Works (6)

Updated: July 5th, 2023 15:49

2016 journal article

A Phylogenetic Approach Finds Abundant Interlocus Gene Conversion in Yeast


By: X. Ji n, A. Griffing n & J. Thorne n

author keywords: interlocus gene conversion; multigene family evolution
MeSH headings : Base Sequence / genetics; Biological Evolution; Evolution, Molecular; Gene Conversion; Models, Genetic; Multigene Family; Nucleotides / genetics; Phylogeny; Point Mutation; Saccharomyces cerevisiae; Sequence Analysis, DNA / methods; Yeasts / genetics
TL;DR: This work estimated the percentage of nucleotide substitutions that originate with an IGC event rather than a point mutation in 14 groups of yeast ribosomal protein-coding genes, and found values ranging from 20% to 38%. (via Semantic Scholar)
Source: Web Of Science
Added: August 6, 2018

2015 journal article

Roles of Solvent Accessibility and Gene Expression in Modeling Protein Sequence Evolution


By: K. Wang n, S. Yu n, X. Ji n, C. Lakner n, A. Griffing n & J. Thorne n

author keywords: protein evolution; protein structure; gene expression; codon usage; scaled selection coefficient; solvent accessibility
TL;DR: It is come to the biologically plausible conclusion that both RSA and gene expression are related to amino acid frequencies, but, among synonymous codons, the relative probability of a particular codon is more closely related to gene expression than RSA. (via Semantic Scholar)
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Source: Web Of Science
Added: August 6, 2018

2014 journal article

Structural properties of the minimum cut of partially-supplied graphs


By: A. Griffing n, B. Lynch n & E. Stone n

author keywords: Graph theory; Minimum cut; Tree reconstruction
TL;DR: This work considers pairs of graphs G and H, with respective Laplacian matrices L and M, and calls H partially supplied provided M is a Schur complement of L. (via Semantic Scholar)
Source: Web Of Science
Added: August 6, 2018

2011 journal article

A population genetic approach to mapping neurological disorder genes using deep resequencing

PLoS Genetics, 7(2).

By: R. Myers, F. Casals, J. Gauthier, F. Hamdan, J. Keebler, A. Boyko, C. Bustamante, A. Piton ...

Source: NC State University Libraries
Added: August 6, 2018

2010 journal article

Direct measure of the de novo mutation rate in autism and schizophrenia cohorts

American Journal of Human Genetics, 87(3), 316–324.

By: P. Awadalla, J. Gauthier, R. Myers, F. Casals, F. Hamdan, A. Griffing, M. Cote, E. Henrion ...

Source: NC State University Libraries
Added: August 6, 2018

2009 journal article

On the Fiedler vectors of graphs that arise from trees by Schur complementation of the Laplacian


By: E. Stone n & A. Griffing n

author keywords: Trees; Graph Laplacians; Fiedler vectors; Perron components
TL;DR: This paper considers a point of articulation r in the graph G and derives a related graph G whose Laplacian matrix is L and shows how Fiedler vectors of G relate to the structure of G and provides bounds for the algebraic connectivity of G{r} in terms of the connected components at r in G. (via Semantic Scholar)
Source: Web Of Science
Added: August 6, 2018

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