Angelito Inocencio Nepomuceno

Works (7)

Updated: July 5th, 2023 15:44

2015 journal article

Global Proteomic Analysis of Functional Compartments in Immature Avian Follicles Using Laser Microdissection Coupled to LC-MS/MS

JOURNAL OF PROTEOME RESEARCH, 14(9), 3912–3923.

By: A. Nepomuceno n, D. Muddiman n & J. Petitte n

co-author countries: United States of America 🇺🇸
author keywords: microdissection; proteomics; ovary; follicle; avian; chicken; yolk; steroidogenesis; vitellogenin
MeSH headings : Animals; Avian Proteins / analysis; Avian Proteins / chemistry; Chickens; Chromatography, Liquid; Female; Laser Capture Microdissection / methods; Ovarian Follicle / chemistry; Proteome / analysis; Proteome / chemistry; Proteomics / methods; Tandem Mass Spectrometry
Sources: Web Of Science, ORCID
Added: August 6, 2018

2015 journal article

In-depth LC-MS/MS analysis of the chicken ovarian cancer proteome reveals conserved and novel differentially regulated proteins in humans

ANALYTICAL AND BIOANALYTICAL CHEMISTRY, 407(22), 6851–6863.

By: A. Nepomuceno n, H. Shao*, K. Jing, Y. Ma*, J. Petitte n, M. Idowu*, D. Muddiman n, X. Fang*, A. Hawkridge*

co-author countries: United States of America 🇺🇸
author keywords: Mass spectrometry; Proteomics; Ovarian Cancer; Chicken; Ovostatin 2; OVOS2
MeSH headings : Amino Acid Sequence; Animals; Chickens; Chromatography, Liquid / methods; Conserved Sequence; Female; Gene Expression Regulation, Neoplastic; Humans; Mass Spectrometry / methods; Molecular Sequence Data; Neoplasm Proteins / metabolism; Ovarian Neoplasms / metabolism; Proteome / chemistry; Proteome / metabolism; Species Specificity
Sources: Web Of Science, ORCID
Added: August 6, 2018

2015 journal article

Machine learning reveals sex-specific 17β-estradiol-responsive expression patterns in white perch (Morone americana) plasma proteins

PROTEOMICS, 15(15), 2678–2690.

By: J. Schilling n, A. Nepomuceno n, A. Planchart n, J. Yoder n, R. Kelly n, D. Muddiman n, H. Daniels n, N. Hiramatsu*, B. Reading n

co-author countries: Japan 🇯🇵 United States of America 🇺🇸

Contributors: J. Schilling n, A. Nepomuceno n, A. Planchart n, J. Yoder n, R. Kelly n, D. Muddiman n, H. Daniels n, N. Hiramatsu*, B. Reading n

author keywords: Animal proteomics; Endocrine disrupting compounds; Machine learning; Plasma; Semiquantitative proteomics; Support vector machines
MeSH headings : Animals; Bass / metabolism; Blood Proteins / metabolism; Blotting, Western; Chromatography, Liquid; Estradiol / pharmacology; Estrogens / pharmacology; Female; Fish Proteins / metabolism; Kininogens / metabolism; Male; Nanotechnology / methods; Proteome / drug effects; Proteome / metabolism; Proteomics / methods; Sex Factors; Support Vector Machine; Tandem Mass Spectrometry; Vitellogenins / metabolism
Sources: Web Of Science, ORCID, Crossref
Added: August 6, 2018

2014 journal article

Accurate Identification of Deamidated Peptides in Global Proteomics Using a Quadrupole Orbitrap Mass Spectrometer

JOURNAL OF PROTEOME RESEARCH, 13(2), 777–785.

By: A. Nepomuceno n, R. Gibson n, S. Randall n & D. Muddiman n

co-author countries: United States of America 🇺🇸
author keywords: deamidation; post-translational modification; quadrupole orbitrap mass spectrometry
MeSH headings : Amides / chemistry; Chromatography, Liquid; Peptides / chemistry; Proteomics; Tandem Mass Spectrometry / instrumentation
Sources: Web Of Science, ORCID
Added: August 6, 2018

2014 journal article

C/EBPα regulates CRL4Cdt2-mediated degradation of p21 in response to UVB-induced DNA damage to control the G1/S checkpoint

Cell Cycle, 13(22), 3602–3610.

By: J. Hall n, M. Bereman n, A. Nepomuceno n, E. Thompson n, D. Muddiman n & R. Smart n

co-author countries: United States of America 🇺🇸
author keywords: C/EBP alpha; CRL4(Cdt2); G(1)/S DNA damage checkpoint; keratinocytes; p21
MeSH headings : Animals; CCAAT-Enhancer-Binding Protein-alpha / genetics; CCAAT-Enhancer-Binding Protein-alpha / metabolism; Cell Cycle Checkpoints / genetics; Cell Cycle Checkpoints / radiation effects; Cyclin-Dependent Kinase Inhibitor p21 / metabolism; DNA Damage / genetics; DNA Damage / radiation effects; G1 Phase Cell Cycle Checkpoints / genetics; Keratinocytes / metabolism; Keratinocytes / radiation effects; Mice; Nuclear Proteins / genetics; Nuclear Proteins / metabolism; Proteolysis; Ubiquitin-Protein Ligases / genetics; Ubiquitin-Protein Ligases / metabolism; Ultraviolet Rays; p21-Activated Kinases / genetics; p21-Activated Kinases / metabolism
Sources: Web Of Science, Crossref, ORCID
Added: August 6, 2018

2014 journal article

Compartment Proteomics Analysis of White Perch (Morone americana) Ovary Using Support Vector Machines

JOURNAL OF PROTEOME RESEARCH, 13(3), 1515–1526.

By: J. Schilling n, A. Nepomuceno n, J. Schaff n, D. Muddiman n, H. Daniels n & B. Reading n

co-author countries: United States of America 🇺🇸
author keywords: compartment proteomics; support vector machines; modulated modularity clustering; ovary; oocytes; vitellogenin; transcriptome; mitochondria; alternatively spliced variants
MeSH headings : Animals; Bass / metabolism; Chemical Fractionation; Female; Fish Proteins / analysis; Membrane Proteins / analysis; Mitochondrial Proteins / analysis; Molecular Sequence Annotation; Ovary / chemistry; Ovary / metabolism; Proteomics / methods; Support Vector Machine; Tandem Mass Spectrometry
Sources: Web Of Science, ORCID
Added: August 6, 2018

2013 journal article

Comparative Proteomic Analysis and IgE Binding Properties of Peanut Seed and Testa (Skin)

JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY, 61(16), 3957–3968.

By: B. White*, E. Goekce, A. Nepomuceno n, D. Muddiman n, T. Sanders* & J. Davis*

co-author countries: United States of America 🇺🇸
author keywords: IgE binding; LC-MS/MS; peanut; proteomics; skins; testae
MeSH headings : Allergens / immunology; Antigens, Plant / immunology; Arachis / chemistry; Arachis / immunology; Humans; Immunoglobulin E / metabolism; Peanut Hypersensitivity / immunology; Plant Proteins / analysis; Plant Proteins / chemistry; Plant Proteins / immunology; Proteomics; Seeds / chemistry; Seeds / immunology
Sources: Web Of Science, ORCID
Added: August 6, 2018

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