Added: August 6, 2018

2004 journal article

Identification and phenotypic characterization of the cell-division protein CdpA

GENE, 342(1), 189–197.

By: E. Altermann n, B. Buck n, R. Cano* & T. Klaenhammer n

co-author countries: United States of America 🇺🇸
author keywords: lactic acid bacteria; lactobacillus; cell adhesion; stress tolerance; functional inactivation; cell wall; cell separation
MeSH headings : Bacterial Adhesion / genetics; Bacterial Adhesion / physiology; Bacterial Proteins / genetics; Bacterial Proteins / metabolism; Caco-2 Cells; Cell Cycle Proteins / genetics; Cell Division / drug effects; Cell Division / genetics; Cell Division / physiology; Cell Wall / metabolism; Culture Media / pharmacology; DNA, Bacterial / chemistry; DNA, Bacterial / genetics; DNA, Bacterial / isolation & purification; Ethanol / pharmacology; Freezing; Gene Silencing; Humans; Lactobacillus acidophilus / drug effects; Lactobacillus acidophilus / genetics; Lactobacillus acidophilus / growth & development; Membrane Glycoproteins / genetics; Molecular Sequence Data; Mutation; Phylogeny; Sequence Analysis, DNA; Sodium Chloride / pharmacology; Temperature
Source: Web Of Science
Added: August 6, 2018

2004 patent

Lactobacillus acidophilus nucleic acids encoding fructo-oligosaccharide utilization compounds and uses thereof

Washington, DC: U.S. Patent and Trademark Office.

By: R. Barrangou, T. Klaenhammer & E. Altermann

Source: NC State University Libraries
Added: August 6, 2018

2004 journal article

The genome sequence of the probiotic intestinal bacterium Lactobacillus johnsonii NCC 533

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 101(8), 2512–2517.

By: R. Pridmore n, B. Berger n, F. Desiere n, D. Vilanova n, C. Barretto n, A. Pittet n, M. Zwahlen n, M. Rouvet n ...

co-author countries: Switzerland 🇨🇭 United States of America 🇺🇸
MeSH headings : Biological Transport; Cell Adhesion; Energy Metabolism; Fimbriae, Bacterial / genetics; Genes, Bacterial / genetics; Genome, Bacterial; Humans; Intestinal Mucosa / microbiology; Lactobacillus / genetics; Lactobacillus / metabolism; Lactobacillus / pathogenicity; Molecular Sequence Data; Operon / genetics
Sources: Web Of Science, ORCID
Added: August 6, 2018

2003 journal article

Functional and comparative genomic analyses of an operon involved in fructooligosaccharide utilization by Lactobacillus acidophilus

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 100(15), 8957–8962.

By: R. Barrangou n, E. Altermann n, R. Hutkins n, R. Cano n & T. Klaenhammer n

co-author countries: United States of America 🇺🇸
MeSH headings : ATP-Binding Cassette Transporters / genetics; ATP-Binding Cassette Transporters / metabolism; Bacterial Proteins / genetics; Bacterial Proteins / metabolism; Base Sequence; Biological Transport, Active; Chromosome Mapping; DNA, Bacterial / genetics; Escherichia coli Proteins / genetics; Escherichia coli Proteins / metabolism; Genome, Bacterial; Lac Repressors; Lactobacillus acidophilus / genetics; Lactobacillus acidophilus / metabolism; Molecular Sequence Data; Multigene Family; Mutation; Oligosaccharides / metabolism; Operon; Phenotype; Phylogeny; Repressor Proteins / genetics; Repressor Proteins / metabolism; Sequence Homology, Nucleic Acid; Species Specificity
Sources: Web Of Science, ORCID
Added: August 6, 2018

2003 journal article

Isolation and characterization of a Lactobacillus plantarum bacteriophage, Phi JL-1, from a cucumber fermentation

INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY, 84(2), 225–235.

By: Z. Lu*, F. Breidt n, H. Fleming n, E. Altermann n & T. Klaenhammer n

co-author countries: United States of America 🇺🇸
author keywords: bacteriophage; Lactobacillus plantarum; lactic acid bacteria; vegetable fermentation; cucumber fermentation
MeSH headings : Adsorption; Bacteriophages / genetics; Bacteriophages / isolation & purification; Bacteriophages / physiology; Cucumis sativus / microbiology; Culture Media / chemistry; DNA, Viral / analysis; Electrophoresis, Polyacrylamide Gel; Fermentation; Food Microbiology; Genome, Viral; Hydrogen-Ion Concentration; Kinetics; Lactobacillus / virology
Source: Web Of Science
Added: August 6, 2018

2002 journal article

Discovering lactic acid bacteria by genomics

Antonie Van Leeuwenhoek, 82(1-4), 29–58.

By: T. Klaenhammer n, E. Altermann n, F. Arigoni*, A. Bolotin*, F. Breidt n, J. Broadbent*, R. Cano*, S. Chaillou ...

co-author countries: Belgium 🇧🇪 Switzerland 🇨🇭 France 🇫🇷 United Kingdom of Great Britain and Northern Ireland 🇬🇧 Ireland 🇮🇪 Netherlands 🇳🇱 New Zealand 🇳🇿 United States of America 🇺🇸
MeSH headings : Bifidobacterium / genetics; Fermentation; Genomics; Gram-Positive Bacteria / genetics; Lactobacillus / classification; Lactobacillus / genetics; Lactococcus lactis / classification; Lactococcus lactis / genetics
Source: NC State University Libraries
Added: August 6, 2018