2024 journal article
Transforming environmental health datasets from the comparative toxicogenomics database into chord diagrams to visualize molecular mechanisms
FRONTIERS IN TOXICOLOGY, 6.
2023 journal article
CTD tetramers: a new online tool that computationally links curated chemicals, genes, phenotypes, and diseases to inform molecular mechanisms for environmental health
TOXICOLOGICAL SCIENCES, 195(2), 155–168.
2022 article
Comparative Toxicogenomics Database (CTD): update 2023
Davis, A. P., Wiegers, T. C., Johnson, R. J., Sciaky, D., Wiegers, J., & Mattingly, C. J. (2022, September 28). NUCLEIC ACIDS RESEARCH, Vol. 9.
2021 journal article
CTD anatomy: Analyzing chemical-induced phenotypes and exposures from an anatomical perspective, with implications for environmental health studies
CURRENT RESEARCH IN TOXICOLOGY, 2, 128–139.
2021 journal article
Predicting molecular mechanisms, pathways, and health outcomes induced by Juul e-cigarette aerosol chemicals using the Comparative Toxicogenomics Database
CURRENT RESEARCH IN TOXICOLOGY, 2, 272–281.
2020 journal article
Comparative Toxicogenomics Database (CTD): update 2021
NUCLEIC ACIDS RESEARCH, 49(D1), D1138–D1143.
2020 journal article
Leveraging the Comparative Toxicogenomics Database to Fill in Knowledge Gaps for Environmental Health: A Test Case for Air Pollution-induced Cardiovascular Disease
TOXICOLOGICAL SCIENCES, 177(2), 392–404.
2018 journal article
Chemical-Induced Phenotypes at CTD Help Inform the Predisease State and Construct Adverse Outcome Pathways
TOXICOLOGICAL SCIENCES, 165(1), 145–156.
2018 journal article
The Comparative Toxicogenomics Database: update 2019
NUCLEIC ACIDS RESEARCH, 47(D1), D948–D954.
2016 journal article
BioCreative V CDR task corpus: a resource for chemical disease relation extraction
DATABASE-THE JOURNAL OF BIOLOGICAL DATABASES AND CURATION.
2016 journal article
Generating Gene Ontology-Disease Inferences to Explore Mechanisms of Human Disease at the Comparative Toxicogenomics Database
PLOS ONE, 11(5).
2016 journal article
The Comparative Toxicogenomics Database: update 2017
NUCLEIC ACIDS RESEARCH, 45(D1), D972–D978.
2014 journal article
The Comparative Toxicogenomics Database's 10th year anniversary: update 2015
NUCLEIC ACIDS RESEARCH, 43(D1), D914–D920.
2013 journal article
A CTD-Pfizer collaboration: manual curation of 88 000 scientific articles text mined for drug-disease and drug-phenotype interactions
DATABASE-THE JOURNAL OF BIOLOGICAL DATABASES AND CURATION.
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