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Works (13)
Updated: October 16th, 2023 14:46
2022 journal article
Enhancing HR Frequency for Precise Genome Editing in Plants
FRONTIERS IN PLANT SCIENCE, 13.
co-author countries:
China 🇨🇳 United States of America 🇺🇸
author keywords: homologous recombination; homology-directed repair; gene targeting; donor template; programmable nucleases
www.frontiersin.org (publisher PDF)
Sources: Web Of Science, ORCID
Added: May 31, 2022
2022 journal article
Identification of Transcription Factors Regulating SARS-CoV-2 Tropism Factor Expression by Inferring Cell-Type-Specific Transcriptional Regulatory Networks in Human Lungs
VIRUSES-BASEL, 14(4).
co-author countries:
China 🇨🇳 United States of America 🇺🇸
author keywords: SARS-CoV-2; single-cell RNA-seq; differential network analysis
MeSH headings : COVID-19; Gene Regulatory Networks; Humans; Lung / metabolism; SARS-CoV-2 / genetics; Transcription Factors / genetics; Viral Tropism / genetics
Sources: Web Of Science, ORCID
Added: May 2, 2022
2022 journal article
To Fight or to Grow: The Balancing Role of Ethylene in Plant Abiotic Stress Responses
PLANTS-BASEL, 11(1).
co-author countries:
United States of America 🇺🇸
author keywords: ethylene; abiotic stress; hormone crosstalk; growth and defense tradeoff
Sources: Web Of Science, ORCID
Added: December 24, 2021
2019 journal article
CAD1 and CCR2 protein complex formation in monolignol biosynthesis in Populus trichocarpa
NEW PHYTOLOGIST, 222(1), 244–260.
co-author countries:
China 🇨🇳 Taiwan, Province of China 🇹🇼 United States of America 🇺🇸
author keywords: co-immunoprecipitation; enzyme activity; monolignol biosynthetic pathway; nuclear magnetic resonance (NMR); Populus trichocarpa; stem-differentiating xylem protein
MeSH headings : Aldehyde Oxidoreductases / genetics; Aldehyde Oxidoreductases / metabolism; Down-Regulation / genetics; Gene Expression Regulation, Plant; Lignin / metabolism; Magnetic Resonance Spectroscopy; Plant Proteins / genetics; Plant Proteins / metabolism; Plants, Genetically Modified; Populus / genetics; Populus / metabolism; RNA Interference; Recombinant Proteins / metabolism; Xylem / metabolism
Sources: Web Of Science, ORCID
Added: December 17, 2018
2018 journal article
Improving wood properties for wood utilization through multi-omics integration in lignin biosynthesis
Nature Communications, 9(1), 1579.
co-author countries:
China 🇨🇳 Taiwan, Province of China 🇹🇼 United States of America 🇺🇸
Contributors: J. Wang* , M. Matthews n, C. Williams n , R. Shi n, C. Yang n, S. Tunlaya-Anukit n, n, Q. Li *
MeSH headings : Gene Expression Regulation, Plant; Lignin / biosynthesis; Lignin / genetics; Plants, Genetically Modified / genetics; Populus / genetics; Populus / metabolism; Transcriptome / genetics; Trees / genetics; Trees / metabolism; Wood / chemistry; Wood / physiology; Xylem / metabolism
Sources: Web Of Science, ORCID, Crossref
Added: August 6, 2018
2017 journal article
Reciprocal cross-regulation of VND and SND multigene TF families for wood formation in Populus trichocarpa
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 114(45), E9722–E9729.
co-author countries:
China 🇨🇳 Taiwan, Province of China 🇹🇼 United States of America 🇺🇸
Contributors: Y. Lin n, n, Q. Li *, W. Li n, J. Wang n , R. Shi n, S. Tunlaya-Anukit n, P. Shuai n
author keywords: reciprocal cross-regulation; NAC transcription factors; alternative splicing; wood formation; Populus trichocarpa
MeSH headings : Alternative Splicing; Cell Wall / genetics; Cell Wall / metabolism; Cloning, Molecular; DNA, Plant; Gene Expression Regulation, Plant / genetics; Gene Regulatory Networks; Genes, Plant; Homeostasis; Multigene Family; Nuclear Proteins; Plant Leaves / genetics; Plant Leaves / metabolism; Plant Proteins / genetics; Plant Proteins / metabolism; Plant Shoots / genetics; Plant Shoots / metabolism; Populus / genetics; Populus / metabolism; Recombinant Proteins / genetics; Transcription Factors / genetics; Transcription Factors / metabolism; Transcriptional Activation / genetics; Transcriptome; Wood / genetics; Wood / growth & development; Xylem / genetics; Xylem / growth & development
Sources: Web Of Science, ORCID
Added: August 6, 2018
2017 journal article
Tissue and cell-type co-expression networks of transcription factors and wood component genes in Populus trichocarpa
PLANTA, 245(5), 927–938.
co-author countries:
China 🇨🇳 Taiwan, Province of China 🇹🇼 United States of America 🇺🇸
author keywords: Wood formation; Transcriptome; Fiber cells; Vessel elements; Cell wall biosynthesis; Co-expression network
MeSH headings : Cell Wall / metabolism; Cellulose / metabolism; Cluster Analysis; Gene Expression Regulation, Plant; Lignin / metabolism; Molecular Sequence Annotation; Organ Specificity; Phloem / genetics; Phloem / growth & development; Plant Leaves / genetics; Plant Leaves / growth & development; Plant Proteins / genetics; Populus / genetics; Populus / growth & development; Sequence Analysis, RNA; Transcription Factors / genetics; Transcriptome; Wood / genetics; Wood / growth & development; Xylem / genetics; Xylem / growth & development
Sources: Web Of Science, ORCID
Added: August 6, 2018
2015 journal article
Expression analysis of genes encoding mitogen-activated protein kinases in maize provides a key link between abiotic stress signaling and plant reproduction
FUNCTIONAL & INTEGRATIVE GENOMICS, 15(1), 107–120.
co-author countries:
China 🇨🇳 United States of America 🇺🇸
author keywords: Maize; MAPK; Gene family; Gene expression; Abiotic stress; Plant reproduction
MeSH headings : Abscisic Acid / pharmacology; Amino Acid Motifs; Chromosomes, Plant / genetics; Cold Temperature; Conserved Sequence / genetics; Droughts; Exons / genetics; Gene Duplication; Gene Expression Profiling; Gene Expression Regulation, Enzymologic / drug effects; Gene Expression Regulation, Plant / drug effects; Genes, Plant; Introns / genetics; Mitogen-Activated Protein Kinases / chemistry; Mitogen-Activated Protein Kinases / genetics; Mitogen-Activated Protein Kinases / metabolism; Multigene Family; Organ Specificity / drug effects; Organ Specificity / genetics; Phylogeny; Plant Proteins / chemistry; Plant Proteins / genetics; Plant Proteins / metabolism; Promoter Regions, Genetic / genetics; Protein Structure, Tertiary; Reproduction / drug effects; Reproduction / genetics; Signal Transduction / genetics; Sodium Chloride / pharmacology; Stress, Physiological / drug effects; Stress, Physiological / genetics; Zea mays / drug effects; Zea mays / enzymology; Zea mays / genetics
Source: Web Of Science
Added: August 6, 2018
2015 journal article
Phosphorylation is an on/off switch for 5-hydroxyconiferaldehyde O-methyltransferase activity in poplar monolignol biosynthesis
Proceedings of the National Academy of Sciences, 112(27), 8481–8486.
co-author countries:
China 🇨🇳 United States of America 🇺🇸
Contributors: J. Wang n , L. Chuang n, P. Loziuk n, n, Y. Lin n, R. Shi n, G. Qu *, D. Muddiman n , R. Sederoff n, V. Chiang n
author keywords: AldOMT; COMT; lignin; phosphoproteomics; phosphoregulation
MeSH headings : Acrolein / analogs & derivatives; Acrolein / metabolism; Amino Acid Sequence; Binding Sites / genetics; Biocatalysis; Catechols / metabolism; Chromatography, Liquid; Electrophoresis, Polyacrylamide Gel; Green Fluorescent Proteins / genetics; Green Fluorescent Proteins / metabolism; Isoenzymes / genetics; Isoenzymes / metabolism; Lignin / biosynthesis; Methyltransferases / genetics; Methyltransferases / metabolism; Microscopy, Confocal; Molecular Sequence Data; Mutation; Phosphoproteins / metabolism; Phosphorylation; Plant Proteins / genetics; Plant Proteins / metabolism; Populus / enzymology; Populus / genetics; Populus / metabolism; Proteomics / methods; Protoplasts / enzymology; Protoplasts / metabolism; Sequence Homology, Amino Acid; Tandem Mass Spectrometry
Sources: Web Of Science, ORCID, Crossref
Added: August 6, 2018
2014 journal article
A robust chromatin immunoprecipitation protocol for studying transcription factor-DNA interactions and histone modifications in wood-forming tissue
NATURE PROTOCOLS, 9(9), 2180–2193.
co-author countries:
China 🇨🇳 United States of America 🇺🇸
MeSH headings : Base Sequence; Chromatin Immunoprecipitation / methods; DNA / metabolism; DNA Fragmentation; Histones / metabolism; Immunoprecipitation; Molecular Sequence Data; Populus / cytology; Populus / metabolism; Sequence Analysis, DNA; Transcription Factors / metabolism; Wood / cytology; Xylem / genetics; Xylem / metabolism
Source: Web Of Science
Added: August 6, 2018
2014 journal article
A simple improved-throughput xylem protoplast system for studying wood formation
NATURE PROTOCOLS, 9(9), 2194–2205.
co-author countries:
China 🇨🇳 Taiwan, Province of China 🇹🇼 United States of America 🇺🇸
MeSH headings : Cell Wall / metabolism; Gene Expression Regulation, Plant / genetics; Gene Regulatory Networks / genetics; Green Fluorescent Proteins; Populus / cytology; Populus / growth & development; Protoplasts / metabolism; Transfection / methods; Wood / cytology; Wood / growth & development; Xylem / chemistry
Sources: Web Of Science, ORCID
Added: August 6, 2018
2012 journal article
Splice variant of the SND1 transcription factor is a dominant negative of SND1 members and their regulation in Populus trichocarpa
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 109(36), 14699–14704.
co-author countries:
United States of America 🇺🇸
MeSH headings : Blotting, Western; Cloning, Molecular; DNA Primers / genetics; Dimerization; Electrophoresis, Polyacrylamide Gel; Gene Regulatory Networks / genetics; Homeostasis / physiology; Models, Biological; Plasmids / genetics; Populus / genetics; Protein Isoforms / genetics; Protein Transport; Real-Time Polymerase Chain Reaction; Transcription Factors / genetics
Source: Web Of Science
Added: August 6, 2018
journal article
Permeability reduction phenomena in packed beds, fiber mats, and wet webs of paper exposed to flow of liquids and suspensions: A review
Hubbe, M. A., Chen, H., & Heitmann, J. A. BioResources, 4(1), 405–451.
Source: NC State University Libraries
Added: August 6, 2018
