Caitlin Sterling Lindsey, J. S. (2024, June 20). A life in light - in honor of David Mauzerall on his 95th birthday. PHOTOSYNTHESIS RESEARCH, Vol. 6. https://doi.org/10.1007/s11120-024-01105-6 Taniguchi, M., & Lindsey, J. S. (2024, December 16). Acquisition of absorption and fluorescence spectral data using chatbots. DIGITAL DISCOVERY, Vol. 12. https://doi.org/10.1039/D4DD00255E Taniguchi, M., Du, H., & Lindsey, J. S. (2024). Appropriate handling of fluorescence spectra for accurate spectral overlap (J) values in Forster energy transfer (FRET) calculations. SPIE FUTURE SENSING TECHNOLOGIES 2024, Vol. 13083. https://doi.org/10.1117/12.3025086 Cao, P.-L. D., Nguyen, K. C., Nevzorov, A. A., Jovanovic, M., Nalaoh, P., & Lindsey, J. S. (2025). Conformational Analysis of Swallowtail Motifs in Porphyrins. The Journal of Organic Chemistry. https://doi.org/10.1021/acs.joc.4c02059 Govindjee, G., Canaani, O., Cellarius, R. A., Diner, B., Greenbaum, E., Hou, H. J. M., … Stirbet, A. (2024, August 20). Contributions of David Mauzerall to photosynthesis research - celebrating his 95th th birthday. PHOTOSYNTHETICA, Vol. 8. https://doi.org/10.32615/ps.2024.029 Houson, H. A., Wu, Z., Cao, P.-L. D., Lindsey, J. S., & Lapi, S. E. (2024, April 16). Customizable Porphyrin Platform Enables Folate Receptor PET Imaging Using Copper-64. MOLECULAR PHARMACEUTICS, Vol. 4. https://doi.org/10.1021/acs.molpharmaceut.4c00015 Siwawannapong, K., Diers, J. R., Magdaong, N. C. M., Nalaoh, P., Kirmaier, C., Lindsey, J. S., … Bocian, D. F. (2024, May 1). Extension of nature's NIR-I chromophore into the NIR-II region. PHYSICAL CHEMISTRY CHEMICAL PHYSICS, Vol. 5. https://doi.org/10.1039/d4cp00779d Liu, Q., Ntim, T., Wu, Z., Houson, H. A., Lapi, S. E., & Lindsey, J. S. (2024, June 7). Molecular design for sub-micromolar enzyme-instructed self-assembly (EISA). NEW JOURNAL OF CHEMISTRY, Vol. 6. https://doi.org/10.1039/d4nj01798f Cao, P.-L. D., Wu, Z., Nalaoh, P., & Lindsey, J. S. (2024, June 5). Molecular designs with PEG groups for water-solubilization of sparsely substituted porphyrins. NEW JOURNAL OF CHEMISTRY, Vol. 6. https://doi.org/10.1039/d4nj01178c Govindjee, G., Stirbet, A., Lindsey, J. S., & Scheer, H. (2024, March 15). On the Pelletier and Caventou (1817,1818) papers on chlorophyll and beyond. PHOTOSYNTHESIS RESEARCH, Vol. 3. https://doi.org/10.1007/s11120-024-01081-x Taniguchi, M., & Lindsey, J. S. (2024, November 4). Performance of chatbots in queries concerning fundamental concepts in photochemistry. PHOTOCHEMISTRY AND PHOTOBIOLOGY, Vol. 11. https://doi.org/10.1111/php.14037 Aravindu, K., Taniguchi, M., Bocian, D. F., & Lindsey, J. S. (2024). Synthesis of (oxo)chlorin dimers chelated with thallium(III). JOURNAL OF PORPHYRINS AND PHTHALOCYANINES, 28(08), 527–535. https://doi.org/10.1142/S1088424624500548 Tran, A. T. N., Wang, P., Zhang, S., Jovanovic, M., Siewert, B., Moser, S., & Lindsey, J. S. (2024, June 6). Synthesis of a model phyllobilin bearing an optical marker. NEW JOURNAL OF CHEMISTRY, Vol. 6. https://doi.org/10.1039/d4nj01533a Nguyen, K. C., Chung, D. T. M., Nalaoh, P., & Lindsey, J. S. (2024, January 11). Synthesis of chiral hexynones for use as precursors to native photosynthetic hydroporphyrins. NEW JOURNAL OF CHEMISTRY, Vol. 1. https://doi.org/10.1039/d3nj03900e Wang, J., Taniguchi, M., Bocian, D. F., & Lindsey, J. S. (2024). Synthesis of porphyrin triads chelated with thallium(III) for studies of ground-state hole/electron transfer. JOURNAL OF PORPHYRINS AND PHTHALOCYANINES, 28(08), 515–526. https://doi.org/10.1142/S1088424624500524 Taniguchi, M., & Lindsey, J. S. (2023). Absorption and fluorescence spectra of open-chain tetrapyrrole pigments-bilirubins, biliverdins, phycobilins, and synthetic analogues. JOURNAL OF PHOTOCHEMISTRY AND PHOTOBIOLOGY C-PHOTOCHEMISTRY REVIEWS, 55. https://doi.org/10.1016/j.jphotochemrev.2023.100585 Son, J., Wu, Z., Dou, J., Fujita, H., Cao, P.-L. D., Liu, Q., & Lindsey, J. S. (2023). Article Tethered Indoxyl-Glucuronides for Enzymatically Triggered Cross-Linking. MOLECULES, 28(10). https://doi.org/10.3390/molecules28104143 Tran, V.-P., Wang, P., Matsumoto, N., Liu, S., Jing, H., Nalaoh, P., … Lindsey, J. S. (2023). Bacteriochlorin syntheses - Status, problems, and exploration. JOURNAL OF PORPHYRINS AND PHTHALOCYANINES, 8. https://doi.org/10.1142/S1088424623501171 Lindsey, J. S., & Taniguchi, M. (2023). Core chromophores of native photosynthetic pigments. In J. M. H. Hou & S. I. Allakhverdiev (Eds.), Photosynthesis (Vol. 3, pp. 33–48). https://doi.org/10.1016/b978-0-323-98391-4.00021-6 Taniguchi, M., LaRocca, C. A., Bernat, J. D., & Lindsey, J. S. (2023). [Review of Digital Database of Absorption Spectra of Diverse Flavonoids Enables Structural Comparisons and Quantitative Evaluations]. JOURNAL OF NATURAL PRODUCTS, 86(4), 1087–1119. https://doi.org/10.1021/acs.jnatprod.2c00720 Taniguchi, M., Wu, Z., Sterling, C., Lindsey, J. S., Raghavachari, R., & Berezin, M. Y. (2023). Digitization of print-based absorption and fluorescence spectra extracting clarity from clutter. REPORTERS, MARKERS, DYES, NANOPARTICLES, AND MOLECULAR PROBES FOR BIOMEDICAL APPLICATIONS XIV, Vol. 12398. https://doi.org/10.1117/12.2651694 Jing, H., Magdaong, N. C. M., Diers, J. R., Kirmaier, C., Bocian, D. F., Holten, D., & Lindsey, J. S. (2023, January 5). Dyads with tunable near-infrared donor-acceptor excited-state energy gaps: molecular design and Forster analysis for ultrafast energy transfer. PHYSICAL CHEMISTRY CHEMICAL PHYSICS, Vol. 1. https://doi.org/10.1039/d2cp04689j Nguyen, K. C., Tran, A. T. N., Wang, P., Zhang, S., Wu, Z., Taniguchi, M., & Lindsey, J. S. (2023). Four Routes to 3-(3-Methoxy-1,3-dioxopropyl)pyrrole, a Core Motif of Rings C and E in Photosynthetic Tetrapyrroles. MOLECULES, 28(3). https://doi.org/10.3390/molecules28031323 Sato, D., Wu, Z., Dou, J., Son, J., & Lindsey, J. S. S. (2023). Indoxyl-glucosides bearing tethers for enzymatically triggered cross-linking. NEW JOURNAL OF CHEMISTRY, 47(17), 8223–8242. https://doi.org/10.1039/d2nj06267d Jing, H., Magdaong, N. C. M., Diers, J. R., Kirmaier, C., Bocian, D. F., Holten, D., & Lindsey, J. S. (2023, January 4). Investigation of a bacteriochlorin-containing pentad array for panchromatic light-harvesting and charge separation. PHYSICAL CHEMISTRY CHEMICAL PHYSICS, Vol. 1. https://doi.org/10.1039/d2cp05400k Liu, Q., Taniguchi, M., Goel, S., & Lindsey, J. S. (2024, April). Rapid screening of dyes for self-aggregation, adsorption and metabolic integrity - Quantitative metrics as a prelude to biological studies. DYES AND PIGMENTS, Vol. 223. https://doi.org/10.1016/j.dyepig.2023.111914 Nguyen, K. C., & Lindsey, J. S. (2023, July 20). Synthesis of a BC-Dihydrodipyrrin Building Block of Bacteriochlorophyll a. JOURNAL OF ORGANIC CHEMISTRY, Vol. 7. https://doi.org/10.1021/acs.joc.3c01216 Nguyen Tran, A. T., Wu, Z., Chung, D. T. M., Nalaoh, P., & Lindsey, J. S. (2023, July 5). Synthesis of model southern rim structures of photosynthetic tetrapyrroles and phyllobilins. NEW JOURNAL OF CHEMISTRY, Vol. 7. https://doi.org/10.1039/d3nj02515b Nguyen, K.-U., Zhang, Y., Liu, Q., Zhang, R., Jin, X., Taniguchi, M., … Lindsey, J. S. (2023). [Review of Tolyporphins-Exotic Tetrapyrrole Pigments in a Cyanobacterium-A Review]. MOLECULES, 28(16). https://doi.org/10.3390/molecules28166132 Roy, A., Magdaong, N. C. M., Jing, H., Rong, J., Diers, J. R., Kang, H. S., … Holten, D. (2022, December 12). Balancing Panchromatic Absorption and Multistep Charge Separation in a Compact Molecular Architecture br. JOURNAL OF PHYSICAL CHEMISTRY A, Vol. 12. https://doi.org/10.1021/acs.jpca.2c06040 Taniguchi, M., Bocian, D. F., Holten, D., & Lindsey, J. S. (2022). Beyond green with synthetic chlorophylls - Connecting structural features with spectral properties. JOURNAL OF PHOTOCHEMISTRY AND PHOTOBIOLOGY C-PHOTOCHEMISTRY REVIEWS, 52. https://doi.org/10.1016/j.jphotochemrev.2022.100513 Taniguchi, M., Taniguchi, M., Zhang, R., Goto, R., & Lindsey, J. S. (2022). Chasing the green echiuran worm Bonellia in tidal pools of Okinawa. FRONTIERS IN BIOLOGICAL DETECTION: FROM NANOSENSORS TO SYSTEMS XIV, Vol. 11979. https://doi.org/10.1117/12.2608722 Jing, H., Liu, S., Jiang, J., Tran, V.-P., Rong, J., Wang, P., & Lindsey, J. S. (2022). Meso bromination and derivatization of synthetic bacteriochlorins. NEW JOURNAL OF CHEMISTRY, 46(12), 5556–5572. https://doi.org/10.1039/d1nj05853c Liu, R., Rong, J., Wu, Z., Taniguchi, M., Bocian, D. F., Holten, D., & Lindsey, J. S. (2022). Panchromatic Absorbers Tethered for Bioconjugation or Surface Attachment. MOLECULES, 27(19). https://doi.org/10.3390/molecules27196501 Jing, H., Rong, J., Taniguchi, M., & Lindsey, J. S. (2022). [Review of Phenylene-linked tetrapyrrole arrays containing free base and diverse metal chelate forms - Versatile synthetic architectures for catalysis and artificial photosynthesis]. COORDINATION CHEMISTRY REVIEWS, 456. https://doi.org/10.1016/j.ccr.2021.214278 Karg, C. A., Taniguchi, M., Lindsey, J. S., & Moser, S. (2022, December 8). Phyllobilins - Bioactive Natural Products Derived from Chlorophyll - Plant Origins, Structures, Absorption Spectra, and Biomedical Properties. PLANTA MEDICA, Vol. 12. https://doi.org/10.1055/a-1955-4624 Magdaong, N. C. M., Jing, H., Diers, J. R., Kirmaier, C., Lindsey, J. S., Bocian, D. F., & Holten, D. (2022). Probing the Effects of Electronic-Vibrational Resonance on the Rate of Excited-State Energy Transfer in Bacteriochlorin Dyads. JOURNAL OF PHYSICAL CHEMISTRY LETTERS, 13(34), 7906–7910. https://doi.org/10.1021/acs.jpclett.2c02154 Siwawannapong, K., Nemeth, A. M., Melander, R. J., Rong, J., Davis, J. R., Taniguchi, M., … Melander, C. (2022, July 8). Simple Dipyrrin Analogues of Prodigiosin for Use as Colistin Adjuvants. CHEMMEDCHEM, Vol. 7. https://doi.org/10.1002/cmdc.202200286 Sun, R., Liu, M., Wang, P., Qin, Y., Schnedermann, C., Maher, A. G., … Nocera, D. G. (2022). Syntheses and Properties of Metalated Tetradehydrocorrins. INORGANIC CHEMISTRY, 61(31), 12308–12317. https://doi.org/10.1021/acs.inorgchem.2c01642 Jing, H., Wang, P., Chen, B., Jiang, J., Vairaprakash, P., Liu, S., … Lindsey, J. S. (2022, March 2). Synthesis of bacteriochlorins bearing diverse beta-substituents. NEW JOURNAL OF CHEMISTRY, Vol. 3. https://doi.org/10.1039/d1nj05852e Wu, Z., Dou, J., Nguyen, K.-U., Eppley, J. C., Siwawannapong, K., Zhang, Y., & Lindsey, J. S. (2022). Tailoring the AIE Chromogen 2-(2-Hydroxyphenyl)benzothiazole for Use in Enzyme-Triggered Molecular Brachytherapy. MOLECULES, 27(24). https://doi.org/10.3390/molecules27248682 Diers, J. R., Kirmaier, C., Taniguchi, M., Lindsey, J. S., Bocian, D. F., & Holten, D. (2021, September 7). A perspective on the redox properties of tetrapyrrole macrocycles. PHYSICAL CHEMISTRY CHEMICAL PHYSICS, Vol. 9. https://doi.org/10.1039/d1cp01943k Taniguchi, M., Lindsey, J. S., Bocian, D. F., & Holten, D. (2021). [Review of Comprehensive review of photophysical parameters (epsilon, Phi(f), tau(s)) of tetraphenylporphyrin (H2TPP) and zinc tetraphenylporphyrin (ZnTPP) - Critical benchmark molecules in photochemistry and photosynthesis]. JOURNAL OF PHOTOCHEMISTRY AND PHOTOBIOLOGY C-PHOTOCHEMISTRY REVIEWS, 46, 100401. https://doi.org/10.1016/j.jphotochemrev.2020.100401 Lindsey, J. S. (2021, June 22). Considerations of the biosynthesis and molecular diversity of tolyporphins. NEW JOURNAL OF CHEMISTRY, Vol. 6. https://doi.org/10.1039/d1nj01761f Rong, J., Magdaong, N. C. M., Taniguchi, M., Diers, J. R., Niedzwiedzki, D. M., Kirmaier, C., … Holten, D. (2021). Electronic Structure and Excited-State Dynamics of Rylene-Tetrapyrrole Panchromatic Absorbers. JOURNAL OF PHYSICAL CHEMISTRY A, 125(36), 7900–7919. https://doi.org/10.1021/acs.jpca.1c05771 Nguyen, K.-U., Zhang, R., Taniguchi, M., & Lindsey, J. S. (2021, July 16). Fluorescence Assay for Tolyporphins Amidst Abundant Chlorophyll in Crude Cyanobacterial Extracts. PHOTOCHEMISTRY AND PHOTOBIOLOGY, Vol. 7. https://doi.org/10.1111/php.13474 Jin, X., Zhang, Y., Zhang, R., Nguyen, K.-U., Lindsey, J. S., & Miller, E. S. (2021). Identification of Putative Biosynthetic Gene Clusters for Tolyporphins in Multiple Filamentous Cyanobacteria. LIFE-BASEL, 11(8). https://doi.org/10.3390/life11080758 Magdaong, N. C. M., Buhrmaster, J. C., Faries, K. M., Liu, H., Tira, G. A., Lindsey, J. S., … Kirmaier, C. (2021). In Situ, Protein-Mediated Generation of a Photochemically Active Chlorophyll Analogue in a Mutant Bacterial Photosynthetic Reaction Center. BIOCHEMISTRY, 60(16), 1260–1275. https://doi.org/10.1021/acs.biochem.1c00137 Jin, X., Miller, E. S., & Lindsey, J. S. (2021). Natural Product Gene Clusters in the Filamentous Nostocales Cyanobacterium HT-58-2. LIFE-BASEL, 11(4). https://doi.org/10.3390/life11040356 Liu, S., Rong, J., Liu, R., & Lindsey, J. S. (2021). Single-Fluorophore Single-Chain Nanoparticle Undergoes Fluorophore-Driven Assembly with Fluorescence Features Retained in Physiological Milieu. ACS APPLIED POLYMER MATERIALS, 3(4), 1767–1776. https://doi.org/10.1021/acsapm.0c01313 Wang, P., & Lindsey, J. S. (2021). Synthesis of AD-Dihydrodipyrrins Equipped with Latent Substituents of Native Chlorophylls and Bacteriochlorophylls. JOURNAL OF ORGANIC CHEMISTRY, 86(17), 11794–11811. https://doi.org/10.1021/acs.joc.1c01239 Chung, D. T. M., Tran, P. V., Chau Nguyen, K., Wang, P., & Lindsey, J. S. (2021, July 8). Synthesis of model bacteriochlorophylls containing substituents of native rings A, C and E. NEW JOURNAL OF CHEMISTRY, Vol. 7. https://doi.org/10.1039/d1nj02469h Timothy J. O'Donnell, Gurr, J. R., Dai, J., Taniguchi, M., Williams, P. G., & Lindsey, J. S. (2021, June 8). Tolyporphins A-R, unusual tetrapyrrole macrocycles in a cyanobacterium from Micronesia, assessed quantitatively from the culture HT-58-2. NEW JOURNAL OF CHEMISTRY, Vol. 6. https://doi.org/10.1039/d1nj02108g Taniguchi, M., & Lindsey, J. S. (2021). Absorption and Fluorescence Spectral Database of Chlorophylls and Analogues. PHOTOCHEMISTRY AND PHOTOBIOLOGY, 97(1), 136–165. https://doi.org/10.1111/php.13319 Taniguchi, M., & Lindsey, J. S. (2020). Absorption and fluorescence spectra of organic compounds from 40 sources - archives, repositories, databases, and literature search engines. REPORTERS, MARKERS, DYES, NANOPARTICLES, AND MOLECULAR PROBES FOR BIOMEDICAL APPLICATIONS XII, Vol. 11256. https://doi.org/10.1117/12.2542859 Cao, Y., Mehta, H., Norcross, A. E., Taniguchi, M., & Lindsey, J. S. (2020). Analysis of Wikipedia pageviews to identify popular chemicals. REPORTERS, MARKERS, DYES, NANOPARTICLES, AND MOLECULAR PROBES FOR BIOMEDICAL APPLICATIONS XII, Vol. 11256. https://doi.org/10.1117/12.2542835 Fujita, H., Zhang, Y., Wu, Z., & Lindsey, J. S. (2020). Chromogenic agents built around a multifunctional double-triazine framework for enzymatically triggered cross-linking under physiological conditions. NEW JOURNAL OF CHEMISTRY, 44(10), 3856–3867. https://doi.org/10.1039/c9nj06187h Donal F. O'shea, Sommer, R. D., Taniguchi, M., & Lindsey, J. S. (2020). Crystal Structure of 1,9-Dibromo-5-phenyldipyrrin, Tetrapyrrole Synthesis Derivative and Free Base Ligand of BODIPY Building Blocks. X-RAY STRUCTURE ANALYSIS ONLINE, 36, 21–22. https://doi.org/10.2116/xraystruct.36.21 Zhang, Y., Wu, Z., Takashima, I., Nguyen, K.-U., Matsumoto, N., & Lindsey, J. S. (2020). Engineering of an archaeal phosphodiesterase to trigger aggregation-induced emission (AIE) of synthetic substrates. NEW JOURNAL OF CHEMISTRY, 44(33), 14266–14277. https://doi.org/10.1039/d0nj03208e Nalaoh, P., Bureekaew, S., Promaraka, V., & Lindsey, J. S. (2020). Fourfold alkyl wrapping of a copper(II) porphyrin thwarts macrocycle pi-pi stacking in a compact supramolecular package. ACTA CRYSTALLOGRAPHICA SECTION C-STRUCTURAL CHEMISTRY, 76, 647-+. https://doi.org/10.1107/S2053229620007172 Magdaong, N. C. M., Taniguchi, M., Diers, J. R., Niedzwiedzki, D. M., Kirmaier, C., Lindsey, J. S., … Holten, D. (2020). Photophysical Properties and Electronic Structure of Zinc(II) Porphyrins Bearing 0-4 meso-Phenyl Substituents: Zinc Porphine to Zinc Tetraphenylporphyrin (ZnTPP). JOURNAL OF PHYSICAL CHEMISTRY A, 124(38), 7776–7794. https://doi.org/10.1021/acs.jpca.0c06841 Wang, P., & Lindsey, J. S. (2020). [Review of Riley Oxidation of Heterocyclic Intermediates on Paths to Hydroporphyrins-A Review]. MOLECULES, 25(8). https://doi.org/10.3390/molecules25081858 Nguyen, K. C., Wang, P., & Lindsey, J. S. (2021). Study of conditions for streamlined assembly of a model bacteriochlorophyll from two dihydrodipyrrin halves. NEW JOURNAL OF CHEMISTRY, 45(2), 569–581. https://doi.org/10.1039/d0nj04855k Fujita, H., Jing, H., Krayer, M., Allu, S., Veeraraghavaiah, G., Wu, Z., … Lindsey, J. S. (2019). Annulated bacteriochlorins for near- infrared photophysical studies. NEW JOURNAL OF CHEMISTRY, 43(19), 7209–7232. https://doi.org/10.1039/c9nj01113g Ballatore, M. B., Milanesio, M. E., Fujita, H., Lindsey, J. S., & Durantini, E. N. (2020). Bacteriochlorin-bis(spermine) conjugate affords an effective photodynamic action to eradicate microorganisms. JOURNAL OF BIOPHOTONICS, 13(2). https://doi.org/10.1002/jbio.201960061 Matsumoto, N., Taniguchi, M., & Lindsey, J. S. (2020). Bioconjugatable synthetic chlorins rendered water-soluble with three PEG-12 groups via click chemistry. JOURNAL OF PORPHYRINS AND PHTHALOCYANINES, 24(1-3), 362–378. https://doi.org/10.1142/S1088424619501219 Barnhart-Dailey, M., Zhang, Y., Zhang, R., Anthony, S. M., Aaron, J. S., Miller, E. S., … Timlin, J. A. (2019). Cellular localization of tolyporphins, unusual tetrapyrroles, in a microbial photosynthetic community determined using hyperspectral confocal fluorescence microscopy. Photosynthesis Research, 141(3), 259–271. https://doi.org/10.1007/s11120-019-00625-w Guo, Y., Xu, Z., Norcross, A. E., Taniguchi, M., & Lindsey, J. S. (2019). Developing a user community in the photosciences: a website for spectral data and access to PhotochemCAD (S. Achilefu & R. Raghavachari, Eds.). REPORTERS, MARKERS, DYES, NANOPARTICLES, AND MOLECULAR PROBES FOR BIOMEDICAL APPLICATIONS XI, Vol. 10893. https://doi.org/10.1117/12.2508077 Fujita, H., Dou, J., Matsumoto, N., Wu, Z., & Lindsey, J. S. (2020). Enzymatically triggered chromogenic cross-linking agents under physiological conditions. NEW JOURNAL OF CHEMISTRY, 44(3), 719–743. https://doi.org/10.1039/c9nj04126e Qi, Q., Taniguchi, M., & Lindsey, J. S. (2019). Heuristics from Modeling of Spectral Overlap in Forster Resonance Energy Transfer (FRET). JOURNAL OF CHEMICAL INFORMATION AND MODELING, 59(2), 652–667. https://doi.org/10.1021/acs.jcim.8b00753 Wu, Z., Fujita, H., Magdaong, N. C. M., Diers, J. R., Hood, D., Allu, S., … Lindsey, J. S. (2019). New molecular design for blue BODIPYs. NEW JOURNAL OF CHEMISTRY, 43(19), 7233–7242. https://doi.org/10.1039/c9nj01114e Liu, R., Vairaprakash, P., & Lindsey, J. S. (2019). Self-assembly with fluorescence readout in a free base dipyrrin-polymer triggered by metal ion binding in aqueous solution. NEW JOURNAL OF CHEMISTRY, 43(24), 9711–9724. https://doi.org/10.1039/c9nj01787a Wang, P., Nguyen, K. C., & Lindsey, J. S. (2019). Synthesis of the Ring C Pyrrole of Native Chlorophylls and Bacteriochlorophylls. JOURNAL OF ORGANIC CHEMISTRY, 84(17), 11286–11293. https://doi.org/10.1021/acs.joc.9b01650 Wang, P., Lu, F., & Lindsey, J. S. (2020). Use of the Nascent Isocyclic Ring to Anchor Assembly of the Full Skeleton of Model Chlorophylls. JOURNAL OF ORGANIC CHEMISTRY, 85(2), 702–715. https://doi.org/10.1021/acs.joc.9b02770 Hood, D., Sahin, T., Parkes-Loach, P. S., Jiao, J., Harris, M. A., Dilbeck, P., … Holten, D. (2018). Expanding Covalent Attachment Sites of Nonnative Chromophores to Encompass the C-Terminal Hydrophilic Domain in Biohybrid Light-Harvesting Architectures. CHEMPHOTOCHEM, 2(3), 300–313. https://doi.org/10.1002/cptc.201700182 Hughes, R.-A., Jin, X., Zhang, Y., Zhang, R., Tran, S., Williams, P. G., … Miller, E. S. (2018). Genome sequence, metabolic properties and cyanobacterial attachment of Porphyrobacter sp. HT-58-2 isolated from a filamentous cyanobacterium–microbial consortium. Microbiology, 164(10), 1229–1239. https://doi.org/10.1099/mic.0.000706 Yuen, J. M., Diers, J. R., Alexy, E. J., Roy, A., Mandal, A. K., Kang, H. S., … Holten, D. (2018). Origin of Panchromaticity in Multichromophore-Tetrapyrrole Arrays. JOURNAL OF PHYSICAL CHEMISTRY A, 122(36), 7181–7201. https://doi.org/10.1021/acs.jpca.8b06815 Taniguchi, M., Hu, G., Liu, R., Du, H., & Lindsey, J. S. (2018). Red and near-infrared fluorophores inspired by chlorophylls. Consideration of practical brightness in multicolor flow cytometry and biomedical sciences (S. Achilefu & R. Raghavachari, Eds.). REPORTERS, MARKERS, DYES, NANOPARTICLES, AND MOLECULAR PROBES FOR BIOMEDICAL APPLICATIONS X, Vol. 10508. https://doi.org/10.1117/12.2302709 Liu, R., & Lindsey, J. S. (2019). Single-Polymer-Single-Cargo Strategy Packages Hydrophobic Fluorophores in Aqueous Solution with Retention of Inherent Brightness. ACS MACRO LETTERS, 8(1), 79–83. https://doi.org/10.1021/acsmacrolett.8b00907 Hu, G., Kang, H. S., Mandal, A. K., Roy, A., Kirmaier, C., Bocian, D. F., … Lindsey, J. S. (2018). Synthesis of arrays containing porphyrin, chlorin, and perylene-imide constituents for panchromatic light-harvesting and charge separation. RSC ADVANCES, 8(42), 23854–23874. https://doi.org/10.1039/c8ra04052d Liu, Y., Zhang, S., & Lindsey, J. S. (2018). [Review of Total synthesis campaigns toward chlorophylls and related natural hydroporphyrins - diverse macrocycles, unrealized opportunities]. NATURAL PRODUCT REPORTS, 35(9), 879–901. https://doi.org/10.1039/c8np00020d Jiang, J., Matula, A. J., Swierk, J. R., Romano, N., Wu, Y., Batista, V. S., … Brudvig, G. W. (2018). Unusual Stability of a Bacteriochlorin Electrocatalyst under Reductive Conditions. A Case Study on CO2 Conversion to CO. ACS CATALYSIS, 8(11), 10131–10136. https://doi.org/10.1021/acscatal.8b02991 Jiao, J., Yu, M., Holten, D., Lindsey, J. S., & Bocian, D. F. (2017). Characterization of Hydroporphyrins Covalently Attached to Si(100). JOURNAL OF PORPHYRINS AND PHTHALOCYANINES, 21(7-8), 453–464. https://doi.org/10.1142/s1088424617500547 Zhang, S., & Lindsey, J. S. (2017). Construction of the Bacteriochlorin Macrocycle with Concomitant Nazarov Cyclization To Form the Annulated Isocyclic Ring: Analogues of Bacteriochlorophyll a. JOURNAL OF ORGANIC CHEMISTRY, 82(5), 2489–2504. https://doi.org/10.1021/acs.joc.6b02878 Taniguchi, M., & Lindsey, J. S. (2018). Database of Absorption and Fluorescence Spectra of > 300 Common Compounds for use in PhotochemCAD. PHOTOCHEMISTRY AND PHOTOBIOLOGY, 94(2), 290–327. https://doi.org/10.1111/php.12860 Hughes, R.-A., Zhang, Y., Zhang, R., Williams, P. G., Lindsey, J. S., & Miller, E. S. (2017). Genome Sequence and Composition of a Tolyporphin-Producing Cyanobacterium-Microbial Community. APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 83(19). https://doi.org/10.1128/aem.01068-17 Maher, A. G., Passard, G., Dogutan, D. K., Halbach, R. L., Anderson, B. L., Gagliardi, C. J., … Nocera, D. G. (2017). Hydrogen Evolution Catalysis by a Sparsely Substituted Cobalt Chlorin. ACS CATALYSIS, 7(5), 3597–3606. https://doi.org/10.1021/acscatal.7b00969 Zhang, Y., Zhang, R., Nazari, M., Bagley, M. C., Miller, E. S., Williams, P. G., … Lindsey, J. S. (2017). Mass spectrometric detection of chlorophyll a and the tetrapyrrole secondary metabolite tolyporphin A in the filamentous cyanobacterium HT-58-2. Approaches to high-throughput screening of intact cyanobacteria. JOURNAL OF PORPHYRINS AND PHTHALOCYANINES, 21(11), 759–768. https://doi.org/10.1142/s108842461750078x Taniguchi, M., Du, H., & Lindsey, J. S. (2018). PhotochemCAD 3: Diverse Modules for Photophysical Calculations with Multiple Spectral Databases. PHOTOCHEMISTRY AND PHOTOBIOLOGY, 94(2), 277–289. https://doi.org/10.1111/php.12862 Zhang, Y., Zhang, R., Hughes, R.-A., Dai, J., Gurr, J. R., Williams, P. G., … Lindsey, J. S. (2017). Quantitation of Tolyporphins, Diverse Tetrapyrrole Secondary Metabolites with Chlorophyll-Like Absorption, from a Filamentous Cyanobacterium-Microbial Community. Phytochemical Analysis, 29(2), 205–216. https://doi.org/10.1002/pca.2735 Liu, Y., Allu, S., Reddy, M. N., Hood, D., Diers, J. R., Bocian, D. F., … Lindsey, J. S. (2017). Synthesis and photophysical characterization of bacteriochlorins equipped with integral swallowtail substituents. NEW JOURNAL OF CHEMISTRY, 41(11), 4360–4376. https://doi.org/10.1039/c7nj00499k Zhang, S. F., Reddy, M. N., Mass, O., Kim, H. J., Hu, G. F., & Lindsey, J. (2017). Synthesis of tailored hydrodipyrrins and their examination in directed routes to bacteriochlorins and tetradehydrocorrins. New Journal of Chemistry, 41(19), 11170–11189. https://doi.org/10.1039/c7nj01892d Liu, M., Chen, C.-Y., Hood, D., Taniguchi, M., Diers, J. R., Bocian, D. F., … Lindsey, J. S. (2017). Synthesis, photophysics and electronic structure of oxobacteriochlorins. NEW JOURNAL OF CHEMISTRY, 41(10), 3732–3744. https://doi.org/10.1039/c6nj04135c Mandal, A. K., Diers, J. R., Niedzwiedzki, D. M., Hu, G., Liu, R., Alexy, E. J., … Holten, D. (2017). Tailoring Panchromatic Absorption and Excited-State Dynamics of Tetrapyrrole–Chromophore (Bodipy, Rylene) Arrays—Interplay of Orbital Mixing and Configuration Interaction. Journal of the American Chemical Society, 139(48), 17547–17564. https://doi.org/10.1021/JACS.7B09548 Zhang, N., Jiang, J., Liu, M., Taniguchi, M., Mandal, A. K., Evans-Storms, R. B., … Lindsey, J. S. (2016). Bioconjugatable, PEGylated hydroporphyrins for photochemistry and photomedicine. Narrow-band, near-infrared-emitting bacteriochlorins. NEW JOURNAL OF CHEMISTRY, 40(9), 7750–7767. https://doi.org/10.1039/c6nj01155a Liu, M., Chen, C.-Y., Mandal, A. K., Chandrashaker, V., Evans-Storms, R. B., Pitner, J. B., … Lindsey, J. S. (2016). Bioconjugatable, PEGylated hydroporphyrins for photochemistry and photomedicine. Narrow-band, red-emitting chlorins. NEW JOURNAL OF CHEMISTRY, 40(9), 7721–7740. https://doi.org/10.1039/c6nj01154c Deans, R. M., Taniguchi, M., Chandrashaker, V., Ptaszek, M., & Lindsey, J. S. (2016). Complexity in structure-directed prebiotic chemistry. Reaction bifurcation from a beta-diketone in tetrapyrrole formation. NEW JOURNAL OF CHEMISTRY, 40(7), 6434–6440. https://doi.org/10.1039/c6nj00545d Deans, R. M., Taniguchi, M., Chandrashaker, V., Ptaszek, M., Chambers, D. R., Soares, A. R. M., & Lindsey, J. S. (2016). Complexity in structure-directed prebiotic chemistry. Unexpected compositional richness from competing reactants in tetrapyrrole formation. NEW JOURNAL OF CHEMISTRY, 40(7), 6421–6433. https://doi.org/10.1039/c6nj00543h Liu, Y., & Lindsey, J. S. (2016). Northern-Southern Route to Synthetic Bacteriochlorins. JOURNAL OF ORGANIC CHEMISTRY, 81(23), 11882–11897. https://doi.org/10.1021/acs.joc.6b02334 Hu, G., Liu, R., Alexy, E. J., Mandal, A. K., Bocian, D. F., Holten, D., & Lindsey, J. S. (2016). Panchromatic chromophore–tetrapyrrole light-harvesting arrays constructed from Bodipy, perylene, terrylene, porphyrin, chlorin, and bacteriochlorin building blocks. New Journal of Chemistry, 40(9), 8032–8052. https://doi.org/10.1039/C6NJ01782G Mandal, A. K., Taniguchi, M., Diers, J. R., Niedzwiedzki, D. M., Kirmaier, C., Lindsey, J. S., … Holten, D. (2016). Photophysical Properties and Electronic Structure of Porphyrins Bearing Zero to Four meso-Phenyl Substituents: New Insights into Seemingly Well Understood Tetrapyrroles. JOURNAL OF PHYSICAL CHEMISTRY A, 120(49), 9719–9731. https://doi.org/10.1021/acs.jpca.6b09483 Mandal, A. K., Sahin, T., Liu, M., Lindsey, J. S., Bocian, D. F., & Holten, D. (2016). Photophysical comparisons of PEGylated porphyrins, chlorins and bacteriochlorins in water. NEW JOURNAL OF CHEMISTRY, 40(11), 9648–9656. https://doi.org/10.1039/c6nj02091g Taniguchi, M., Deans, R. M., Chandrashaker, V., Ptaszek, M., & Lindsey, J. S. (2016). Scope and limitations of two model prebiotic routes to tetrapyrrole macrocycles. NEW JOURNAL OF CHEMISTRY, 40(9), 7445–7455. https://doi.org/10.1039/c6nj01423b Zhang, S., Kim, H.-J., Tang, Q., Yang, E., Bocian, D. F., Holten, D., & Lindsey, J. S. (2016, July 1). Synthesis and photophysical characteristics of 2,3,12,13-tetraalkylbacteriochlorins. NEW JOURNAL OF CHEMISTRY, Vol. 40, pp. 5942–5956. https://doi.org/10.1039/c6nj00517a Chandrashaker, V., Ptaszek, M., Taniguchi, M., & Lindsey, J. S. (2016). Synthesis of diverse acyclic precursors to pyrroles for studies of prebiotic routes to tetrapyrrole macrocycles. NEW JOURNAL OF CHEMISTRY, 40(10), 8786–8808. https://doi.org/10.1039/c6nj02048h Taniguchi, M., & Lindsey, J. S. (2017). [Review of Synthetic Chlorins, Possible Surrogates for Chlorophylls, Prepared by Derivatization of Porphyrins]. CHEMICAL REVIEWS, 117(2), 344–535. https://doi.org/10.1021/acs.chemrev.5b00696 Taniguchi, M., Ptaszek, M., Chandrashaker, V., & Lindsey, J. S. (2017). The Porphobilinogen Conundrum in Prebiotic Routes to Tetrapyrrole Macrocycles. ORIGINS OF LIFE AND EVOLUTION OF BIOSPHERES, 47(1), 93–119. https://doi.org/10.1007/s11084-016-9506-1 Amanpour, J., Hu, G., Alexy, E. J., Mandal, A. K., Kang, H. S., Yuen, J. M., … Holten, D. (2016). Tuning the Electronic Structure and Properties of Perylene-Porphyrin-Perylene Panchromatic Absorbers. JOURNAL OF PHYSICAL CHEMISTRY A, 120(38), 7434–7450. https://doi.org/10.1021/acs.jpca.6b06857 Deans, R. M., Chandrashaker, V., Taniguchi, M., & Lindsey, J. S. (2015). Complexity in structure-directed prebiotic chemistry. Effect of a defective competing reactant in tetrapyrrole formation. NEW JOURNAL OF CHEMISTRY, 39(11), 8273–8281. https://doi.org/10.1039/c5nj01474c Lindsey, J. S. (2015). [Review of De Novo Synthesis of Gem-Dialkyl Chlorophyll Analogues for Probing and Emulating Our Green World]. CHEMICAL REVIEWS, 115(13), 6534–6620. https://doi.org/10.1021/acs.chemrev.5b00065 Zhang, N., Reddy, K. R., Jiang, J., Taniguchi, M., Sommer, R. D., & Lindsey, J. S. (2015). Elaboration of an unexplored substitution site in synthetic bacteriochlorins. JOURNAL OF PORPHYRINS AND PHTHALOCYANINES, 19(7), 887–902. https://doi.org/10.1142/s1088424615500534 Vairaprakash, P., Yang, E., Sahin, T., Taniguchi, M., Krayer, M., Diers, J. R., … Holten, D. (2015). Extending the Short and Long Wavelength Limits of Bacteriochlorin Near-Infrared Absorption via Dioxo- and Bisimide-Functionalization. JOURNAL OF PHYSICAL CHEMISTRY B, 119(12), 4382–4395. https://doi.org/10.1021/jp512818g Sahin, T., Vairaprakash, P., Borbas, K. E., Balasubramanian, T., & Lindsey, J. S. (2015). Hydrophilic bioconjugatable trans-AB-porphyrins and peptide conjugates. JOURNAL OF PORPHYRINS AND PHTHALOCYANINES, 19(5), 663–678. https://doi.org/10.1142/s1088424615500121 Jiang, J., Taniguchi, M., & Lindsey, J. S. (2015). Near-infrared tunable bacteriochlorins equipped for bioorthogonal labeling. NEW JOURNAL OF CHEMISTRY, 39(6), 4534–4550. https://doi.org/10.1039/c5nj00209e Alexy, E. J., Hintz, C. W., Hughes, H. M., Taniguchi, M., & Lindsey, J. S. (2015). Paley's watchmaker analogy and prebiotic synthetic chemistry in surfactant assemblies. Formaldehyde scavenging by pyrroles leading to porphyrins as a case study. ORGANIC & BIOMOLECULAR CHEMISTRY, 13(39), 10025–10031. https://doi.org/10.1039/c5ob01409c Faries, K. M., Diers, J. R., Springer, J. W., Yang, E., Ptaszek, M., Lahaye, D., … Holten, D. (2015). Photophysical Properties and Electronic Structure of Chlorin-Imides: Bridging the Gap between Chlorins and Bacteriochlorins. JOURNAL OF PHYSICAL CHEMISTRY B, 119(24), 7503–7515. https://doi.org/10.1021/jp511257w Ra, D., Gauger, K. A., Muthukumaran, K., Balasubramanian, T., Chandrashaker, V., Taniguchi, M., … Lindsey, J. S. (2015). Progress towards synthetic chlorins with graded polarity, conjugatable substituents, and wavelength tunability. JOURNAL OF PORPHYRINS AND PHTHALOCYANINES, 19(4), 547–572. https://doi.org/10.1142/s1088424615500042 Sahin, T., Harris, M. A., Vairaprakash, P., Niedzwiedzki, D. M., Subramanian, V., Shreve, A. P., … Lindsey, J. S. (2015). Self-Assembled Light-Harvesting System from Chromophores in Lipid Vesicles. JOURNAL OF PHYSICAL CHEMISTRY B, 119(32), 10231–10243. https://doi.org/10.1021/acs.jpcb.5b04841 Jiang, J., Yang, E., Reddy, K. R., Niedzwiedzki, D. M., Kirmaier, C., Bocian, D. F., … Lindsey, J. S. (2015). Synthetic bacteriochlorins bearing polar motifs (carboxylate, phosphonate, ammonium and a short PEG). Water-solubilization, bioconjugation, and photophysical properties. NEW JOURNAL OF CHEMISTRY, 39(7), 5694–5714. https://doi.org/10.1039/c5nj00759c Jiang, J., Reddy, K. R., Pavan, M. P., Lubian, E., Harris, M. A., Jiao, J., … Lindsey, J. S. (2014). Amphiphilic, hydrophilic, or hydrophobic synthetic bacteriochlorins in biohybrid light-harvesting architectures: consideration of molecular designs. PHOTOSYNTHESIS RESEARCH, 122(2), 187–202. https://doi.org/10.1007/s11120-014-0021-9 Yuen, J. M., Harris, M. A., Liu, M., Diers, J. R., Kirmaier, C., Bocian, D. F., … Holten, D. (2015). Effects of Substituents on Synthetic Analogs of Chlorophylls. Part 4: How Formyl Group Location Dictates the Spectral Properties of Chlorophylls b, d and f. PHOTOCHEMISTRY AND PHOTOBIOLOGY, 91(2), 331–342. https://doi.org/10.1111/php.12401 Harris, M. A., Sahin, T., Jiang, J., Vairaprakash, P., Parkes-Loach, P. S., Niedzwiedzki, D. M., … Lindsey, J. S. (2014). Enhanced Light-Harvesting Capacity by Micellar Assembly of Free Accessory Chromophores and LH1-like Antennas. PHOTOCHEMISTRY AND PHOTOBIOLOGY, 90(6), 1264–1276. https://doi.org/10.1111/php.12319 Chen, C.-Y., Taniguchi, M., & Lindsey, J. S. (2014). NMR spectral properties of 16 synthetic bacteriochlorins with site-specific C-13 or N-15 substitution. JOURNAL OF PORPHYRINS AND PHTHALOCYANINES, 18(6), 433–456. https://doi.org/10.1142/s1088424614500199 Alexy, E. J., Yuen, J. M., Chandrashaker, V., Diers, J. R., Kirmaier, C., Bocian, D. F., … Lindsey, J. S. (2014). Panchromatic absorbers for solar light-harvesting. CHEMICAL COMMUNICATIONS, 50(93), 14512–14515. https://doi.org/10.1039/c4cc06853j Springer, J. W., Taniguchi, M., Krayer, M., Ruzié, C., Diers, J. R., Niedzwiedzki, D. M., … Holten, D. (2014). Photophysical properties and electronic structure of retinylidene–chlorin–chalcones and analogues. Photochemical & Photobiological Sciences, 13(4), 634. https://doi.org/10.1039/C3PP50421B Jiang, J., Chen, C.-Y., Zhang, N., Vairaprakash, P., & Lindsey, J. S. (2015). Polarity-tunable and wavelength-tunable bacteriochlorins bearing a single carboxylic acid or NHS ester. Use in a protein bioconjugation model system. NEW JOURNAL OF CHEMISTRY, 39(1), 403–419. https://doi.org/10.1039/c4nj01340a Yang, E., Wang, J., Diers, J. R., Niedzwiedzki, D. M., Kirmaier, C., Bocian, D. F., … Holten, D. (2014). Probing Electronic Communication for Efficient Light-Harvesting Functionality: Dyads Containing a Common Perylene and a Porphyrin, Chlorin, or Bacteriochlorin. JOURNAL OF PHYSICAL CHEMISTRY B, 118(6), 1630–1647. https://doi.org/10.1021/jp411629m Liu, M., Ptaszek, M., Mass, O., Minkler, D. F., Sommer, R. D., Bhaumik, J., & Lindsey, J. S. (2014). Regioselective β-pyrrolic electrophilic substitution of hydrodipyrrin–dialkylboron complexes facilitates access to synthetic models for chlorophyll f. New Journal of Chemistry, 38(4), 1717. https://doi.org/10.1039/C3NJ01508D Huang, L., Krayer, M., Roubil, J. G. S., Huang, Y.-Y., Holten, D., Lindsey, J. S., & Hamblin, M. R. (2014). Stable synthetic mono-substituted cationic bacteriochlorins mediate selective broad-spectrum photoinactivation of drug-resistant pathogens at nanomolar concentrations. JOURNAL OF PHOTOCHEMISTRY AND PHOTOBIOLOGY B-BIOLOGY, 141, 119–127. https://doi.org/10.1016/j.jphotobiol.2014.09.016 Taniguchi, M., Henry, S., Cogdell, R. J., & Lindsey, J. S. (2014). Statistical considerations on the formation of circular photosynthetic light-harvesting complexes from Rhodopseudomonas palustris. PHOTOSYNTHESIS RESEARCH, 121(1), 49–60. https://doi.org/10.1007/s11120-014-9975-x Chen, C.-Y., Bocian, D. F., & Lindsey, J. S. (2014). Synthesis of 24 Bacteriochlorin Isotopologues, Each Containing a Symmetrical Pair of C-13 or N-15 Atoms in the Inner Core of the Macrocycle. JOURNAL OF ORGANIC CHEMISTRY, 79(3), 1001–1016. https://doi.org/10.1021/jo402488n Harris, M. A., Jiang, J., Niedzwiedzki, D. M., Jiao, J., Taniguchi, M., Kirmaier, C., … Parkes-Loach, P. S. (2014). Versatile design of biohybrid light-harvesting architectures to tune location, density, and spectral coverage of attached synthetic chromophores for enhanced energy capture. PHOTOSYNTHESIS RESEARCH, 121(1), 35–48. https://doi.org/10.1007/s11120-014-9993-8 Diers, J. R., Tang, Q., Hondros, C. J., Chen, C.-Y., Holten, D., Lindsey, J. S., & Bocian, D. F. (2014). Vibronic Characteristics and Spin-Density Distributions in Bacteriochlorins as Revealed by Spectroscopic Studies of 16 Isotopologues. Implications for Energy- and Electron-Transfer in Natural Photosynthesis and Artificial Solar-Energy Conversion. JOURNAL OF PHYSICAL CHEMISTRY B, 118(27), 7520–7532. https://doi.org/10.1021/jp504286w Aravindu, K., Mass, O., Vairaprakash, P., Springer, J. W., Yang, E., Niedzwiedzki, D. M., … Lindsey, J. S. (2013). Amphiphilic chlorins and bacteriochlorins in micellar environments. Molecular design, de novo synthesis, and photophysical properties. Chemical Science, 4(9), 3459. https://doi.org/10.1039/C3SC51335A Soares, A. R. M., Thanaiah, Y., Taniguchi, M., & Lindsey, J. S. (2013). Aqueous–membrane partitioning of β-substituted porphyrins encompassing diverse polarity. New Journal of Chemistry, 37(4), 1087. https://doi.org/10.1039/c3nj41042k Soares, A. R. M., Anderson, D. R., Chandrashaker, V., & Lindsey, J. S. (2013). Catalytic diversification upon metal scavenging in a prebiotic model for formation of tetrapyrrole macrocycles. NEW JOURNAL OF CHEMISTRY, 37(9), 2716–2732. https://doi.org/10.1039/c3nj00498h Wang, J., Yang, E., Diers, J. R., Niedzwiedzki, D. M., Kirmaier, C., Bocian, D. F., … Holten, D. (2013). Distinct Photophysical and Electronic Characteristics of Strongly Coupled Dyads Containing a Perylene Accessory Pigment and a Porphyrin, Chlorin, or Bacteriochlorin. JOURNAL OF PHYSICAL CHEMISTRY B, 117(31), 9288–9304. https://doi.org/10.1021/jp405004d Taniguchi, M., Du, H., & Lindsey, J. S. (2013). Enumeration of Virtual Libraries of Combinatorial Modular Macrocyclic (Bracelet, Necklace) Architectures and Their Linear Counterparts. JOURNAL OF CHEMICAL INFORMATION AND MODELING, 53(9), 2203–2216. https://doi.org/10.1021/ci400175f Soares, A. R. M., Taniguchi, M., Chandrashaker, V., & Lindsey, J. S. (2013). Expanded combinatorial formation of porphyrin macrocycles in aqueous solution containing vesicles. A prebiotic model. New Journal of Chemistry, 37(4), 1073. https://doi.org/10.1039/c3nj41041b Jiang, J., Vairaprakash, P., Reddy, K. R., Sahin, T., Pavan, M. P., Lubian, E., & Lindsey, J. S. (2014). Hydrophilic tetracarboxy bacteriochlorins for photonics applications. ORGANIC & BIOMOLECULAR CHEMISTRY, 12(1), 86–103. https://doi.org/10.1039/c3ob41791c Harris, M. A., Parkes-Loach, P. S., Springer, J. W., Jiang, J., Martin, E. C., Qian, P., … Loach, P. A. (2013). Integration of multiple chromophores with native photosynthetic antennas to enhance solar energy capture and delivery. Chemical Science, 4(10), 3924. https://doi.org/10.1039/C3SC51518D Reddy, K. R., Jiang, J., Krayer, M., Harris, M. A., Springer, J. W., Yang, E., … Lindsey, J. S. (2013). Palette of lipophilic bioconjugatable bacteriochlorins for construction of biohybrid light-harvesting architectures. Chemical Science, 4(5), 2036. https://doi.org/10.1039/C3SC22317E Yang, E., Ruzie, C., Krayer, M., Diers, J. R., Niedzwiedzki, D. M., Kirmaier, C., … Holten, D. (2013). Photophysical Properties and Electronic Structure of Bacteriochlorin-Chalcones with Extended Near-Infrared Absorption. PHOTOCHEMISTRY AND PHOTOBIOLOGY, 89(3), 586–604. https://doi.org/10.1111/php.12053 Aravindu, K., Kim, H.-J., Taniguchi, M., Dilbeck, P. L., Diers, J. R., Bocian, D. F., … Lindsey, J. S. (2013). Synthesis and photophysical properties of chlorins bearing 0–4 distinct meso-substituents. Photochemical & Photobiological Sciences, 12(12), 2089. https://doi.org/10.1039/C3PP50240F Reddy, K. R., Lubian, E., Pavan, M. P., Kim, H.-J., Yang, E., Holten, D., & Lindsey, J. S. (2013). Synthetic bacteriochlorins with integral spiro-piperidine motifs. New Journal of Chemistry, 37(4), 1157. https://doi.org/10.1039/C3NJ41161C Taniguchi, M., Soares, A. R. M., Chandrashaker, V., & Lindsey, J. S. (2012). A tandem combinatorial model for the prebiogenesis of diverse tetrapyrrole macrocycles. New Journal of Chemistry, 36(4), 1057. https://doi.org/10.1039/c2nj21050a Springer, J. W., Parkes-Loach, P. S., Reddy, K. R., Krayer, M., Jiao, J., Lee, G. M., … Loach, P. A. (2012). Biohybrid Photosynthetic Antenna Complexes for Enhanced Light-Harvesting. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 134(10), 4589–4599. https://doi.org/10.1021/ja207390y Chandrashaker, V., Taniguchi, M., Ptaszek, M., & Lindsey, J. S. (2012). Competing Knorr and Fischer-Fink pathways to pyrroles in neutral aqueous solution. TETRAHEDRON, 68(34), 6957–6967. https://doi.org/10.1016/j.tet.2012.05.080 Taniguchi, M., & Lindsey, J. S. (2012). Diversity, isomer composition, and design of combinatorial libraries of tetrapyrrole macrocycles. JOURNAL OF PORPHYRINS AND PHTHALOCYANINES, 16(1), 1–13. https://doi.org/10.1142/s1088424612004628 Hondros, C. J., Aravindu, K., Diers, J. R., Holten, D., Lindsey, J. S., & Bocian, D. F. (2012). Effects of Linker Torsional Constraints on the Rate of Ground-State Hole Transfer in Porphyrin Dyads. INORGANIC CHEMISTRY, 51(20), 11076–11086. https://doi.org/10.1021/ic301613k Springer, J. W., Faries, K. M., Diers, J. R., Muthiah, C., Mass, O., Kee, H. L., … Holten, D. (2012). Effects of Substituents on Synthetic Analogs of Chlorophylls. Part 3: The Distinctive Impact of Auxochromes at the 7-versus 3-Positions. PHOTOCHEMISTRY AND PHOTOBIOLOGY, 88(3), 651–674. https://doi.org/10.1111/j.1751-1097.2012.01083.x Yang, E., Diers, J. R., Huang, Y.-Y., Hamblin, M. R., Lindsey, J. S., Bocian, D. F., & Holten, D. (2013). Molecular Electronic Tuning of Photosensitizers to Enhance Photodynamic Therapy: Synthetic Dicyanobacteriochlorins as a Case Study. PHOTOCHEMISTRY AND PHOTOBIOLOGY, 89(3), 605–618. https://doi.org/10.1111/php.12021 Soares, A. R. M., Taniguchi, M., Chandrashaker, V., & Lindsey, J. (2012). Primordial oil slick and the formation of hydrophobic tetrapyrrole macrocycles. Astrobiology, 12(11), 1055–1068. https://doi.org/10.1089/ast.2012.0857 Soares, A. R. M., Taniguchi, M., Chandrashaker, V., & Lindsey, J. S. (2012). Self-organization of tetrapyrrole constituents to give a photoactive protocell. Chemical Science, 3(6), 1963. https://doi.org/10.1039/c2sc01120d Huang, Y.-Y., Balasubramanian, T., Yang, E., Luo, D., Diers, J. R., Bocian, D. F., … Hamblin, M. R. (2012). Stable Synthetic Bacteriochlorins for Photodynamic Therapy: Role of Dicyano Peripheral Groups, Central Metal Substitution (2H, Zn, Pd), and Cremophor EL Delivery. ChemMedChem, 7(12), 2155–2167. https://doi.org/10.1002/cmdc.201200351 Chen, C.-Y., Sun, E., Fan, D., Taniguchi, M., McDowell, B. E., Yang, E., … Lindsey, J. S. (2012). Synthesis and Physicochemical Properties of Metallobacteriochlorins. INORGANIC CHEMISTRY, 51(17), 9443–9464. https://doi.org/10.1021/ic301262k Sharma, S. K., Krayer, M., Sperandio, F. F., Huang, L., Huang, Y.-Y., Holten, D., … Hamblin, M. R. (2013). Synthesis and evaluation of cationic bacteriochlorin amphiphiles with effective in vitro photodynamic activity against cancer cells at low nanomolar concentration. JOURNAL OF PORPHYRINS AND PHTHALOCYANINES, 17(1-2), 73–85. https://doi.org/10.1142/s108842461250126x Mass, O., & Lindsey, J. S. (2011). A trans-AB-Bacteriochlorin Building Block. JOURNAL OF ORGANIC CHEMISTRY, 76(22), 9478–9487. https://doi.org/10.1021/jo201967k Krayer, M., Yang, E., Diers, J. R., Bocian, D. F., Holten, D., & Lindsey, J. S. (2011). De novo synthesis and photophysical characterization of annulated bacteriochlorins. Mimicking and extending the properties of bacteriochlorophylls. New Journal of Chemistry, 35(3), 587. https://doi.org/10.1039/c0nj00771d Mass, O., Pandithavidana, D. R., Ptaszek, M., Santiago, K., Springer, J. W., Jiao, J., … Lindsey, J. S. (2011). De novo synthesis and properties of analogues of the self-assembling chlorosomal bacteriochlorophylls. New Journal of Chemistry, 35(11), 2671. https://doi.org/10.1039/c1nj20611g Lindsey, J. S., Thamyongkit, P., Taniguchi, M., & Bocian, D. F. (2011). Encoding isotopic watermarks in molecular electronic materials as an anti-counterfeiting strategy. Application to porphyrins for information storage. JOURNAL OF PORPHYRINS AND PHTHALOCYANINES, 15(7-8), 505–516. https://doi.org/10.1142/s1088424611003458 Aravindu, K., Krayer, M., Kim, H.-J., & Lindsey, J. S. (2011). Facile synthesis of a B,D-tetradehydrocorrin and rearrangement to bacteriochlorins. New Journal of Chemistry, 35(7), 1376. https://doi.org/10.1039/c1nj20027e Lindsey, J. S., & Bocian, D. F. (2011). [Review of Molecules for Charge-Based Information Storage]. ACCOUNTS OF CHEMICAL RESEARCH, 44(8), 638–650. https://doi.org/10.1021/ar200107x Yang, E., Kirmaier, C., Krayer, M., Taniguchi, M., Kim, H.-J., Diers, J. R., … Holten, D. (2011). Photophysical Properties and Electronic Structure of Stable, Tunable Synthetic Bacteriochlorins: Extending the Features of Native Photosynthetic Pigments. JOURNAL OF PHYSICAL CHEMISTRY B, 115(37), 10801–10816. https://doi.org/10.1021/jp205258s Krayer, M., Yang, E., Kim, H.-J., Kee, H. L., Deans, R. M., Sluder, C. E., … Lindsey, J. S. (2011). Synthesis and Photophysical Characterization of Stable Indium Bacteriochlorins. INORGANIC CHEMISTRY, 50(10), 4607–4618. https://doi.org/10.1021/ic200325d Lindsey, J. S., Mass, O., & Chen, C.-Y. (2011). Tapping the near-infrared spectral region with bacteriochlorin arrays. NEW JOURNAL OF CHEMISTRY, 35(3), 511–516. https://doi.org/10.1039/c0nj00977f Taniguchi, M., Du, H., & Lindsey, J. S. (2011). Virtual Libraries of Tetrapyrrole Macrocycles. Combinatorics, Isomers, Product Distributions, and Data Mining. JOURNAL OF CHEMICAL INFORMATION AND MODELING, 51(9), 2233–2247. https://doi.org/10.1021/ci200240e Lindsey, J. S., Chandrashaker, V., Taniguchi, M., & Ptaszek, M. (2011). Abiotic formation of uroporphyrinogen and coproporphyrinogen from acyclic reactants. NEW JOURNAL OF CHEMISTRY, 35(1), 65–75. https://doi.org/10.1039/c0nj00716a Jiao, J., Taniguchi, M., Lindsey, J. S., & Bocian, D. F. (2010). Activation Energies for Oxidation of Porphyrin Monolayers Anchored to Au(111). LANGMUIR, 26(20), 15718–15721. https://doi.org/10.1021/la102802n Ptaszek, M., Lahaye, D., Krayer, M., Muthiah, C., & Lindsey, J. S. (2010). De Novo Synthesis of Long-Wavelength Absorbing Chlorin-13,15-dicarboximides. JOURNAL OF ORGANIC CHEMISTRY, 75(5), 1659–1673. https://doi.org/10.1021/jo902649d Kirmaier, C., Song, H.-eun, Yang, E., Schwartz, J. K., Hindin, E., Diers, J. R., … Holten, D. (2010). Excited-State Photodynamics of Perylene-Porphyrin Dyads 5 Tuning Light-Harvesting Characteristics via Perylene Substituents, Connection Motif, and Three-Dimensional Architecture. JOURNAL OF PHYSICAL CHEMISTRY B, 114(45), 14249–14264. https://doi.org/10.1021/jp910705q Krayer, M., Ptaszek, M., Kim, H.-J., Meneely, K. R., Fan, D., Secor, K., & Lindsey, J. S. (2010). Expanded Scope of Synthetic Bacteriochlorins via Improved Acid Catalysis Conditions and Diverse Dihydrodipyrrin-Acetals. JOURNAL OF ORGANIC CHEMISTRY, 75(4), 1016–1039. https://doi.org/10.1021/jo9025572 Huang, Y.-Y., Mroz, P., Zhiyentayev, T., Sharma, S. K., Balasubramanian, T., Ruzie, C., … Hamblin, M. R. (2010). In Vitro Photodynamic Therapy and Quantitative Structure-Activity Relationship Studies with Stable Synthetic Near-Infrared-Absorbing Bacteriochlorin Photosensitizers. JOURNAL OF MEDICINAL CHEMISTRY, 53(10), 4018–4027. https://doi.org/10.1021/jm901908s Diers, J. R., Taniguchi, M., Holten, D., Lindsey, J. S., & Bocian, D. F. (2010). Probing the Rate of Hole Transfer in Oxidized Porphyrin Dyads Using Thallium Hyperfine Clocks. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 132(34), 12121–12132. https://doi.org/10.1021/ja105082d Nieves-Bernier, E. J., Diers, J. R., Taniguchi, M., Holten, D., Bocian, D. F., & Lindsey, J. S. (2010). Probing the Rate of Hole Transfer in Oxidized Synthetic Chlorin Dyads via Site-Specific C-13-Labeling. JOURNAL OF ORGANIC CHEMISTRY, 75(10), 3193–3202. https://doi.org/10.1021/jo100527h Huang, L., Huang, Y.-Y., Mroz, P., Tegos, G. P., Zhiyentayev, T., Sharma, S. K., … Hamblin, M. R. (2010). Stable Synthetic Cationic Bacteriochlorins as Selective Antimicrobial Photosensitizers. ANTIMICROBIAL AGENTS AND CHEMOTHERAPY, 54(9), 3834–3841. https://doi.org/10.1128/aac.00125-10 Mroz, P., Huang, Y.-Y., Szokalska, A., Zhiyentayev, T., Janjua, S., Nifli, A.-P., … Hamblin, M. R. (2010). Stable synthetic bacteriochlorins overcome the resistance of melanoma to photodynamic therapy. FASEB JOURNAL, 24(9), 3160–3170. https://doi.org/10.1096/fj.09-152587 Mass, O., Taniguchi, M., Ptaszek, M., Springer, J. W., Faries, K. M., Diers, J. R., … Lindsey, J. S. (2011). Structural characteristics that make chlorophylls green: interplay of hydrocarbon skeleton and substituents. NEW JOURNAL OF CHEMISTRY, 35(1), 76–88. https://doi.org/10.1039/c0nj00652a Taniguchi, M., Mass, O., Boyle, P. D., Tang, Q., Diers, J. R., Bocian, D. F., … Lindsey, J. S. (2010). Structural studies of sparsely substituted synthetic chlorins and phorbines establish benchmarks for changes in the ligand core and framework of chlorophyll macrocycles. JOURNAL OF MOLECULAR STRUCTURE, 979(1-3), 27–45. https://doi.org/10.1016/j.molstruc.2010.05.035 Taniguchi, M., & Lindsey, J. S. (2010). Synthesis of oligo(p-phenylene)-linked dyads containing free base, zinc(II) or thallium(III) porphyrins for studies in artificial photosynthesis. TETRAHEDRON, 66(30), 5549–5565. https://doi.org/10.1016/j.tet.2010.05.059 Kee, H. L., Diers, J. R., Ptaszek, M., Muthiah, C., Fan, D., Lindsey, J. S., … Holten, D. (2009). Chlorin-Bacteriochlorin Energy-transfer Dyads as Prototypes for Near-infrared Molecular Imaging Probes: Controlling Charge-transfer and Fluorescence Properties in Polar Media. PHOTOCHEMISTRY AND PHOTOBIOLOGY, 85(4), 909–920. https://doi.org/10.1111/j.1751-1097.2008.00532.x Song, H.-eun, Taniguchi, M., Speckbacher, M., Yu, L., Bocian, D. F., Lindsey, J. S., & Holten, D. (2009). Excited-State Energy Flow in Phenylene-Linked Multiporphyrin Arrays. JOURNAL OF PHYSICAL CHEMISTRY B, 113(23), 8011–8019. https://doi.org/10.1021/jp902183g Ruzie, C., Krayer, M., & Lindsey, J. S. (2009). Fast and Robust Route to Hydroporphyrin-Chalcones with Extended Red or Near-Infrared Absorption. ORGANIC LETTERS, 11(8), 1761–1764. https://doi.org/10.1021/ol900277m Mroz, P., Bhaumik, J., Dogutan, D. K., Aly, Z., Kamal, Z., Khalid, L., … Hamblin, M. R. (2009). Imidazole metalloporphyrins as photosensitizers for photodynamic therapy: Role of molecular charge, central metal and hydroxyl radical production. CANCER LETTERS, 282(1), 63–76. https://doi.org/10.1016/j.canlet.2009.02.054 Song, H.-eun, Taniguchi, M., Diers, J. R., Kirmaier, C., Bocian, D. F., Lindsey, J. S., & Holten, D. (2009). Linker Dependence of Energy and Hole Transfer in Neutral and Oxidized Multiporphyrin Arrays. JOURNAL OF PHYSICAL CHEMISTRY B, 113(52), 16483–16493. https://doi.org/10.1021/jp9072558 Krayer, M., Balasubramanian, T., Ruzie, C., Ptaszek, M., Cramer, D. L., Taniguchi, M., & Lindsey, J. S. (2009). Refined syntheses of hydrodipyrrin precursors to chlorin and bacteriochlorin building blocks. JOURNAL OF PORPHYRINS AND PHTHALOCYANINES, 13(10), 1098–1110. https://doi.org/10.1142/S1088424609001406 Muthiah, C., Lahaye, D., Taniguchi, M., Ptaszek, M., & Lindsey, J. S. (2009). Regioselective Bromination Tactics in the de Novo Synthesis of Chlorophyll b Analogues. JOURNAL OF ORGANIC CHEMISTRY, 74(9), 3237–3247. https://doi.org/10.1021/jo9002954 Lindsey, J. S., Ptaszek, M., & Taniguchi, M. (2009). Simple Formation of an Abiotic Porphyrinogen in Aqueous Solution. ORIGINS OF LIFE AND EVOLUTION OF BIOSPHERES, 39(6), 495–515. https://doi.org/10.1007/s11084-009-9168-3 Mardis, K. L., Sutton, H. M., Zuo, X., Lindsey, J. S., & Tiede, D. M. (2009). Solution-State Conformational Ensemble of a Hexameric Porphyrin Array Characterized Using Molecular Dynamics and X-ray Scattering. JOURNAL OF PHYSICAL CHEMISTRY A, 113(11), 2516–2523. https://doi.org/10.1021/jp808318x Mass, O., Ptaszek, M., Taniguchi, M., Diers, J. R., Kee, H. L., Bocian, D. F., … Lindsey, J. S. (2009). Synthesis and Photochemical Properties of 12-Substituted versus 13-Substituted Chlorins. JOURNAL OF ORGANIC CHEMISTRY, 74(15), 5276–5289. https://doi.org/10.1021/jo900706x Laha, J. K., Muthiah, C., Taniguchi, M., McDowell, B. E., Ptaszek, M., & Lindsey, J. S. (2009). Synthetic Chlorins Bearing Auxochromes at the 3- and 13-Positions. The Journal of Organic Chemistry, 74(14), 5122–5122. https://doi.org/10.1021/jo9010602 Lindsey, J. S. (2010). [Review of Synthetic Routes to meso-Patterned Porphyrins]. ACCOUNTS OF CHEMICAL RESEARCH, 43(2), 300–311. https://doi.org/10.1021/ar900212t Schmidt, I., Jiao, J., Bocian, D. F., & Lindsey, J. S. (2008, September). A Bipodal-Tethered Porphyrin for Attachment to Silicon Surfaces in Studies of Molecular Information Storage. JOURNAL OF NANOSCIENCE AND NANOTECHNOLOGY, Vol. 8, pp. 4813–4817. https://doi.org/10.1166/jnn.2008.IC85 Taniguchi, M., Cramer, D. L., Bhise, A. D., Kee, H. L., Bocian, D. F., Holten, D., & Lindsey, J. S. (2008). Accessing the near-infrared spectral region with stable, synthetic, wavelength-tunable bacteriochlorins. NEW JOURNAL OF CHEMISTRY, 32(6), 947–958. https://doi.org/10.1039/b717803d Jiao, J., Schmidt, I., Taniguchi, M., Lindsey, J. S., & Bocian, D. F. (2008). Comparison of Electron-Transfer Rates for Metal- versus Ring-Centered Redox Processes of Porphyrins in Monolayers on Au(111). LANGMUIR, 24(20), 12047–12053. https://doi.org/10.1021/la8019843 Anariba, F., Tiznado, H., Diers, J. R., Schmidt, I., Muresan, A. Z., Lindsey, J. S., … Bocian, D. F. (2008). Comprehensive characterization of hybrid junctions comprised of a porphyrin monolayer sandwiched between a coinage metal overlayer and a Si(100) substrate. JOURNAL OF PHYSICAL CHEMISTRY C, 112(25), 9474–9485. https://doi.org/10.1021/jp802428y Muresan, A. Z., & Lindsey, J. S. (2008). Design and synthesis of water-soluble bioconjugatable trans-AB-porphyrins. TETRAHEDRON, 64(50), 11440–11448. https://doi.org/10.1016/j.tet.2008.08.096 Borbas, K. E., Chandrashaker, V., Muthiah, C., Kee, H. L., Holten, D., & Lindsey, J. S. (2008). Design, synthesis, and photophysical characterization of water-soluble chlorins. JOURNAL OF ORGANIC CHEMISTRY, 73(8), 3145–3158. https://doi.org/10.1021/jo7026728 Song, H.-eun, Kirmaier, C., Taniguchi, M., Diers, J. R., Bocian, D. F., Lindsey, J. S., & Holten, D. (2008). Determination of Ground-State Hole-Transfer Rates Between Equivalent Sites in Oxidized Multiporphyrin Arrays Using Time-Resolved Optical Spectroscopy. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 130(46), 15636–15648. https://doi.org/10.1021/ja805673m Jiao, J., Nordfund, E., Lindsey, J. S., & Bocian, D. F. (2008). Effects of counterion mobility, surface morphology, and charge screening on the electron-transfer rates of porphyrin monolayers. JOURNAL OF PHYSICAL CHEMISTRY C, 112(15), 6173–6180. https://doi.org/10.1021/jp800123u Song, H.-eun, Kirmaier, C., Diers, J. R., Lindsey, J. S., Bocian, D. F., & Holten, D. (2009). Energy- and Hole-Transfer Dynamics in Oxidized Porphyrin Dyads. JOURNAL OF PHYSICAL CHEMISTRY B, 113(1), 54–63. https://doi.org/10.1021/jp8060637 Kee, H. L., Nothdurft, R., Muthiah, C., Diers, J. R., Fan, D., Ptaszek, M., … Holten, D. (2008). Examination of chlorin-bacteriochlorin energy-transfer dyads as prototypes for near-infrared molecular imaging probes. PHOTOCHEMISTRY AND PHOTOBIOLOGY, 84(5), 1061–1072. https://doi.org/10.1111/j.1751-1097.2008.00409.x Dogutan, D. K., & Lindsey, J. S. (2008). Investigation of the scope of a new route to ABCD-bilanes and ABCD-porphyrins. JOURNAL OF ORGANIC CHEMISTRY, 73(17), 6728–6742. https://doi.org/10.1021/jo8010396 Anariba, F., Schmidt, L., Muresan, A. Z., Lindsey, J. S., & Bocian, D. F. (2008). Metal-molecule interactions upon deposition of copper overlayers on reactively functionalized porphyrin monolayers on Si(100). LANGMUIR, 24(13), 6698–6704. https://doi.org/10.1021/la800472c Kee, H. L., Bhaumik, J., Diers, J. R., Mroz, P., Hamblin, M. R., Bocian, D. F., … Holten, D. (2008). Photophysical characterization of imidazolium-substituted Pd(II), In(III), and Zn(II) porphyrins as photosensitizers for photodynamic therapy. JOURNAL OF PHOTOCHEMISTRY AND PHOTOBIOLOGY A-CHEMISTRY, 200(2-3), 346–355. https://doi.org/10.1016/j.jphotochem.2008.08.006 Song, H.-eun, Taniguchi, M., Kirmaier, C., Bocian, D. F., Lindsey, J. S., & Holten, D. (2009). Probing Ground-state Hole Transfer Between Equivalent, Electrochemically Inaccessible States in Multiporphyrin Arrays Using Time-resolved Optical Spectroscopy. PHOTOCHEMISTRY AND PHOTOBIOLOGY, 85(3), 693–704. https://doi.org/10.1111/j.1751-1097.2008.00471.x Dogutan, D. K., Ptaszek, M., & Lindsey, J. S. (2008). Rational or statistical routes from 1-acyldipyrromethanes to meso-substituted porphyrins. Distinct patterns, multiple pyridyl substituents, and amphipathic architectures. JOURNAL OF ORGANIC CHEMISTRY, 73(16), 6187–6201. https://doi.org/10.1021/jo800588n Muresan, A. Z., Thamyongkit, P., Diers, J. R., Holten, D., Lindsey, J. S., & Bocian, D. F. (2008). Regiospecifically alpha-C-13-labeled porphyrins for studies of ground-state hole transfer in multiporphyrin arrays. JOURNAL OF ORGANIC CHEMISTRY, 73(18), 6947–6959. https://doi.org/10.1021/jo8012836 Borbas, K. E., Ruzie, C., & Lindsey, J. S. (2008). Swallowtail bacteriochlorins. Lipophilic absorbers for the near-infrared. ORGANIC LETTERS, 10(10), 1931–1934. https://doi.org/10.1021/ol800436u Muthiah, C., Kee, H. L., Diers, J. R., Fan, D., Ptaszek, M., Bocian, D. F., … Lindsey, J. S. (2008). Synthesis and excited-state photodynamics of a chlorin-bacteriochlorin dyad-through-space versus through-bond energy transfer in tetrapyrrole arrays. PHOTOCHEMISTRY AND PHOTOBIOLOGY, 84(3), 786–801. https://doi.org/10.1111/j.1751-1097.2007.00258.x Ruzie, C., Krayer, M., Balasubramanian, T., & Lindsey, J. S. (2008). Tailoring a bacteriochlorin building block with cationic, amphipathic, or lipophilic substituents. JOURNAL OF ORGANIC CHEMISTRY, 73(15), 5806–5820. https://doi.org/10.1021/jo800736c Rogers, S. A., Krayer, M., Lindsey, J. S., & Melander, C. (2009). Tandem dispersion and killing of bacteria from a biofilm. ORGANIC & BIOMOLECULAR CHEMISTRY, 7(3), 603–606. https://doi.org/10.1039/b817923a Borbas, K. E., Kee, H. L., Holten, D., & Lindsey, J. S. (2008). A compact water-soluble porphyrin bearing an iodoacetamido bioconjugatable site. ORGANIC & BIOMOLECULAR CHEMISTRY, 6(1), 187–194. https://doi.org/10.1039/b715072e Jiao, J., Thamyongkit, P., Schmidt, I., Lindsey, J. S., & Bocian, D. F. (2007). Characterization of porphyrin surface orientation in monolayers on au(111) and si(100) using spectroscopically labeled molecules. JOURNAL OF PHYSICAL CHEMISTRY C, 111(34), 12693–12704. https://doi.org/10.1021/jp073824c Lahaye, D., Muthukumaran, K., Hung, C.-H., Gryko, D., Reboucas, J. S., Spasojevic, I., … Lindsey, J. S. (2007). [Review of Design and synthesis of manganese porphyrins with tailored lipophilicity: Investigation of redox properties and superoxide dismutase activity]. BIOORGANIC & MEDICINAL CHEMISTRY, 15(22), 7066–7086. https://doi.org/10.1016/j.bmc.2007.07.015 Dogutan, D. K., Ptaszek, M., & Lindsey, J. S. (2007). Direct synthesis of magnesium porphine via 1-formyldipyrromethane. JOURNAL OF ORGANIC CHEMISTRY, 72(13), 5008–5011. https://doi.org/10.1021/jo070532z Kee, H. L., Kirmaier, C., Tang, Q., Diers, J. R., Muthiah, C., Taniguchi, M., … Holten, D. (2007). Effects of substituents on synthetic analogs of chlorophylls. Part 1: Synthesis, vibrational properties and excited-state decay characteristics. PHOTOCHEMISTRY AND PHOTOBIOLOGY, 83(5), 1110–1124. https://doi.org/10.1111/j.1751-1097.2007.00150.x Kee, H. L., Kirmaier, C., Tang, G., Diers, J. R., Muthiah, C., Taniguchi, M., … Hoten, D. (2007). Effects of substituents on synthetic analogs of chlorophylls. Part 2: Redox properties, optical spectra and electronic structure. PHOTOCHEMISTRY AND PHOTOBIOLOGY, 83(5), 1125–1143. https://doi.org/10.1111/j.1751-1097.2007.00151.x Stromberg, J. R., Marton, A., Kee, H. L., Kirmaier, C., Diers, J. R., Muthiah, C., … Holten, D. (2007). Examination of tethered porphyrin, chlorin, and bacteriochlorin molecules in mesoporous metal-oxide solar cells. JOURNAL OF PHYSICAL CHEMISTRY C, 111(42), 15464–15478. https://doi.org/10.1021/jp0749928 Thamyongkit, P., Muresan, A. Z., Diers, J. R., Holten, D., Bocian, D. F., & Lindsey, J. S. (2007). Meso-C-13-labeled porphyrins for studies of ground-state hole transfer in multiporphyrin arrays. JOURNAL OF ORGANIC CHEMISTRY, 72(14), 5207–5217. https://doi.org/10.1021/jo070593x Dogutan, D. K., Zaidi, S. H. H., Thamyongkit, P., & Lindsey, J. S. (2007). New route to ABCD-porphyrins via bilanes. JOURNAL OF ORGANIC CHEMISTRY, 72(20), 7701–7714. https://doi.org/10.1021/jo701294d Muthiah, C., Bhaumik, J., & Lindsey, J. S. (2007). Rational routes to formyl-substituted chlorins. JOURNAL OF ORGANIC CHEMISTRY, 72(15), 5839–5842. https://doi.org/10.1021/jo0707885 Fan, D., Taniguchi, M., & Lindsey, J. S. (2007). Regioselective 15-bromination and functionalization of a stable synthetic bacteriochlorin. JOURNAL OF ORGANIC CHEMISTRY, 72(14), 5350–5357. https://doi.org/10.1021/jo070785s Yao, Z., Borbas, K. E., & Lindsey, J. S. (2008). Soluble precipitable porphyrins for use in targeted molecular brachytherapy. NEW JOURNAL OF CHEMISTRY, 32(3), 436–451. https://doi.org/10.1039/b714127k Ptaszek, M., McDowell, B. E., Taniguchi, M., Kim, H.-J., & Lindsey, J. S. (2007). [Review of Sparsely substituted chlorins as core constructs in chlorophyll analogue chemistry. Part 1: Synthesis]. TETRAHEDRON, 63(18), 3826–3839. https://doi.org/10.1016/j.tet.2007.02.038 Taniguchi, M., Ptaszek, M., McDowell, B. E., & Lindsey, J. S. (2007). Sparsely substituted chlorins as core constructs in chlorophyll analogue chemistry. Part 2: Derivatization. TETRAHEDRON, 63(18), 3840–3849. https://doi.org/10.1016/j.tet.2007.02.076 Taniguchi, M., Ptaszek, M., McDowell, B. E., Boyle, P. D., & Lindsey, J. S. (2007). Sparsely substituted chlorins as core constructs in chlorophyll analogue chemistry. Part 3: Spectral and structural properties. TETRAHEDRON, 63(18), 3850–3863. https://doi.org/10.1016/j.tet.2007.02.040 Muthiah, C., Taniguchi, M., Kim, H.-J., Schmidt, I., Kee, H. L., Holten, D., … Lindsey, J. S. (2007). Synthesis and photophysical characterization of porphyrin, chlorin and bacteriochlorin molecules bearing tethers for surface attachment. PHOTOCHEMISTRY AND PHOTOBIOLOGY, 83(6), 1513–1528. https://doi.org/10.1111/j.1751-1097.2007.00195.x Ptaszek, M., Yao, Z., Savithri, D., Boyle, P. D., & Lindsey, J. S. (2007). Synthesis and structural properties of porphyrin analogues of bacteriochlorophyll c. TETRAHEDRON, 63(51), 12629–12638. https://doi.org/10.1016/j.tet.2007.10.023 Yao, Z., Bhaumik, J., Dhanalekshmi, S., Ptaszek, M., Rodriguez, P. A., & Lindsey, J. S. (2007). Synthesis of porphyrins bearing 1-4 hydroxymethyl groups and other one-carbon oxygenic substituents in distinct patterns. TETRAHEDRON, 63(43), 10657–10670. https://doi.org/10.1016/j.tet.2007.07.108 Kulikov, O. V., Schmidt, I., Muresan, A. Z., Lee, M. A.-P., Bocian, D. F., & Lindsey, J. S. (2007). Synthesis of porphyrins for metal deposition studies in molecular information storage applications. JOURNAL OF PORPHYRINS AND PHTHALOCYANINES, 11(10), 699–712. https://doi.org/10.1142/S1088424607000801 Chen, L. X., Zhang, X., Wasinger, E. C., Attenkofer, K., Jennings, G., Muresan, A. Z., & Lindsey, J. S. (2007). Tracking electrons and atoms in a photoexcited metalloporphyrin by X-ray transient absorption spectroscopy. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 129(31), 9616-+. https://doi.org/10.1021/ja072979v Muthiah, C., Ptaszek, M., Nguyen, T. M., Flack, K. M., & Lindsey, J. S. (2007). Two complementary routes to 7-substituted chlorins. Partial mimics of chlorophyll b. JOURNAL OF ORGANIC CHEMISTRY, 72(20), 7736–7749. https://doi.org/10.1021/jo701500d Zhang, X., Wasinger, E. C., Muresan, A. Z., Attenkofer, K., Jennings, G., Lindsey, J. S., & Chen, L. X. (2007). Ultrafast stimulated emission and structural dynamics in nickel porphyrins. JOURNAL OF PHYSICAL CHEMISTRY A, 111(46), 11736–11742. https://doi.org/10.1021/jp0751763 Laha, J. K., Muthiah, C., Taniguchi, M., & Lindsey, J. S. (2006). A new route for installing the isocyclic ring on chlorins yielding 13(1)-oxophorbines. JOURNAL OF ORGANIC CHEMISTRY, 71(18), 7049–7052. https://doi.org/10.1021/jo0608265 Thamyongkit, P., Bhise, A. D., Taniguchi, M., & Lindsey, J. S. (2006). Alkylthio unit as an alpha-pyrrole protecting group for use in dipyrromethane synthesis. JOURNAL OF ORGANIC CHEMISTRY, 71(3), 903–910. https://doi.org/10.1021/jo051806q Borbas, K. E., Mroz, P., Hamblin, M. R., & Lindsey, J. S. (2006). Bioconjugatable porphyrins bearing a compact swallowtail motif for water solubility. BIOCONJUGATE CHEMISTRY, 17(3), 638–653. https://doi.org/10.1021/bc050337w Lysenko, A. B., Thamyongkit, P., Schmidt, I., Diers, J. R., Bocian, D. F., & Lindsey, J. S. (2006). Diverse porphyrin dimers as candidates for high-density charge-storage molecules. JOURNAL OF PORPHYRINS AND PHTHALOCYANINES, 10(1), 22–32. https://doi.org/10.1142/S1088424606000041 Song, H.-eun, Kirmaier, C., Schwartz, J. K., Hindin, E., Yu, L., Bocian, D. F., … Holten, D. (2006). Effects of multiple pathways on excited-state energy flow in self-assembled wheel-and-spoke light-harvesting architectures. JOURNAL OF PHYSICAL CHEMISTRY B, 110(39), 19131–19139. https://doi.org/10.1021/jp064001a Schmidt, I., Jiao, J. Y., Thamyongkit, P., Sharada, D. S., Bocian, D. F., & Lindsey, J. S. (2006). Investigation of stepwise covalent synthesis on a surface yielding porphyrin-based multicomponent architectures. JOURNAL OF ORGANIC CHEMISTRY, 71(8), 3033–3050. https://doi.org/10.1021/jo052650x Bhaumik, J., Yao, Z., Borbas, K. E., Taniguchi, M., & Lindsey, J. S. (2006). Masked imidazolyl-dipyrromethanes in the synthesis of imidazole-substituted porphyrins. JOURNAL OF ORGANIC CHEMISTRY, 71(23), 8807–8817. https://doi.org/10.1021/jo061461r Song, H.-eun, Kirmaier, C., Schwartz, J. K., Hindin, E., Yu, L., Bocian, D. F., … Holten, D. (2006). Mechanisms, pathways, and dynamics of excited-state energy flow in self-assembled wheel-and-spoke light-harvesting architectures. JOURNAL OF PHYSICAL CHEMISTRY B, 110(39), 19121–19130. https://doi.org/10.1021/jp064000i Zaidi, S. H. H., Loewe, R. S., Clark, B. A., Jacob, M. J., & Lindsey, J. S. (2006). Nearly chromatography-free synthesis of the A(3)B-porphyrin 5-(4-hydroxymethylphenyl)-10,15,20-tri-p-tolylporphinatozinc(II). ORGANIC PROCESS RESEARCH & DEVELOPMENT, 10(2), 304–314. https://doi.org/10.1021/op0502553 Thamyongkit, P., Yu, L. H., Padmaja, K., Jiao, J. Y., Bocian, D. F., & Lindsey, J. S. (2006). Porphyrin dyads bearing carbon tethers for studies of high-density molecular charge storage on silicon surfaces. JOURNAL OF ORGANIC CHEMISTRY, 71(3), 1156–1171. https://doi.org/10.1021/jo0522761 Jiao, J., Anariba, F., Tiznado, H., Schmidt, I., Lindsey, J. S., Zaera, F., & Bocian, D. F. (2006). Stepwise formation and characterization of covalently linked multiporphyrin-imide architectures on Si(100). JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 128(21), 6965–6974. https://doi.org/10.1021/ja060906q Ptaszek, M., McDowell, B. E., & Lindsey, J. S. (2006). Synthesis of 1-formyldipyrromethanes. JOURNAL OF ORGANIC CHEMISTRY, 71(11), 4328–4331. https://doi.org/10.1021/jo060119b Kim, H.-J., Dogutan, D. K., Ptaszek, M., & Lindsey, J. S. (2007). Synthesis of hydrodipyrrins tailored for reactivity at the 1- and 9-positions. TETRAHEDRON, 63(1), 37–55. https://doi.org/10.1016/j.tet.2006.10.027 Laha, J. K., Muthiah, C., Taniguchi, M., McDowell, B. E., Ptaszek, M., & Lindsey, J. S. (2006). Synthetic chlorins bearing auxochromes at the 3- and 13-positions. JOURNAL OF ORGANIC CHEMISTRY, 71(11), 4092–4102. https://doi.org/10.1021/jo060208o Hasselman, G. M., Watson, D. F., Stromberg, J. R., Bocian, D. F., Holten, D., Lindsey, J. S., & Meyer, G. J. (2006). Theoretical solar-to-electrical energy-conversion efficiencies of perylene-porphyrin light-harvesting arrays. JOURNAL OF PHYSICAL CHEMISTRY B, 110(50), 25430–25440. https://doi.org/10.1021/jp064547x Padmaja, K., Youngblood, W. J., Wei, L., Bocian, D. F., & Lindsey, J. S. (2006). Triple-decker sandwich compounds bearing compact triallyl tripods for molecular information storage applications. INORGANIC CHEMISTRY, 45(14), 5479–5492. https://doi.org/10.1021/ic060387s Fan, D. Z., Taniguchi, M., Yao, Z., Dhanalekshmi, S., & Lindsey, J. S. (2005). 1,9-bis(N,N-dimethylaminomethyl)dipyrromethanes in the synthesis of porphyrins bearing one or two meso substituents. TETRAHEDRON, 61(43), 10291–10302. https://doi.org/10.1016/j.tet.2005.08.028 Padmaja, K., Wei, L. Y., Lindsey, J. S., & Bocian, D. F. (2005). A compact all-carbon tripodal tether affords high coverage of porphyrins on silicon surfaces. JOURNAL OF ORGANIC CHEMISTRY, 70(20), 7972–7978. https://doi.org/10.1021/jo0510078 Wei, L. Y., Tiznado, H., Liu, G. M., Padmaja, K., Lindsey, J. S., Zaera, F., & Bocian, D. F. (2005). Adsorption characteristics of tripodal thiol-functionalized porphyrins on gold. JOURNAL OF PHYSICAL CHEMISTRY B, 109(50), 23963–23971. https://doi.org/10.1021/jp0537005 Kim, H. J., & Lindsey, J. S. (2005). De novo synthesis of stable tetrahydroporphyrinic macrocycles: Bacteriochlorins and a tetradehydrocorrin. JOURNAL OF ORGANIC CHEMISTRY, 70(14), 5475–5486. https://doi.org/10.1021/jo050467y Sharada, D. S., Muresan, A. Z., Muthukumaran, K., & Lindsey, J. S. (2005). Direct synthesis of palladium porphyrins from acyldipyrromethanes. JOURNAL OF ORGANIC CHEMISTRY, 70(9), 3500–3510. https://doi.org/10.1021/jo050120v Taniguchi, M., Balakumar, A., Fan, D. Z., McDowell, B. E., & Lindsey, J. S. (2005). Imine-substituted dipyrromethanes in the synthesis of porphyrins bearing one or two meso substituents. JOURNAL OF PORPHYRINS AND PHTHALOCYANINES, 9(8), 554–574. https://doi.org/10.1142/S1088424605000678 Zaidi, S. H. H., Fico, F. M., & Lindsey, J. S. (2006). Investigation of streamlined syntheses of porphyrins bearing distinct meso substituents. ORGANIC PROCESS RESEARCH & DEVELOPMENT, 10(1), 118–134. https://doi.org/10.1021/op050193g Lysenko, A. B., Malinovskii, V. L., Padmaja, K., Wei, L. Y., Diers, JR, Bocian, D. F., & Lindsey, J. S. (2005). Multistate molecular information storage using S-acetylthio-derivatized dyads of triple-decker sandwich coordination compounds. JOURNAL OF PORPHYRINS AND PHTHALOCYANINES, 9(7), 491–508. https://doi.org/10.1142/S1088424605000617 Dixon, J. M., Taniguchi, M., & Lindsey, J. S. (2005). PhotochemCAD 2: A Refined Program with Accompanying Spectral Databases for Photochemical Calculations. PHOTOCHEMISTRY AND PHOTOBIOLOGY, 81(1), 212–213. https://doi.org/10.1562/2004-11-06-TSN-361.1 Ptaszek, M., Bhaumik, J., Kim, H. J., Taniguchi, M., & Lindsey, J. S. 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Structural and electron-transfer characteristics of carbon-tethered porphyrin monolayers on Si(100). JOURNAL OF PHYSICAL CHEMISTRY B, 109(13), 6323–6330. https://doi.org/10.1021/jp044558v Kee, H. L., Kirmaier, C., Yu, L. H., Thamyongkit, P., Youngblood, W. J., Calder, M. E., … Holten, D. (2005). Structural control of the photodynamics of boron-dipyrrin complexes. JOURNAL OF PHYSICAL CHEMISTRY B, 109(43), 20433–20443. https://doi.org/10.1021/jp0525078 Liu, Z., Schmidt, I., Thamyongkit, P., Loewe, R. S., Syomin, D., Diers, J. R., … Bocian, D. F. (2005). Synthesis and Film-Forming Properties of Ethynylporphyrins. Chemistry of Materials, 17(14), 3728–3742. https://doi.org/10.1021/cm047858y Muthukumaran, K., Zaidi, S. H. H., Yu, L., Thamyongkit, P., Calder, M. E., Sharada, D. S., & Lindsey, J. S. (2005). Synthesis of dipyrrin-containing architectures. JOURNAL OF PORPHYRINS AND PHTHALOCYANINES, Vol. 9, pp. 745–759. https://doi.org/10.1142/S108842460500085X Zaidi, S. H. H., Muthukumaran, K., Tamaru, S., & Lindsey, J. S. (2004). 9-Acylation of 1-acyldipyrromethanes containing a dialkylboron mask for the alpha-acylpyrrole motif. JOURNAL OF ORGANIC CHEMISTRY, 69(24), 8356–8365. https://doi.org/10.1021/jo048587d Balakumar, A., Muthukumaran, K., & Lindsey, J. S. (2004). A new route to meso-formyl porphyrins. JOURNAL OF ORGANIC CHEMISTRY, 69(15), 5112–5115. https://doi.org/10.1021/jo049819b Tamaru, S., Yu, L. H., Youngblood, W. J., Muthukumaran, K., Taniguchi, M., & Lindsey, J. S. (2004). A tin-complexation strategy for use with diverse acylation methods in the preparation of 1,9-diacyldipyrromethanes. JOURNAL OF ORGANIC CHEMISTRY, 69(3), 765–777. https://doi.org/10.1021/jo035622s Dixon, J. M., & Lindsey, J. S. (2004). An experiment planner for parallel multidirectional searches using an automated chemistry workstation. Journal of the Association for Laboratory Automation, 9(6), 355–363. https://doi.org/10.1016/j.jala.2004.08.001 Yasseri, A. 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JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 126(43), 14054–14062. https://doi.org/10.1021/ja048209q Sazanovich, IV, Kirmaier, C., Hindin, E., Yu, L. H., Bocian, D. F., Lindsey, J. S., & Holten, D. (2004). Structural control of the excited-state dynamics of bis(dipyrrinato)zinc complexes: Self-assembling chromophores for light-harvesting architectures. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 126(9), 2664–2665. https://doi.org/10.1021/ja038763k Thamyongkit, P., Speckbacher, M., Diers, JR, Kee, H. L., Kirmaier, C., Holten, D., … Lindsey, J. S. (2004). Swallowtail porphyrins: Synthesis, characterization and incorporation into porphyrin dyads. JOURNAL OF ORGANIC CHEMISTRY, 69(11), 3700–3710. https://doi.org/10.1021/jo049860e Tomizaki, K., Lysenko, A. B., Taniguchi, M., & Lindsey, J. S. (2004). Synthesis of phenylethyne-linked porphyrin dyads. TETRAHEDRON, 60(9), 2011–2023. https://doi.org/10.1016/j.tet.2004.01.003 Liu, Z. M., Yasseri, A. A., Loewe, R. S., Lysenko, A. B., Malinovskii, V. L., Zhao, Q., … Bocian, D. F. (2004). Synthesis of porphyrins bearing hydrocarbon tethers and facile covalent attachment to Si(100). JOURNAL OF ORGANIC CHEMISTRY, 69(17), 5568–5577. https://doi.org/10.1021/jo049439q Thamyongkit, P., & Lindsey, J. S. (2004). Synthesis of swallowtail-substituted multiporphyrin rods. JOURNAL OF ORGANIC CHEMISTRY, 69(17), 5796–5799. https://doi.org/10.1021/jo049348t Laha, J. K., Dhanalekshmi, S., Taniguchi, M., Ambroise, A., & Lindsey, J. S. (2003). A scalable synthesis of meso-substituted dipyrromethanes. ORGANIC PROCESS RESEARCH & DEVELOPMENT, 7(6), 799–812. https://doi.org/10.1021/op034083q Taniguchi, M., Ra, D., Kirmaier, C., Hindin, E., Schwartz, J. K., Diers, JR, … Holten, D. (2003). Comparison of excited-state energy transfer in arrays of hydroporphyrins (chlorins, oxochlorins) versus porphyrins: Rates, mechanisms, and design criteria. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 125(44), 13461–13470. https://doi.org/10.1021/ja035987u Balakumar, A., Lysenko, A. B., Carcel, C., Malinovskii, V. L., Gryko, D. T., Schweikart, K. H., … Lindsey, J. S. (2004). Diverse redox-active molecules bearing O-, S-, or Se-terminated tethers for attachment to silicon in studies of molecular information storage. JOURNAL OF ORGANIC CHEMISTRY, 69(5), 1435–1443. https://doi.org/10.1021/jo034944t Wei, L. Y., Padmaja, K., Youngblood, W. J., Lysenko, A. B., Lindsey, J. S., & Bocian, D. F. (2004). Diverse redox-active molecules bearing identical thiol-terminated tripodal tethers for studies of molecular information storage. JOURNAL OF ORGANIC CHEMISTRY, 69(5), 1461–1469. https://doi.org/10.1021/jo0349476 Li, Q. L., Surthi, S., Mathur, G., Gowda, S., Misra, V., Sorenson, T. A., … Bocian, D. F. (2003). Electrical characterization of redox-active molecular monolayers on SiO2 for memory applications. APPLIED PHYSICS LETTERS, 83(1), 198–200. https://doi.org/10.1063/1.1584088 Yu, L. H., Muthukumaran, K., Sazanovich, IV, Kirmaier, C., Hindin, E., Diers, JR, … Lindsey, J. S. (2003). Excited-state energy-transfer dynamics in self-assembled triads composed of two porphyrins and an intervening bis(dipyrrinato)metal complex. INORGANIC CHEMISTRY, 42(21), 6629–6647. https://doi.org/10.1021/ic034559m Sazanovich, IV, Balakumar, A., Muthukumaran, K., Hindin, E., Kirmaier, C., Diers, JR, … Holten, D. (2003). Excited-state energy-transfer dynamics of self-assembled imine-linked porphyrin dyads. INORGANIC CHEMISTRY, 42(21), 6616–6628. https://doi.org/10.1021/ic034558u Speckbacher, M., Yu, L. H., & Lindsey, J. S. (2003). Formation of porphyrins in the presence of acid-labile metalloporphyrins: A new route to mixed-metal multiporphyrin arrays. INORGANIC CHEMISTRY, 42(14), 4322–4337. https://doi.org/10.1021/ic026206d Liu, Z. M., Yasseri, A. A., Lindsey, J. S., & Bocian, D. F. (2003). Molecular memories that survive silicon device processing and real-world operation. SCIENCE, 302(5650), 1543–1545. https://doi.org/10.1126/science.1090677 Muthukumaran, K., Loewe, R. S., Ambroise, A., Tamaru, S. I., Li, Q. L., Mathur, G., … Lindsey, J. S. (2004). Porphyrins bearing arylphosphonic acid tethers for attachment to oxide surfaces. JOURNAL OF ORGANIC CHEMISTRY, 69(5), 1444–1452. https://doi.org/10.1021/jo034945l Loewe, R. S., Ambroise, A., Muthukumaran, K., Padmaja, K., Lysenko, A. B., Mathur, G., … Lindsey, J. S. (2004). Porphyrins bearing mono or tripodal benzylphosphonic acid tethers for attachment to oxide surfaces. JOURNAL OF ORGANIC CHEMISTRY, 69(5), 1453–1460. https://doi.org/10.1021/jo034946d Tomizaki, K. Y., Thamyongkit, P., Loewe, R. S., & Lindsey, J. S. (2003). Practical synthesis of perylene-monoimide building blocks that possess features appropriate for use in porphyrin-based light-harvesting arrays. TETRAHEDRON, 59(8), 1191–1207. https://doi.org/10.1016/S0040-4020(03)00020-6 Schweikart, K. H., Malinovskii, V. L., Yasseri, A. A., Li, J. Z., Lysenko, A. B., Bocian, D. F., & Lindsey, J. S. (2003). Synthesis and characterization of bis(S-acetylthio)-derivatized europium triple-decker monomers and oligomers. INORGANIC CHEMISTRY, 42(23), 7431–7446. https://doi.org/10.1021/ic034730u Muthukumaran, K., Loewe, R. S., Kirmaier, C., Hindin, E., Schwartz, J. K., Sazanovich, IV, … Lindsey, J. S. (2003). Synthesis and excited-state photodynamics of a perylene-monoimide-oxochlorin dyad. A light-harvesting array. JOURNAL OF PHYSICAL CHEMISTRY B, 107(15), 3431–3442. https://doi.org/10.1021/jp026941a Kirmaier, C., Hindin, E., Schwartz, J. K., Sazanovich, IV, Diers, JR, Muthukumaran, K., … Holten, D. (2003). Synthesis and excited-state photodynamics of perylene-bis(imide)-oxochlorin dyads. A charge-separation motif. JOURNAL OF PHYSICAL CHEMISTRY B, 107(15), 3443–3454. https://doi.org/10.1021/jp0269423 Tomizaki, K. Y., Yu, L. H., Wei, L. Y., Bocian, D. F., & Lindsey, J. S. (2003). Synthesis of cyclic hexameric porphyrin arrays. Anchors for surface immobilization and columnar self-assembly. JOURNAL OF ORGANIC CHEMISTRY, 68(21), 8199–8207. https://doi.org/10.1021/jo034861c Matsumoto, T., Du, H., & Lindsey, J. S. (2002). A parallel simplex search method for use with an automated chemistry workstation. CHEMOMETRICS AND INTELLIGENT LABORATORY SYSTEMS, 62(2), 129–147. https://doi.org/10.1016/S0169-7439(02)00010-2 Matsumoto, T., Du, H., & Lindsey, J. S. (2002). A two-tiered strategy for simplex and multidirectional optimization of reactions with an automated chemistry workstation. CHEMOMETRICS AND INTELLIGENT LABORATORY SYSTEMS, 62(2), 149–158. https://doi.org/10.1016/S0169-7439(02)00011-4 Chevalier, F., Geier, G. R., & Lindsey, J. S. (2002). Acidolysis of intermediates used in the preparation of core-modified porphyrinic macrocycles. JOURNAL OF PORPHYRINS AND PHTHALOCYANINES, 6(3), 186–197. https://doi.org/10.1142/S108842460200021X Du, H., & Lindsey, J. S. (2002). An approach for parallel and adaptive screening of discrete compounds followed by reaction optimization using an automated chemistry workstation. CHEMOMETRICS AND INTELLIGENT LABORATORY SYSTEMS, 62(2), 159–170. https://doi.org/10.1016/S0169-7439(02)00012-6 Dixon, J. M., Du, H., Cork, D. G., & Lindsey, J. S. (2002). An experiment planner for performing successive focused grid searches with an automated chemistry workstation. CHEMOMETRICS AND INTELLIGENT LABORATORY SYSTEMS, 62(2), 115–128. https://doi.org/10.1016/S0169-7439(02)00009-6 Li, Q. L., Mathur, G., Homsi, M., Surthi, S., Misra, V., Malinovskii, V., … Kuhr, W. G. (2002). Capacitance and conductance characterization of ferrocene-containing self-assembled monolayers on silicon surfaces for memory applications. APPLIED PHYSICS LETTERS, 81(8), 1494–1496. https://doi.org/10.1063/1.1500781 Roth, K. M., Lindsey, J. S., Bocian, D. F., & Kuhr, W. G. (2002). Characterization of charge storage in redox-active self-assembled monolayers. LANGMUIR, 18(10), 4030–4040. https://doi.org/10.1021/la025525e Roth, K. M., Gryko, D. T., Clausen, C., Li, J. Z., Lindsey, J. S., Kuhr, W. G., & Bocian, D. F. (2002). Comparison of electron-transfer and charge-retention characteristics of porphyrin-containing self-assembled monolayers designed for molecular information storage. JOURNAL OF PHYSICAL CHEMISTRY B, 106(34), 8639–8648. https://doi.org/10.1021/jp025850a Loewe, R. S., Lammi, R. K., Diers, JR, Kirmaier, C., Bocian, D. F., Holten, D., & Lindsey, J. S. (2002). Design and synthesis of light-harvesting rods for intrinsic rectification of the migration of excited-state energy and ground-state holes. JOURNAL OF MATERIALS CHEMISTRY, 12(5), 1530–1552. https://doi.org/10.1039/b108168c Schweikart, K. H., Malinovskii, V. L., Diers, JR, Yasseri, A. A., Bocian, D. F., Kuhr, W. G., & Lindsey, J. S. (2002). Design, synthesis, and characterization of prototypical multistate counters in three distinct architectures. JOURNAL OF MATERIALS CHEMISTRY, 12(4), 808–828. https://doi.org/10.1039/b108520d Geier, G. R., & Lindsey, J. S. (2002). Effects of diverse acid catalysts on the reaction course in the two-step one-flask synthesis of meso-tetraphenylporphyrin. JOURNAL OF PORPHYRINS AND PHTHALOCYANINES, 6(3), 159–185. https://doi.org/10.1142/S1088424602000208 Kodis, G., Liddell, P. A., Garza, L., Clausen, P. C., Lindsey, J. S., Moore, A. L., … Gust, D. (2002). Efficient energy transfer and electron transfer in an artificial photosynthetic antenna-reaction center complex. JOURNAL OF PHYSICAL CHEMISTRY A, 106(10), 2036–2048. https://doi.org/10.1021/jp012133s Youngblood, W. J., Gryko, D. T., Lammi, R. K., Bocian, D. F., Holten, D., & Lindsey, J. S. (2002). Glaser-mediated synthesis and photophysical characterization of diphenylbutadiyne-linked porphyrin dyads. JOURNAL OF ORGANIC CHEMISTRY, 67(7), 2111–2117. https://doi.org/10.1021/jo016150p Roth, K. M., Yasseri, A. A., Liu, Z. M., Dabke, R. B., Malinovskii, V., Schweikart, K. H., … Bocian, D. F. (2003). Measurements of electron-transfer rates of charge-storage molecular monolayers on Si(100). Toward hybrid molecular/semiconductor information storage devices. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 125(2), 505–517. https://doi.org/10.1021/ja021169a Taniguchi, M., Kim, H. J., Ra, D. Y., Schwartz, J. K., Kirmaier, C., Hindin, E., … Lindsey, J. S. (2002). Synthesis and electronic properties of regioisomerically pure oxochlorins. JOURNAL OF ORGANIC CHEMISTRY, 67(21), 7329–7342. https://doi.org/10.1021/jo025843i Kirmaier, C., Yang, S. I., Prathapan, S., Miller, M. A., Diers, JR, Bocian, D. F., … Holten, D. (2002). [Review of Synthesis and excited-state photodynamics of perylene-porphyrin dyads. 4. Ultrafast charge separation and charge recombination between tightly coupled units in polar media]. RESEARCH ON CHEMICAL INTERMEDIATES, 28(7-9), 719–740. https://doi.org/10.1163/15685670260469384 Tomizaki, K., Loewe, R. S., Kirmaier, C., Schwartz, J. K., Retsek, J. L., Bocian, D. F., … Lindsey, J. S. (2002). Synthesis and photophysical properties of light-harvesting arrays comprised of a porphyrin bearing multiple perylene-monoimide accessory pigments. JOURNAL OF ORGANIC CHEMISTRY, 67(18), 6519–6534. https://doi.org/10.1021/jo0258002 Loewe, R. S., Tomizaki, K., Youngblood, W. J., Bo, Z. S., & Lindsey, J. S. (2002). Synthesis of perylene-porphyrin building blocks and rod-like oligomers for light-harvesting applications. JOURNAL OF MATERIALS CHEMISTRY, 12(12), 3438–3451. https://doi.org/10.1039/b205680a Loewe, R. S., Tomizaki, K. Y., Chevalier, F., & Lindsey, J. S. (2002). Synthesis of perylene-porphyrin dyads for light-harvesting studies. JOURNAL OF PORPHYRINS AND PHTHALOCYANINES, 6(9-10), 626–642. https://doi.org/10.1142/S1088424602000774 Ambroise, A., Kirmaier, C., Wagner, R. W., Loewe, R. S., Bocian, D. F., Holten, D., & Lindsey, J. S. (2002). Weakly coupled molecular photonic wires: Synthesis and excited-state energy-transfer dynamics. JOURNAL OF ORGANIC CHEMISTRY, 67(11), 3811–3826. https://doi.org/10.1021/jo025561i Geier, G. R., Callinan, J. B., Rao, P. D., & Lindsey, J. S. (2001). A survey of acid catalysts in dipyrromethanecarbinol condensations leading to meso-substituted porphyrins. JOURNAL OF PORPHYRINS AND PHTHALOCYANINES, 5(12), 810–823. https://doi.org/10.1002/jpp.387 Ambroise, A., Wagner, R. W., Rao, P. D., Riggs, J. A., Hascoat, P., Diers, JR, … Lindsey, J. S. (2001). Design and synthesis of porphyrin-based optoelectronic gates. CHEMISTRY OF MATERIALS, 13(3), 1023–1034. https://doi.org/10.1021/cm000773m Geier, G. R., Riggs, J. A., & Lindsey, J. S. (2001). Investigation of acid cocatalysis in syntheses of tetra-phenylporphyrin. JOURNAL OF PORPHYRINS AND PHTHALOCYANINES, 5(9), 681–690. https://doi.org/10.1002/jpp.380.abs Geier, G. R., & Lindsey, J. S. (2001). Investigation of porphyrin-forming reactions. Part 1. Pyrrole plus aldehyde oligomerization in two-step, one-flask syntheses of meso-substituted porphyrins. JOURNAL OF THE CHEMICAL SOCIETY-PERKIN TRANSACTIONS 2, (5), 677–686. https://doi.org/10.1039/b009088n Geier, G. R., & Lindsey, J. S. (2001). Investigation of porphyrin-forming reactions. Part 2. Examination of the reaction course in two-step, one-flask syntheses of meso-substituted porphyrins. JOURNAL OF THE CHEMICAL SOCIETY-PERKIN TRANSACTIONS 2, (5), 687–700. https://doi.org/10.1039/b009092l Geier, G. R., Littler, B. J., & Lindsey, J. S. (2001). Investigation of porphyrin-forming reactions. Part 3. The origin of scrambling in dipyrromethane plus aldehyde condensations yielding trans-A(2)B(2)-tetraarylporphyrins. JOURNAL OF THE CHEMICAL SOCIETY-PERKIN TRANSACTIONS 2, (5), 701–711. https://doi.org/10.1039/b009098k Geier, G. R., Littler, B. J., & Lindsey, J. S. (2001). Investigation of porphyrin-forming reactions. Part 4. Examination of the reaction course in syntheses of porphyrins via dipyrromethanecarbinols. JOURNAL OF THE CHEMICAL SOCIETY-PERKIN TRANSACTIONS 2, (5), 712–718. https://doi.org/10.1039/b009101o Gross, T., Chevalier, F., & Lindsey, J. S. (2001). Investigation of rational syntheses of heteroleptic porphyrinic lanthanide (europium, cerium) triple-decker sandwich complexes. INORGANIC CHEMISTRY, 40(18), 4762–4774. https://doi.org/10.1021/ic0101634 Yu, L. H., & Lindsey, J. S. (2001). Investigation of two rational routes for preparing p-phenylene-linked porphyrin trimers. TETRAHEDRON, 57(45), 9285–9298. https://doi.org/10.1016/S0040-4020(01)00928-0 Lammi, R. K., Wagner, R. W., Ambroise, A., Diers, JR, Bocian, D. F., Holten, D., & Lindsey, J. S. (2001). Mechanisms of excited-state energy-transfer gating in linear versus branched multiporphyrin arrays. JOURNAL OF PHYSICAL CHEMISTRY B, 105(22), 5341–5352. https://doi.org/10.1021/jp010857y Holten, D., Bocian, D. F., & Lindsey, J. S. (2002). [Review of Probing electronic communication in covalently linked multiporphyrin arrays. A guide to the rational design of molecular photonic devices]. ACCOUNTS OF CHEMICAL RESEARCH, 35(1), 57–69. https://doi.org/10.1021/ar970264z Lammi, R. K., Ambroise, A., Wagner, R. W., Diers, JR, Bocian, D. F., Holten, D., & Lindsey, J. S. (2001). Quenching of porphyrin excited states by adjacent or distant porphyrin cation radicals in molecular arrays. CHEMICAL PHYSICS LETTERS, 341(1-2), 35–44. https://doi.org/10.1016/S0009-2614(01)00452-3 Yu, L. H., & Lindsey, J. S. (2001). Rational syntheses of cyclic hexameric porphyrin arrays for studies of self-assembling light-harvesting systems. JOURNAL OF ORGANIC CHEMISTRY, 66(22), 7402–7419. https://doi.org/10.1021/jo010742q Gryko, D., Li, J. Z., Diers, JR, Roth, K. M., Bocian, D. F., Kuhr, W. G., & Lindsey, J. S. (2001). Studies related to the design and synthesis of a molecular octal counter. JOURNAL OF MATERIALS CHEMISTRY, 11(4), 1162–1180. https://doi.org/10.1039/b008224o Yang, S. I., Prathapan, S., Miller, M. A., Seth, J., Bocian, D. F., Lindsey, J. S., & Holten, D. (2001). Synthesis and excited-state photodynamics in perylene-porphyrin dyads 2. Effects of porphyrin metalation state on the energy-transfer, charge-transfer, and deactivation channels. JOURNAL OF PHYSICAL CHEMISTRY B, 105(34), 8249–8258. https://doi.org/10.1021/jp010336a Prathapan, S., Yang, S. I., Seth, J., Miller, M. A., Bocian, D. F., Holten, D., & Lindsey, J. S. (2001). Synthesis and excited-state photodynamics of perylene-porphyrin dyads. 1. Parallel energy and charge transfer via a diphenylethyne linker. JOURNAL OF PHYSICAL CHEMISTRY B, 105(34), 8237–8248. https://doi.org/10.1021/jp010335i Yang, S. I., Lammi, R. K., Prathapan, S., Miller, M. A., Seth, J., Diers, J. R., … Holten, D. (2001). Synthesis and excited-state photodynamics of perylene-porphyrindyads. Part 3, Effects of perylene, linker, and connectivity on ultrafast energy transfer. Journal of Materials Chemistry, 11(10), 2420–2430. https://doi.org/10.1039/b102741g Taniguchi, M., Ra, D., Mo, G., Balasubramanian, T., & Lindsey, J. S. (2001). Synthesis of meso-substituted chlorins via tetrahydrobilene-a intermediates. JOURNAL OF ORGANIC CHEMISTRY, 66(22), 7342–7354. https://doi.org/10.1021/jo0104835 Ambroise, A., Li, J. Z., Yu, L. H., & Lindsey, J. S. (2000). A self-assembled light-harvesting array of seven porphyrins in a wheel and spoke architecture. ORGANIC LETTERS, 2(17), 2563–2566. https://doi.org/10.1021/ol006036d Geier, G. R., Ciringh, Y., Li, F. R., Haynes, D. M., & Lindsey, J. S. (2000). A survey of acid catalysts for use in two-step, one-flask syntheses of meso-substituted porphyrinic macrocycles. ORGANIC LETTERS, 2(12), 1745–1748. https://doi.org/10.1021/ol005917h Miller, M. A., Lammi, R. K., Prathapan, S., Holten, D., & Lindsey, J. S. (2000). A tightly coupled linear array of perylene, bis(porphyrin), and phthalocyanine units that functions as a photoinduced energy-transfer cascade. JOURNAL OF ORGANIC CHEMISTRY, 65(20), 6634–6649. https://doi.org/10.1021/jo0007940 Rao, P. D., Littler, B. J., Geier, G. R., & Lindsey, J. S. (2000). Efficient synthesis of monoacyl dipyrromethanes and their use in the preparation of sterically unhindered trans-porphyrins. JOURNAL OF ORGANIC CHEMISTRY, 65(4), 1084–1092. https://doi.org/10.1021/jo9915473 Clausen, C., Gryko, D. T., Yasseri, A. A., Diers, JR, Bocian, D. F., Kuhr, W. G., & Lindsey, J. S. (2000). Investigation of tightly coupled porphyrin arrays comprised of identical monomers for multibit information storage. JOURNAL OF ORGANIC CHEMISTRY, 65(22), 7371–7378. https://doi.org/10.1021/jo000489e Rao, P. D., Dhanalekshmi, S., Littler, B. J., & Lindsey, J. S. (2000). Rational syntheses of porphyrins bearing up to four different meso substituents. JOURNAL OF ORGANIC CHEMISTRY, 65(22), 7323–7344. https://doi.org/10.1021/jo000882k Balasubramanian, T., Strachan, J. P., Boyle, P. D., & Lindsey, J. S. (2000). Rational synthesis of beta-substituted chlorin building blocks. JOURNAL OF ORGANIC CHEMISTRY, 65(23), 7919–7929. https://doi.org/10.1021/jo000913b Strachan, J. P., DF O'Shea, Balasubramanian, T., & Lindsey, J. S. (2000). Rational synthesis of meso-substituted chlorin building blocks. JOURNAL OF ORGANIC CHEMISTRY, 65(10), 3160–3172. https://doi.org/10.1021/jo991942t Gryko, D., & Lindsey, J. S. (2000). Rational synthesis of meso-substituted porphyrins bearing one nitrogen heterocyclic group. JOURNAL OF ORGANIC CHEMISTRY, 65(7), 2249–2252. https://doi.org/10.1021/jo9918100 Lammi, R. K., Ambroise, A., Balasubramanian, T., Wagner, R. W., Bocian, D. F., Holten, D., & Lindsey, J. S. (2000). Structural control of photoinduced energy transfer between adjacent and distant sites in multiporphyrin arrays. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 122(31), 7579–7591. https://doi.org/10.1021/ja001031x Yang, S. I., Li, J. Z., Cho, H. S., Kim, D., Bocian, D. F., Holten, D., & Lindsey, J. (2000). Synthesis and excited-state photodynamics of phenylethyne- linked porphyrin-phthalocyanine dyads. Journal of Materials Chemistry, 10(2), 283–296. https://doi.org/10.1039/a906273d Gryko, D. T., Clausen, C., Roth, K. M., Dontha, N., Bocian, D. F., Kuhr, W. G., & Lindsey, J. S. (2000). Synthesis of "porphyrin-linker-thiol" molecules with diverse linkers for studies of molecular-based information storage. JOURNAL OF ORGANIC CHEMISTRY, 65(22), 7345–7355. https://doi.org/10.1021/jo000487u Li, J. Z., Gryko, D., Dabke, R. B., Diers, JR, Bocian, D. F., Kuhr, W. G., & Lindsey, J. S. (2000). Synthesis of thiol-derivatized europium porphyrinic triple-decker sandwich complexes for multibit molecular information storage. JOURNAL OF ORGANIC CHEMISTRY, 65(22), 7379–7390. https://doi.org/10.1021/jo000490d Gryko, D. T., Zhao, F., Yasseri, A. A., Roth, K. M., Bocian, D. F., Kuhr, W. G., & Lindsey, J. S. (2000). Synthesis of thiol-derivatized ferrocene-porphyrins for studies of multibit information storage. JOURNAL OF ORGANIC CHEMISTRY, 65(22), 7356–7362. https://doi.org/10.1021/jo0004862 Clausen, C., Gryko, D. T., Dabke, R. B., Dontha, N., Bocian, D. F., Kuhr, W. G., & Lindsey, J. S. (2000). Synthesis of thiol-derivatized porphyrin dimers and trimers for studies of architectural effects on multibit information storage. JOURNAL OF ORGANIC CHEMISTRY, 65(22), 7363–7370. https://doi.org/10.1021/jo000488m Kuo, P. Y., Du, H., Corkan, L. A., Yang, K. X., & Lindsey, J. S. (1999). A planning module for performing grid search, factorial design, and related combinatorial studies on an automated chemistry workstation. CHEMOMETRICS AND INTELLIGENT LABORATORY SYSTEMS, 48(2), 219–234. https://doi.org/10.1016/S0169-7439(99)00021-0 Kuciauskas, D., Liddell, P. A., Lin, S., Johnson, T. E., Weghorn, S. J., Lindsey, J. S., … Gust, D. (1999). An artificial photosynthetic antenna-reaction center complex. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 121(37), 8604–8614. https://doi.org/10.1021/ja991255j Du, H., Corkan, L. A., Yang, K. X., Kuo, P. Y., & Lindsey, J. S. (1999). An automated microscale chemistry workstation capable of parallel, adaptive experimentation. CHEMOMETRICS AND INTELLIGENT LABORATORY SYSTEMS, 48(2), 181–203. https://doi.org/10.1016/S0169-7439(99)00019-2 Geier, G. R., Haynes, D. M., & Lindsey, J. S. (1999). An efficient one-flask synthesis of N-confused tetraphenylporphyrin. ORGANIC LETTERS, 1(9), 1455–1458. https://doi.org/10.1021/ol9910114 Du, H., Shen, W., Kuo, P. Y., & Lindsey, J. S. (1999). Decision-tree programs for an adaptive automated chemistry workstation. Application to catalyst screening experiments. CHEMOMETRICS AND INTELLIGENT LABORATORY SYSTEMS, 48(2), 205–217. https://doi.org/10.1016/S0169-7439(99)00020-9 Hascoat, P., Yang, S. I., Lammi, R. K., Alley, J., Bocian, D. F., Lindsey, J. S., & Holten, D. (1999). Effects of metalation state (Free base, Mg, Zn, Cd) on excited-state energy transfer in diarylethyne-linked porphyrin dimers. INORGANIC CHEMISTRY, 38(21), 4849–4853. https://doi.org/10.1021/ic990469z Li, J. Z., & Lindsey, J. S. (1999). Efficient synthesis of light-harvesting arrays composed of eight porphyrins and one phthalocyanine. JOURNAL OF ORGANIC CHEMISTRY, 64(25), 9101–9108. https://doi.org/10.1021/jo991102e Cork, D. G., Sugawara, T., Lindsey, J., Corkan, L. A., & Du, H. (1999). Further development of a versatile microscale automated workstation for parallel adaptive experimentation. Laboratory Robotics and Automation, 11(4), 217–223. https://doi.org/10.1002/(SICI)1098-2728(1999)11:4<217::AID-LRA6>3.3.CO;2-3 Yang, S. I., Seth, J., Strachan, J. P., Gentemann, S., Kim, D., Holten, D., … Bocian, D. F. (1999). Ground and excited state electronic properties of halogenated tetraarylporphyrins. Tuning the building blocks for porphyrin- based photonic devices. Journal of Porphyrins and Phthalocyanines, 3(2), 117–147. https://doi.org/10.1002/(SICI)1099-1409(199902)3:2<117::AID-JPP110>3.0.CO;2-X Du, H., Jindal, S., & Lindsey, J. S. (1999). Implementation of the multidirectional search algorithm on an automated chemistry workstation. A parallel yet adaptive approach for reaction optimization. CHEMOMETRICS AND INTELLIGENT LABORATORY SYSTEMS, 48(2), 235–256. https://doi.org/10.1016/S0169-7439(99)00022-2 Yang, S. I., Seth, J., Balasubramanian, T., Kim, D., Lindsey, J. S., Holten, D., & Bocian, D. F. (1999). Interplay of orbital tuning and linker location in controlling electronic communication in porphyrin arrays. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 121(16), 4008–4018. https://doi.org/10.1021/ja9842060 Wagner, R. W., Ciringh, Y., Clausen, C., & Lindsey, J. S. (1999). Investigation and refinement of palladium-coupling conditions for the synthesis of diarylethyne-linked multiporphyrin arrays. CHEMISTRY OF MATERIALS, 11(10), 2974–2983. https://doi.org/10.1021/cm9903529 Srinivasan, N., Haney, C. A., Lindsey, J. S., Zhang, W. Z., & Chait, B. T. (1999). Investigation of MALDI-TOF mass spectrometry of diverse synthetic metalloporphyrins, phthalocyanines and multiporphyrin arrays. JOURNAL OF PORPHYRINS AND PHTHALOCYANINES, 3(4), 283–291. https://doi.org/10.1002/(SICI)1099-1409(199904)3:4<283::AID-JPP132>3.0.CO;2-F Littler, B. J., Ciringh, Y., & Lindsey, J. S. (1999). Investigation of conditions giving minimal scrambling in the synthesis of trans-porphyrins from dipyrromethanes and aldehydes. JOURNAL OF ORGANIC CHEMISTRY, 64(8), 2864–2872. https://doi.org/10.1021/jo982452o Geier, G. R., & Lindsey, J. S. (1999). N-confused tetraphenylporphyrin and tetraphenylsapphyrin formation in one-flask syntheses of tetraphenylporphyrin. JOURNAL OF ORGANIC CHEMISTRY, 64(5), 1596–1603. https://doi.org/10.1021/jo982068r Cho, W. S., Kim, H. J., Littler, B. J., Miller, M. A., Lee, C. H., & Lindsey, J. S. (1999). Rational synthesis of trans-substituted porphyrin building blocks containing one sulfur or oxygen atom in place of nitrogen at a designated site. JOURNAL OF ORGANIC CHEMISTRY, 64(21), 7890–7901. https://doi.org/10.1021/jo9909305 Littler, B. J., Miller, M. A., Hung, C. H., Wagner, R. W., DF O'Shea, Boyle, P. D., & Lindsey, J. S. (1999). Refined synthesis of 5-substituted dipyrromethanes. JOURNAL OF ORGANIC CHEMISTRY, 64(4), 1391–1396. https://doi.org/10.1021/jo982015+ Li, J. Z., Diers, JR, Seth, J., Yang, S. I., Bocian, D. F., Holten, D., & Lindsey, J. S. (1999). Synthesis and properties of star-shaped multiporphyrin-phthalocyanine light-harvesting arrays. JOURNAL OF ORGANIC CHEMISTRY, 64(25), 9090–9100. https://doi.org/10.1021/jo991001g Balasubramanian, T., & Lindsey, J. S. (1999). Synthesis of beta-substituted porphyrin building blocks and conversion to diphenylethyne-linked porphyrin dimers. TETRAHEDRON, 55(22), 6771–6784. https://doi.org/10.1016/S0040-4020(99)00339-7 Li, J. Z., Ambroise, A., Yang, S. I., Diers, JR, Seth, J., Wack, C. R., … Lindsey, J. S. (1999). Template-directed synthesis, excited-state photodynamics, and electronic communication in a hexameric wheel of porphyrins. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 121(38), 8927–8940. https://doi.org/10.1021/ja991730d Gryko, D. T., Clausen, C., & Lindsey, J. S. (1999). Thiol-derivatized porphyrins for attachment to electroactive surfaces. JOURNAL OF ORGANIC CHEMISTRY, 64(23), 8635–8647. https://doi.org/10.1021/jo9911084 Ciringh, Y., & Lindsey, J. S. (1998). Analysis of sugar phosphates and related compounds using capillary zone electrophoresis with indirect UV detection. JOURNAL OF CHROMATOGRAPHY A, 816(2), 251–259. https://doi.org/10.1016/S0021-9673(98)00488-9 Li, F. R., Yang, S. I., Ciringh, Y. Z., Seth, J., Martin, C. H., Singh, D. L., … Lindsey, J. S. (1998). Design, synthesis, and photodynamics of light-harvesting arrays comprised of a porphyrin and one, two, or eight boron-dipyrrin accessory pigments. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 120(39), 10001–10017. https://doi.org/10.1021/ja9812047 Van Patten, P. G., Shreve, A. P., Lindsey, J. S., & Donohoe, R. J. (1998). Energy-transfer modeling for the rational design of multiporphyrin light-harvesting arrays. JOURNAL OF PHYSICAL CHEMISTRY B, 102(21), 4209–4216. https://doi.org/10.1021/jp972304m Yang, S. I., Lammi, R. K., Seth, J., Riggs, J. A., Arai, T., Kim, D. H., … Lindsey, J. S. (1998). Excited-state energy transfer and ground-state hole electron hopping in p-phenylene-linked porphyrin dimers. JOURNAL OF PHYSICAL CHEMISTRY B, 102(47), 9426–9436. https://doi.org/10.1021/jp982729o Wagner, R. W., Li, F. R., Du, H., & Lindsey, J. S. (1999). Investigation of cocatalysis conditions using an automated microscale multireactor workstation: Synthesis of meso-tetramesitylporphypin. ORGANIC PROCESS RESEARCH & DEVELOPMENT, 3(1), 28–37. https://doi.org/10.1021/op9800459 Du, H., Fuh, R. C. A., Li, J. Z., Corkan, L. A., & Lindsey, J. (1998). PhotochemCAD: A computer-aided design and research tool in photochemistry. Photochemistry and Photobiology, 68(2), 141–142. https://doi.org/10.1562/0031-8655(1998)068<0141:PACADA>2.3.CO;2 Strachan, J. P., Gentemann, S., Seth, J., Kalsbeck, W. A., Lindsey, J. S., Holten, D., & Bocian, D. F. (1998). Synthesis and characterization of tetrachlorodiarylethyne-linked porphyrin dimers. Effects of linker architecture on intradimer electronic communication. INORGANIC CHEMISTRY, 37(6), 1191–1201. https://doi.org/10.1021/ic970967c Wagner, R. W., Seth, J., Yang, S. I., Kim, D., Bocian, D. F., Holten, D., & Lindsey, J. S. (1998). Synthesis and excited-state photodynamics of a molecular square containing four mutually coplanar porphyrins. JOURNAL OF ORGANIC CHEMISTRY, 63(15), 5042–5049. https://doi.org/10.1021/jo9803683 Ravikanth, M., Strachan, J. P., Li, F. R., & Lindsey, J. S. (1998). Trans-substituted porphyrin building blocks bearing iodo and ethynyl groups for applications in bioorganic and materials chemistry. TETRAHEDRON, 54(27), 7721–7734. https://doi.org/10.1016/S0040-4020(98)00408-6 Li, F. R., Yang, K. X., Tyhonas, J. S., MacCrum, K. A., & Lindsey, J. S. (1997). Beneficial effects of salts on an acid-catalyzed condensation leading to porphyrin formation. TETRAHEDRON, 53(37), 12339–12360. https://doi.org/10.1016/S0040-4020(97)00770-9 Li, F. R., Gentemann, S., Kalsbeck, W. A., Seth, J., Lindsey, J. S., Holten, D., & Bocian, D. F. (1997). [Review of Effects of central metal ion (Mg, Zn) and solvent on singlet excited-state energy flow in porphyrin-based nanostructures]. JOURNAL OF MATERIALS CHEMISTRY, 7(7), 1245–1262. https://doi.org/10.1039/a700146k Strachan, J. P., Gentemann, S., Seth, J., Kalsbeck, W. A., Lindsey, J. S., Holten, D., & Bocian, D. F. (1997). Effects of orbital ordering on electronic communication in multiporphyrin arrays. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 119(46), 11191–11201. https://doi.org/10.1021/ja971678q Wagner, R. W., Johnson, T. E., & Lindsey, J. S. (1997). Investigation of the one-flask synthesis of porphyrins bearing meso-linked straps of variable length, rigidity, and redox activity. TETRAHEDRON, 53(20), 6755–6790. https://doi.org/10.1016/S0040-4020(97)00327-X Wagner, R. W., & Lindsey, J. S. (1996, July). Boron-dipyrromethene dyes for incorporation in synthetic multi-pigment light-harvesting arrays. PURE AND APPLIED CHEMISTRY, Vol. 68, pp. 1373–1380. https://doi.org/10.1351/pac199668071373 Wagner, R. W., Johnson, T. E., & Lindsey, J. S. (1996). [Review of Soluble synthetic multiporphyrin arrays .1. Modular design and synthesis]. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 118(45), 11166–11180. https://doi.org/10.1021/ja961611n Hsiao, J. S., Krueger, B. P., Wagner, R. W., Johnson, T. E., Delaney, J. K., Mauzerall, D. C., … Donohoe, R. J. (1996). Soluble synthetic multiporphyrin arrays .2. Photodynamics of energy-transfer processes. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 118(45), 11181–11193. https://doi.org/10.1021/ja961612f