Works (9)

Updated: July 5th, 2023 15:43

2021 journal article

Phenotypic effects of changes in the FTVTxK region of an Arabidopsis secondary wall cellulose synthase compared with results from analogous mutations in other isoforms

PLANT DIRECT, 5(8).

By: J. Burris n, M. Makarem*, E. Slabaugh n, A. Chaves*, E. Pierce n, J. Lee*, S. Kiemle*, A. Kwansa n ...

co-author countries: United States of America 🇺🇸
author keywords: AtCesA7; cellulose synthesis complex; genetic complementation; irx3-1 mutant; PpCesA5; protein engineering; sum frequency generation spectroscopy
Sources: Web Of Science, ORCID
Added: August 6, 2021

2019 journal article

Analysis of differential gene expression and alternative splicing is significantly influenced by choice of reference genome

RNA, 25(6), 669–684.

co-author countries: Germany 🇩🇪 Philippines 🇵🇭 United States of America 🇺🇸
author keywords: Oryza sativa; differential gene expression; splicing; reference genome; RNA-seq; transcriptome analysis
MeSH headings : Alternative Splicing; Base Sequence; Chromosome Mapping / methods; Gene Expression Profiling / standards; Genes, Essential; Genome, Plant; High-Throughput Nucleotide Sequencing; Oryza / classification; Oryza / genetics; Oryza / metabolism; Polymorphism, Single Nucleotide; RNA, Messenger / genetics; RNA, Messenger / metabolism; Reference Standards; Sequence Alignment; Transcriptome
Sources: Web Of Science, ORCID
Added: June 4, 2019

2018 journal article

Neural Net Classification Combined With Movement Analysis to Evaluate Setaria viridis as a Model System for Time of Day of Anther Appearance

FRONTIERS IN PLANT SCIENCE, 9.

By: J. Desai n, E. Slabaugh n, D. Liebelt n, J. Fredenberg n, B. Gray*, S. Jagadish*, O. Wilkins*, C. Doherty n

co-author countries: Canada 🇨🇦 United States of America 🇺🇸
author keywords: flower opening time; spikelet opening time; timing of anthesis; setaria; developmental stage; image analysis of plants; biological image classification
Sources: Web Of Science, ORCID
Added: November 12, 2018

2018 journal article

TGNap1 is required for microtubule-dependent homeostasis of a subpopulation of the plant trans-Golgi network

NATURE COMMUNICATIONS, 9.

By: L. Renna*, G. Stefano*, E. Slabaugh n, C. Wormsbaecher*, A. Sulpizio*, K. Zienkiewicz*, F. Brandizzi*

co-author countries: Germany 🇩🇪 United States of America 🇺🇸
MeSH headings : Adenosine Triphosphatases / metabolism; Arabidopsis / genetics; Arabidopsis / metabolism; Arabidopsis Proteins / metabolism; Carrier Proteins; Cell Membrane / metabolism; Endocytosis / physiology; Genes, Plant; Golgi Apparatus / metabolism; Homeostasis; Microtubules / metabolism; Protein Domains; Protein Interaction Domains and Motifs; Protein Transport; rab GTP-Binding Proteins / metabolism; trans-Golgi Network / genetics; trans-Golgi Network / metabolism
Source: Web Of Science
Added: December 31, 2018

2016 journal article

Comparative Structural and Computational Analysis Supports Eighteen Cellulose Synthases in the Plant Cellulose Synthesis Complex

Scientific Reports, 6(1).

By: B. Nixon*, K. Mansouri n, A. Singh n, J. Du*, J. Davis n, J. Lee n, E. Slabaugh n, V. Vandavasi* ...

co-author countries: United States of America 🇺🇸

Contributors: B. Nixon*, K. Mansouri n, A. Singh n, J. Du*, J. Davis n, J. Lee n, E. Slabaugh n, V. Vandavasi* ...

MeSH headings : Cellulose / biosynthesis; Cellulose / chemistry; Glucosyltransferases / chemistry; Models, Molecular; Plant Proteins / chemistry; Protein Domains; Protein Folding; Protein Structure, Quaternary
Sources: Web Of Science, ORCID, Crossref
Added: August 6, 2018

2016 journal article

Prediction of the structures of the plant-specific regions of vascular plant cellulose synthases and correlated functional analysis

Cellulose, 23(1), 145–161.

By: L. Sethaphong n, J. Davis n, E. Slabaugh n, A. Singh n, C. Haigler n & Y. Yingling n

co-author countries: United States of America 🇺🇸

Contributors: Y. Yingling n, C. Haigler n, A. Singh n, E. Slabaugh n, J. Davis n & L. Sethaphong n

author keywords: Arabidopsis thaliana; Cellulose synthesis; Computational protein structure prediction; Isoform specificity; Mutant complementation
Sources: Web Of Science, ORCID, Crossref
Added: August 6, 2018

2015 journal article

The valine and lysine residues in the conserved FxVTxK motif are important for the function of phylogenetically distant plant cellulose synthases

Glycobiology, 26(5), 509–519.

By: E. Slabaugh n, T. Scavuzzo-Duggan*, A. Chaves*, L. Wilson*, C. Wilson n, J. Davis n, D. Cosgrove*, C. Anderson*, A. Roberts*, C. Haigler n

co-author countries: United States of America 🇺🇸
author keywords: cellulose synthesis; gametophore formation; phenotypic complementation; root elongation; site-directed mutagenesis
MeSH headings : Amino Acid Motifs; Arabidopsis / enzymology; Arabidopsis / genetics; Arabidopsis Proteins / genetics; Arabidopsis Proteins / metabolism; Bryopsida / enzymology; Bryopsida / genetics; Glucosyltransferases / genetics; Glucosyltransferases / metabolism; Lysine / genetics; Lysine / metabolism; Valine / genetics; Valine / metabolism
Sources: Web Of Science, ORCID, Crossref
Added: August 6, 2018

2014 journal article

Cellulose synthases: new insights from crystallography and modeling

Trends in Plant Science, 19(2), 99–106.

By: E. Slabaugh n, J. Davis n, C. Haigler n, Y. Yingling n & J. Zimmer*

co-author countries: United States of America 🇺🇸

Contributors: J. Zimmer*, Y. Yingling n, C. Haigler n, J. Davis n & E. Slabaugh n

MeSH headings : Catalytic Domain; Crystallography; Glucosyltransferases / chemistry; Models, Molecular; Plant Proteins / chemistry
Sources: Web Of Science, ORCID, Crossref
Added: August 6, 2018

2014 journal article

Computational and genetic evidence that different structural conformations of a non-catalytic region affect the function of plant cellulose synthase

Journal of Experimental Botany, 65(22), 6645–6653.

co-author countries: United States of America 🇺🇸

Contributors: E. Slabaugh n, L. Sethaphong n, C. Xiao*, J. Amick n, C. Anderson*, C. Haigler n, Y. Yingling n

author keywords: Cellulose biosynthesis; CESA; genetic complementation; protein structural modelling; rsw1 mutant; transmembrane helix
MeSH headings : Amino Acid Sequence; Arabidopsis / enzymology; Arabidopsis / genetics; Arabidopsis Proteins / chemistry; Arabidopsis Proteins / genetics; Arabidopsis Proteins / metabolism; Biocatalysis; Computational Biology; Glucosyltransferases / chemistry; Glucosyltransferases / genetics; Glucosyltransferases / metabolism; Molecular Sequence Data; Mutant Proteins / metabolism; Mutation; Phenotype; Protein Structure, Secondary; Recombinant Fusion Proteins / metabolism; Sequence Alignment; Structure-Activity Relationship
Sources: Web Of Science, ORCID, Crossref
Added: August 6, 2018

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