Douglas E. Brown

Works (16)

Updated: July 5th, 2023 16:00
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2011 journal article

Diverse and tissue-enriched small RNAs in the plant pathogenic fungus, Magnaporthe oryzae

BMC Genomics, 12.

By: C. Nunes n, M. Gowda  n, J. Sailsbery n, M. Xue n, F. Chen *, D. Brown n, Y. Oh n, T. Mitchell*, R. Dean n 

co-author countries: China πŸ‡¨πŸ‡³ United States of America πŸ‡ΊπŸ‡Έ
MeSH headings : Base Sequence; DNA, Intergenic / genetics; Gene Expression Profiling; Hyphae / genetics; Magnaporthe / genetics; Magnaporthe / physiology; Molecular Sequence Data; Plants / microbiology; RNA, Fungal / genetics; RNA, Small Untranslated / genetics; RNA, Transfer / genetics; Repetitive Sequences, Nucleic Acid / genetics; Sequence Analysis, RNA
Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2009 review

Gene Ontology annotation of the rice blast fungus, Magnaporthe oryzae

[Review of ]. BMC MICROBIOLOGY, 9.

By: S. Meng n, D. Brown n, D. Ebbole *, T. Torto-Alalibo*, Y. Oh n, J. Deng n, T. Mitchell n, R. Dean n 

co-author countries: United States of America πŸ‡ΊπŸ‡Έ
MeSH headings : Computational Biology; Databases, Protein; Fungal Proteins / genetics; Genome, Fungal; Magnaporthe / genetics; Oryza / microbiology; Sequence Alignment; Sequence Analysis, Protein; Terminology as Topic; Vocabulary, Controlled
Sources: Web Of Science, ORCID
Added: August 6, 2018

2008 review

Transcriptome analysis reveals new insight into appressorium formation and function in the rice blast fungus Magnaporthe oryzae

[Review of ]. GENOME BIOLOGY, 9(5).

By: Y. Oh n, N. Donofrio n, H. Pan n, S. Coughlan*, D. Brown n, S. Meng n, T. Mitchell n, R. Dean n 

co-author countries: United States of America πŸ‡ΊπŸ‡Έ
MeSH headings : Cell Wall / chemistry; Cell Wall / metabolism; Fungal Proteins / genetics; Fungal Proteins / metabolism; Gene Expression Profiling; Gene Expression Regulation, Fungal; Lipid Metabolism; Magnaporthe / cytology; Magnaporthe / genetics; Magnaporthe / physiology; Signal Transduction; Spores, Fungal / cytology; Spores, Fungal / genetics
Sources: Web Of Science, ORCID
Added: August 6, 2018

2007 journal article

A systematic analysis of T-DNA insertion events in Magnaporthe oryzae

FUNGAL GENETICS AND BIOLOGY, 44(10), 1050–1064.

By: Y. Meng *, G. Patel *, M. Heist*, M. Betts*, S. Tucker*, N. Galadima*, N. Donofrio n, D. Brown n ...

co-author countries: United States of America πŸ‡ΊπŸ‡Έ
author keywords: agrobacterium-mediated transformation; insertional mutagenesis; inverse PCR
MeSH headings : 3' Flanking Region; 5' Flanking Region; Agrobacterium tumefaciens / genetics; Chromosomes, Fungal; DNA, Bacterial / analysis; DNA, Bacterial / genetics; Genome, Fungal; Magnaporthe / genetics; Mutagenesis, Insertional; Repetitive Sequences, Nucleic Acid; Transformation, Genetic
Sources: Web Of Science, ORCID
Added: August 6, 2018

2007 journal article

Development of a high throughput transformation system for insertional mutagenesis in Magnaporthe oryzae

FUNGAL GENETICS AND BIOLOGY, 44(10), 1035–1049.

By: M. Betts*, S. Tucker*, N. Galadima*, Y. Meng *, G. Patel *, L. Li *, N. Donofrio n, A. Floyd n ...

co-author countries: United States of America πŸ‡ΊπŸ‡Έ
author keywords: Magnaporthe oryzae; Insertional mutagenesis; Agrobacterium tumefaciens-mediated transformation; CaCl2/PEG-mediated transformation; pathogenicity
MeSH headings : 3' Flanking Region; 5' Flanking Region; Agrobacterium tumefaciens / genetics; Magnaporthe / genetics; Mutagenesis, Insertional / methods; Phenotype; Protoplasts; Transformation, Genetic
Sources: Web Of Science, ORCID
Added: August 6, 2018

2006 journal article

Global gene expression during nitrogen starvation in the rice blast fungus, Magnaporthe grisea

FUNGAL GENETICS AND BIOLOGY, 43(9), 605–617.

By: N. Donofrio*, Y. Oh, R. Lundy, H. Pan*, D. Brown*, J. Jeong*, S. Coughlan, T. Mitchell*, R. Dean* 

author keywords: nitrogen limitation; GATA transcription factors; metabolism; SPM1; protease; targeted gene disruption; pathogenicity
MeSH headings : Amino Acids / metabolism; Binding Sites; Biological Transport / genetics; DNA-Binding Proteins / genetics; GATA Transcription Factors / metabolism; Gene Expression; Gene Expression Regulation, Fungal; Genes, Fungal; Magnaporthe / genetics; Magnaporthe / pathogenicity; Nitrogen / metabolism; Oligonucleotide Array Sequence Analysis; Oryza / metabolism; Oryza / microbiology; Plant Diseases / microbiology; Promoter Regions, Genetic; Serine Endopeptidases / genetics
Sources: Web Of Science, ORCID
Added: August 6, 2018

2006 journal article

MGOS: A resource for studying Magnaporthe grisea and Oryza sativa interactions

MOLECULAR PLANT-MICROBE INTERACTIONS, 19(10), 1055–1061.

By: C. Soderlund, K. Haller, V. Pampanwar, D. Ebbole, M. Farman, M. Orbach, G. Wang, R. Wing ...

author keywords: host-pathogen
MeSH headings : Computational Biology; DNA, Complementary / chemistry; Databases, Genetic; Expressed Sequence Tags; Gene Expression Profiling; Genome, Fungal; Genome, Plant; Internet; Magnaporthe / genetics; Magnaporthe / physiology; Mutation; Oligonucleotide Array Sequence Analysis; Oryza / genetics; Oryza / microbiology; Phenotype
Sources: Web Of Science, ORCID
Added: August 6, 2018

2006 review

Organization of chromosome ends in the rice blast fungus, Magnaporthe oryzae

[Review of ]. NUCLEIC ACIDS RESEARCH, 34(17), 4685–4701.

By: C. Rehmeyer*, W. Li*, M. Kusaba*, Y. Kim*, D. Brown n, C. Staben*, R. Dean n , M. Farman *

co-author countries: United States of America πŸ‡ΊπŸ‡Έ
MeSH headings : Adenosine Triphosphatases / genetics; Base Sequence; Chromosomes, Fungal / chemistry; DNA Helicases / genetics; DNA Transposable Elements; Fungal Proteins / genetics; Gene Duplication; Genes, Fungal; Magnaporthe / genetics; Magnaporthe / metabolism; Molecular Sequence Data; Oryza / microbiology; RecQ Helicases; Sequence Analysis, DNA; Telomere / chemistry; Terminology as Topic
Sources: Web Of Science, ORCID
Added: August 6, 2018

2006 article

Whole genome comparison of Aspergillus flavus and A-oryzae

Payne, G. A., Nierman, W. C., Wortman, J. R., Pritchard, B. L., Brown, D., Dean, R. A., … Yu, J. (2006, September). MEDICAL MYCOLOGY, Vol. 44, pp. S9–S11.

By: G. Payne n, W. Nierman, J. Wortman, B. Pritchard n, D. Brown n, R. Dean n , D. Bhatnagar, T. Cleveland, M. Machida, J. Yu

co-author countries: United States of America πŸ‡ΊπŸ‡Έ
author keywords: aflatoxin; secondary metabolism; koji moulds
Sources: Web Of Science, ORCID
Added: August 6, 2018

2005 journal article

Databases and information integration for the Medicago truncatula genome and transcriptome

PLANT PHYSIOLOGY, 138(1), 38–46.

By: S. Cannon  n, J. Crow  n, M. Heuer n, X. Wang  n, E. Cannon  n, C. Dwan n, A. Lamblin n, J. Vasdewani n ...

co-author countries: United States of America πŸ‡ΊπŸ‡Έ
MeSH headings : Base Sequence; Chromosomes, Artificial, Bacterial; Databases, Genetic; Genome, Plant; Internet; Medicago truncatula / genetics; Transcription, Genetic
Source: Web Of Science
Added: August 6, 2018

2005 journal article

PACLIMS: A component LIM system for high-throughput functional genomic analysis

BMC Bioinformatics, 6.

By: N. Donofrio, R. Rajagopalon, D. Brown, S. Diener, D. Windham, S. Nolin, A. Floyd, T. Mitchell ...

Source: NC State University Libraries
Added: August 6, 2018

2005 journal article

The genome sequence of the rice blast fungus Magnaporthe grisea

NATURE, 434(7036), 980–986.

By: R. Dean n , N. Talbot *, D. Ebbole *, M. Farman *, T. Mitchell n, M. Orbach *, M. Thon *, R. Kulkarni n ...

co-author countries: France πŸ‡«πŸ‡· United Kingdom of Great Britain and Northern Ireland πŸ‡¬πŸ‡§ Korea (Republic of) πŸ‡°πŸ‡· United States of America πŸ‡ΊπŸ‡Έ
MeSH headings : Fungal Proteins / genetics; Fungal Proteins / metabolism; Genes, Fungal / genetics; Genome, Fungal; Guanosine Diphosphate / metabolism; Guanosine Triphosphate / metabolism; Magnaporthe / classification; Magnaporthe / genetics; Magnaporthe / metabolism; Magnaporthe / pathogenicity; Oryza / microbiology; Plant Diseases / microbiology; Point Mutation / genetics; Proteome / genetics; Proteome / metabolism; Receptors, G-Protein-Coupled / genetics; Repetitive Sequences, Nucleic Acid / genetics; Saccharomyces cerevisiae / metabolism; Signal Transduction; Virulence / genetics
Sources: Web Of Science, ORCID
Added: August 6, 2018

2005 chapter

Trust-Based Secure Workflow Path Construction

In B. Benatallah, F. Casati, & P. Traverso (Eds.), Service-Oriented Computing – ICSOC 2007 (pp. 382–395).

By: M. Altunay n, D. Brown n, G. Byrd n  & R. Dean n 

co-author countries: United States of America πŸ‡ΊπŸ‡Έ

Contributors: M. Altunay n, D. Brown n, G. Byrd n  & R. Dean n 

Ed(s): B. Benatallah, F. Casati & P. Traverso

Sources: NC State University Libraries, ORCID, Crossref
Added: August 6, 2018

2003 review

The rice blast pathosystem as a case study for the development of new tools and raw materials for genome analysis of fungal plant pathogens

[Review of ]. NEW PHYTOLOGIST, 159(1), 53–61.

By: T. Mitchell n, M. Thon  n, J. Jeong n, D. Brown n, J. Deng n & R. Dean n 

co-author countries: United States of America πŸ‡ΊπŸ‡Έ
author keywords: Magnaporthe grisea; rice blast; genomic tools; BAC; physical map; synteny; whole genome comparison; fungi
Sources: Web Of Science, ORCID
Added: August 6, 2018

2003 journal article

Transcriptional regulation of biomass-degrading enzymes in the filamentous fungus Trichoderma reesei

JOURNAL OF BIOLOGICAL CHEMISTRY, 278(34), 31988–31997.

By: P. Foreman, D. Brown n, L. Dankmeyer, R. Dean n , S. Diener n, N. Dunn-Coleman, F. Goedegebuur, T. Houfek n ...

co-author countries: United States of America πŸ‡ΊπŸ‡Έ
MeSH headings : Biomass; DNA, Complementary; Enzymes / genetics; Enzymes / metabolism; Expressed Sequence Tags; Gene Expression Regulation, Enzymologic; Gene Expression Regulation, Fungal; Hydrolysis; Molecular Sequence Data; Transcription, Genetic; Trichoderma / enzymology
Sources: Web Of Science, ORCID
Added: August 6, 2018

2002 journal article

MagnaportheDB: a federated solution for integrating physical and genetic map data with BAC end derived sequences for the rice blast fungus Magnaporthe grisea

NUCLEIC ACIDS RESEARCH, 30(1), 121–124.

By: S. Martin n, B. Blackmon*, R. Rajagopalan n, T. Houfek n, R. Sceeles n, S. Denn n, T. Mitchell n, D. Brown n, R. Wing *, R. Dean n 

co-author countries: United States of America πŸ‡ΊπŸ‡Έ
MeSH headings : Base Sequence; Chromosome Mapping; Chromosomes, Artificial, Bacterial; Chromosomes, Fungal; Database Management Systems; Databases, Genetic; Forecasting; Genetic Markers; Genome, Fungal; Genomic Library; Information Storage and Retrieval; Internet; Magnaporthe / genetics; Oryza / microbiology; Plant Diseases
Sources: Web Of Science, ORCID
Added: August 6, 2018