@inbook{chapter 19 - immunology_2020, DOI={10.1016/b978-0-12-812431-4.00019-1}, booktitle={The Zebrafish in Biomedical Research}, year={2020} } @article{phelps_fletcher_rodriguez-nunez_balik-meisner_tokarz_reif_germolec_yoder_2020, title={In vivo assessment of respiratory burst inhibition by xenobiotic exposure using larval zebrafish}, volume={17}, DOI={10.1080/1547691X.2020.1748772}, number={1}, journal={Journal of Immunotoxicology}, publisher={Informa UK Limited}, author={Phelps, Drake W. and Fletcher, Ashley A. and Rodriguez-Nunez, Ivan and Balik-Meisner, Michele R. and Tokarz, Debra A. and Reif, David M. and Germolec, Dori R. and Yoder, Jeffrey A.}, year={2020}, month={Jan}, pages={94–104} } @article{wcisel_howard_yoder_dornburg_2020, title={Transcriptome Ortholog Alignment Sequence Tools (TOAST) for phylogenomic dataset assembly}, volume={20}, DOI={10.1186/s12862-020-01603-w}, number={1}, journal={BMC Evolutionary Biology}, publisher={Springer Science and Business Media LLC}, author={Wcisel, Dustin J. and Howard, J. Thomas, III and Yoder, Jeffrey A. and Dornburg, Alex}, year={2020}, month={Dec} } @article{ganchingco_fukuyama_yoder_bäumer_2019, title={Calcium imaging of primary canine sensory neurons: Small‐diameter neurons responsive to pruritogens and algogens}, volume={9}, DOI={10.1002/brb3.1428}, journal={Brain and Behavior}, publisher={Wiley}, author={Ganchingco, Joy Rachel C. and Fukuyama, Tomoki and Yoder, Jeffrey A. and Bäumer, Wolfgang}, year={2019}, month={Dec} } @article{circulating tumor cells exit circulation while maintaining multicellularity, augmenting metastatic potential._2019, DOI={10.1242/jcs.231563}, journal={Journal of cell science}, year={2019}, month={Sep} } @article{stafford_kortum_castel_green_lau_early_muñana_mariani_yoder_olby_2019, title={Presence of cerebrospinal fluid antibodies associated with autoimmune encephalitis of humans in dogs with neurologic disease}, volume={33}, DOI={10.1111/jvim.15616}, number={5}, journal={Journal of Veterinary Internal Medicine}, publisher={Wiley}, author={Stafford, Emma G. and Kortum, Amanda and Castel, Aude and Green, Lauren and Lau, Jeanie and Early, Peter J. and Muñana, Karen R. and Mariani, Christopher L. and Yoder, Jeffrey A. and Olby, Natasha J.}, year={2019}, month={Sep}, pages={2175–2182} } @article{akuffo_alontaga_metcalf_beatty_becker_mcdaniel_hesterberg_goodheart_gunawan_ayaz_et al._2018, title={Ligand-mediated protein degradation reveals functional conservation among sequence variants of the CUL4-type E3 ligase substrate receptor cereblon}, volume={293}, ISSN={0021-9258 1083-351X}, url={http://dx.doi.org/10.1074/jbc.M117.816868}, DOI={10.1074/jbc.m117.816868}, number={16}, journal={Journal of Biological Chemistry}, publisher={American Society for Biochemistry & Molecular Biology (ASBMB)}, author={Akuffo, Afua A. and Alontaga, Aileen Y. and Metcalf, Rainer and Beatty, Matthew S. and Becker, Andreas and McDaniel, Jessica M. and Hesterberg, Rebecca S. and Goodheart, William E. and Gunawan, Steven and Ayaz, Muhammad and et al.}, year={2018}, month={Feb}, pages={6187–6200} } @article{ganchingco_yoder_baumer_2018, title={Use of a specific polyclonal anti-canine TSLP antibody reveals TSLP expression in normal tissue and cell culture}, volume={41}, journal={Journal of Veterinary Pharmacology and Therapeutics}, author={Ganchingco, J. R. C. and Yoder, J. A. and Baumer, W.}, year={2018}, pages={153–153} } @article{tokarz_heffelfinger_jima_gerlach_shah_rodriguez-nunez_kortum_fletcher_nordone_law_et al._2017, title={Disruption of Trim9 function abrogates macrophage motility in vivo}, volume={102}, ISSN={0741-5400 1938-3673}, url={http://dx.doi.org/10.1189/jlb.1A0816-371R}, DOI={10.1189/jlb.1a0816-371r}, number={6}, journal={Journal of Leukocyte Biology}, publisher={Wiley}, author={Tokarz, Debra A. and Heffelfinger, Amy K. and Jima, Dereje D. and Gerlach, Jamie and Shah, Radhika N. and Rodriguez-Nunez, Ivan and Kortum, Amanda N. and Fletcher, Ashley A. and Nordone, Shila K. and Law, J. McHugh and et al.}, year={2017}, month={Oct}, pages={1371–1380} } @article{sullivan_lage_yoder_postlethwait_kim_2017, title={Evolutionary divergence of the vertebrate TNFAIP8 gene family: Applying the spotted gar orthology bridge to understand ohnolog loss in teleosts}, volume={12}, ISSN={1932-6203}, url={http://dx.doi.org/10.1371/journal.pone.0179517}, DOI={10.1371/journal.pone.0179517}, number={6}, journal={PLOS ONE}, publisher={Public Library of Science (PLoS)}, author={Sullivan, Con and Lage, Christopher R. and Yoder, Jeffrey A. and Postlethwait, John H. and Kim, Carol H.}, editor={Boudinot, PierreEditor}, year={2017}, month={Jun}, pages={e0179517} } @article{chernyavskaya_mudbhary_zhang_tokarz_jacob_gopinath_sun_wang_magnani_madakashira_et al._2017, title={Loss of DNA methylation in zebrafish embryos activates retrotransposons to trigger antiviral signaling}, volume={144}, ISSN={0950-1991 1477-9129}, url={http://dx.doi.org/10.1242/dev.147629}, DOI={10.1242/dev.147629}, number={16}, journal={Development}, publisher={The Company of Biologists}, author={Chernyavskaya, Yelena and Mudbhary, Raksha and Zhang, Chi and Tokarz, Debra and Jacob, Vinitha and Gopinath, Smita and Sun, Xiaochen and Wang, Shuang and Magnani, Elena and Madakashira, Bhavani P. and et al.}, year={2017}, month={Jul}, pages={2925–2939} } @article{wcisel_ota_litman_yoder_2017, title={Spotted Gar and the Evolution of Innate Immune Receptors}, volume={328}, ISSN={1552-5007}, url={http://dx.doi.org/10.1002/jez.b.22738}, DOI={10.1002/jez.b.22738}, number={7}, journal={Journal of Experimental Zoology Part B: Molecular and Developmental Evolution}, publisher={Wiley}, author={Wcisel, Dustin J. and Ota, Tatsuya and Litman, Gary W. and Yoder, Jeffrey A.}, year={2017}, month={May}, pages={666–684} } @article{permana_grant_walker_yoder_2016, title={A Review of Automated Microinjection Systems for Single Cells in the Embryogenesis Stage}, volume={21}, DOI={10.1109/tmech.2016.2574871}, number={5}, journal={IEEE/ASME Transactions on Mechatronics}, publisher={Institute of Electrical and Electronics Engineers (IEEE)}, author={Permana, Sofie and Grant, Edward and Walker, Glenn M. and Yoder, Jeffrey A.}, year={2016}, month={Oct}, pages={2391–2404} } @article{mcconnell_hernandez_wcisel_kettleborough_stemple_yoder_andrade_de jong_2016, title={Alternative haplotypes of antigen processing genes in zebrafish diverged early in vertebrate evolution}, volume={113}, ISSN={0027-8424 1091-6490}, url={http://dx.doi.org/10.1073/pnas.1607602113}, DOI={10.1073/pnas.1607602113}, number={34}, journal={Proceedings of the National Academy of Sciences}, publisher={Proceedings of the National Academy of Sciences}, author={McConnell, Sean C. and Hernandez, Kyle M. and Wcisel, Dustin J. and Kettleborough, Ross N. and Stemple, Derek L. and Yoder, Jeffrey A. and Andrade, Jorge and de Jong, Jill L. O.}, year={2016}, month={Aug}, pages={E5014–E5023} } @article{allen_gracieux_talib_tokarz_hensley_cores_vandergriff_tang_de andrade_dinh_et al._2016, title={Angiopellosis as an Alternative Mechanism of Cell Extravasation}, volume={35}, ISSN={1066-5099}, url={http://dx.doi.org/10.1002/stem.2451}, DOI={10.1002/stem.2451}, number={1}, journal={STEM CELLS}, publisher={Wiley}, author={Allen, Tyler A. and Gracieux, David and Talib, Maliha and Tokarz, Debra A. and Hensley, M. Taylor and Cores, Jhon and Vandergriff, Adam and Tang, Junnan and de Andrade, James B.M. and Dinh, Phuong-Uyen and et al.}, year={2016}, month={Jul}, pages={170–180} } @article{braasch_gehrke_smith_kawasaki_manousaki_pasquier_amores_desvignes_batzel_catchen_et al._2016, title={Erratum: Corrigendum: The spotted gar genome illuminates vertebrate evolution and facilitates human-teleost comparisons}, volume={48}, ISSN={1061-4036 1546-1718}, url={http://dx.doi.org/10.1038/ng0616-700c}, DOI={10.1038/ng0616-700c}, number={6}, journal={Nature Genetics}, publisher={Springer Science and Business Media LLC}, author={Braasch, Ingo and Gehrke, Andrew R and Smith, Jeramiah J and Kawasaki, Kazuhiko and Manousaki, Tereza and Pasquier, Jeremy and Amores, Angel and Desvignes, Thomas and Batzel, Peter and Catchen, Julian and et al.}, year={2016}, month={May}, pages={700–700} } @article{tucker_mackenzie_maciag_dirscherl ackerman_swartz_yoder_hamilton_clay clark_2016, title={Phage display and structural studies reveal plasticity in substrate specificity of caspase-3a from zebrafish}, volume={25}, ISSN={0961-8368}, url={http://dx.doi.org/10.1002/pro.3032}, DOI={10.1002/pro.3032}, number={11}, journal={Protein Science}, publisher={Wiley}, author={Tucker, Matthew B. and MacKenzie, Sarah H. and Maciag, Joseph J. and Dirscherl Ackerman, Hayley and Swartz, Paul and Yoder, Jeffrey A. and Hamilton, Paul T. and Clay Clark, A.}, year={2016}, month={Sep}, pages={2076–2088} } @article{moore_garcia_lobbardi_jain_tang_moore_cortes_molodtsov_kasheta_luo_et al._2016, title={Single-cell transcriptional analysis of normal, aberrant, and malignant hematopoiesis in zebrafish}, volume={213}, DOI={10.1083/jcb.2133oia95}, number={3}, journal={The Journal of Cell Biology}, publisher={Rockefeller University Press}, author={Moore, Finola E. and Garcia, Elaine G. and Lobbardi, Riadh and Jain, Esha and Tang, Qin and Moore, John C. and Cortes, Mauricio and Molodtsov, Aleksey and Kasheta, Melissa and Luo, Christina C. and et al.}, year={2016}, month={May}, pages={2133OIA95} } @article{moore_garcia_lobbardi_jain_tang_moore_cortes_molodtsov_kasheta_luo_et al._2016, title={Single-cell transcriptional analysis of normal, aberrant, and malignant hematopoiesis in zebrafish}, volume={213}, ISSN={0022-1007 1540-9538}, url={http://dx.doi.org/10.1084/jem.20152013}, DOI={10.1084/jem.20152013}, abstractNote={Hematopoiesis culminates in the production of functionally heterogeneous blood cell types. In zebrafish, the lack of cell surface antibodies has compelled researchers to use fluorescent transgenic reporter lines to label specific blood cell fractions. However, these approaches are limited by the availability of transgenic lines and fluorescent protein combinations that can be distinguished. Here, we have transcriptionally profiled single hematopoietic cells from zebrafish to define erythroid, myeloid, B, and T cell lineages. We also used our approach to identify hematopoietic stem and progenitor cells and a novel NK-lysin 4+}, number={6}, journal={The Journal of Experimental Medicine}, publisher={Rockefeller University Press}, author={Moore, Finola E. and Garcia, Elaine G. and Lobbardi, Riadh and Jain, Esha and Tang, Qin and Moore, John C. and Cortes, Mauricio and Molodtsov, Aleksey and Kasheta, Melissa and Luo, Christina C. and et al.}, year={2016}, month={May}, pages={979–992} } @article{wcisel_yoder_2016, title={The confounding complexity of innate immune receptors within and between teleost species}, volume={53}, ISSN={1050-4648}, url={http://dx.doi.org/10.1016/j.fsi.2016.03.034}, DOI={10.1016/j.fsi.2016.03.034}, journal={Fish & Shellfish Immunology}, publisher={Elsevier BV}, author={Wcisel, Dustin J. and Yoder, Jeffrey A.}, year={2016}, month={Jun}, pages={24–34} } @article{rodriguez-nunez_wcisel_litman_litman_yoder_immunogenetics_2016, title={The identification of additional zebrafish DICP genes reveals haplotype variation and linkage to MHC class I genes}, volume={68}, ISSN={0093-7711 1432-1211}, url={http://dx.doi.org/10.1007/s00251-016-0901-6}, DOI={10.1007/s00251-016-0901-6}, number={4}, journal={Immunogenetics}, publisher={Springer Science and Business Media LLC}, author={Rodriguez-Nunez, I. and Wcisel, D.J. and Litman, R.T. and Litman, G.W. and Yoder, J.A. and Immunogenetics}, year={2016}, month={Jan}, pages={295–312} } @article{rodriguez-nunez_wcisel_litman_litman_yoder_immunogenetics_2016, title={The identification of additional zebrafish DICP genes reveals haplotype variation and linkage to MHC class I genes.}, author={Rodriguez-Nunez, I. and Wcisel, D.J. and Litman, R.T. and Litman, G.W. and Yoder, J.A. and Immunogenetics}, year={2016}, month={Jan} } @article{braasch_gehrke_smith_kawasaki_manousaki_pasquier_amores_desvignes_batzel_catchen_et al._2016, title={The spotted gar genome illuminates vertebrate evolution and facilitates human-teleost comparisons}, volume={48}, ISSN={1061-4036 1546-1718}, url={http://dx.doi.org/10.1038/ng.3526}, DOI={10.1038/ng.3526}, number={4}, journal={Nature Genetics}, publisher={Springer Science and Business Media LLC}, author={Braasch, Ingo and Gehrke, Andrew R and Smith, Jeramiah J and Kawasaki, Kazuhiko and Manousaki, Tereza and Pasquier, Jeremy and Amores, Angel and Desvignes, Thomas and Batzel, Peter and Catchen, Julian and et al.}, year={2016}, month={Mar}, pages={427–437} } @article{dirscherl_yoder_2015, title={A nonclassical MHC class I U lineage locus in zebrafish with a null haplotypic variant}, volume={67}, ISSN={0093-7711 1432-1211}, url={http://dx.doi.org/10.1007/s00251-015-0862-1}, DOI={10.1007/s00251-015-0862-1}, number={9}, journal={Immunogenetics}, publisher={Springer Science and Business Media LLC}, author={Dirscherl, Hayley and Yoder, Jeffrey A.}, year={2015}, month={Aug}, pages={501–513} } @article{schilling_nepomuceno_planchart_yoder_kelly_muddiman_daniels_hiramatsu_reading_2015, title={Machine learning reveals sex-specific 17β-estradiol-responsive expression patterns in white perch (Morone americana) plasma proteins}, volume={15}, ISSN={1615-9853}, url={http://dx.doi.org/10.1002/pmic.201400606}, DOI={10.1002/pmic.201400606}, number={15}, journal={PROTEOMICS}, publisher={Wiley}, author={Schilling, Justin and Nepomuceno, Angelito I. and Planchart, Antonio and Yoder, Jeffrey A. and Kelly, Robert M. and Muddiman, David C. and Daniels, Harry V. and Hiramatsu, Naoshi and Reading, Benjamin J.}, year={2015}, month={Jun}, pages={2678–2690} } @article{kortum_rodriguez-nunez_yang_shim_runft_o’driscoll_haire_cannon_turner_litman_et al._2014, title={Differential expression and ligand binding indicate alternative functions for zebrafish polymeric immunoglobulin receptor (pIgR) and a family of pIgR-like (PIGRL) proteins}, volume={66}, ISSN={0093-7711 1432-1211}, url={http://dx.doi.org/10.1007/s00251-014-0759-4}, DOI={10.1007/s00251-014-0759-4}, number={4}, journal={Immunogenetics}, publisher={Springer Science and Business Media LLC}, author={Kortum, Amanda N. and Rodriguez-Nunez, Ivan and Yang, Jibing and Shim, Juyoung and Runft, Donna and O’Driscoll, Marci L. and Haire, Robert N. and Cannon, John P. and Turner, Poem M. and Litman, Ronda T. and et al.}, year={2014}, month={Jan}, pages={267–279} } @article{rodríguez-nunez_wcisel_litman_yoder_2014, title={Multigene families of immunoglobulin domain-containing innate immune receptors in zebrafish: Deciphering the differences}, volume={46}, ISSN={0145-305X}, url={http://dx.doi.org/10.1016/j.dci.2014.02.004}, DOI={10.1016/j.dci.2014.02.004}, number={1}, journal={Developmental & Comparative Immunology}, publisher={Elsevier BV}, author={Rodríguez-Nunez, Iván and Wcisel, Dustin J. and Litman, Gary W. and Yoder, Jeffrey A.}, year={2014}, month={Sep}, pages={24–34} } @article{peterman_sullivan_goody_rodriguez-nunez_yoder_kim_2014, title={Neutralization of Mitochondrial Superoxide by Superoxide Dismutase 2 Promotes Bacterial Clearance and Regulates Phagocyte Numbers in Zebrafish}, volume={83}, ISSN={0019-9567 1098-5522}, url={http://dx.doi.org/10.1128/IAI.02245-14}, DOI={10.1128/iai.02245-14}, abstractNote={Mitochondria are known primarily as the location of the electron transport chain and energy production in cells. More recently, mitochondria have been shown to be signaling centers for apoptosis and inflammation. Reactive oxygen species (ROS) generated as by-products of the electron transport chain within mitochondria significantly impact cellular signaling pathways. Because of the toxic nature of ROS, mitochondria possess an antioxidant enzyme, superoxide dismutase 2 (SOD2), to neutralize ROS. If mitochondrial antioxidant enzymes are overwhelmed during severe infections, mitochondrial dysfunction can occur and lead to multiorgan failure or death.Pseudomonas aeruginosa}, number={1}, journal={Infection and Immunity}, publisher={American Society for Microbiology}, author={Peterman, E. M. and Sullivan, C. and Goody, M. F. and Rodriguez-Nunez, I. and Yoder, J. A. and Kim, C. H.}, editor={McCormick, B. A.Editor}, year={2014}, month={Nov}, pages={430–440} } @article{yoder_2014, title={Preface to the Special Issue: Zebrafish immunity and infection models}, volume={46}, ISSN={0145-305X}, url={http://dx.doi.org/10.1016/j.dci.2014.04.007}, DOI={10.1016/j.dci.2014.04.007}, number={1}, journal={Developmental & Comparative Immunology}, publisher={Elsevier BV}, author={Yoder, Jeffrey A.}, year={2014}, month={Sep}, pages={1–2} } @article{dirscherl_mcconnell_yoder_de jong_2014, title={The MHC class I genes of zebrafish}, volume={46}, ISSN={0145-305X}, url={http://dx.doi.org/10.1016/j.dci.2014.02.018}, DOI={10.1016/j.dci.2014.02.018}, number={1}, journal={Developmental & Comparative Immunology}, publisher={Elsevier BV}, author={Dirscherl, Hayley and McConnell, Sean C. and Yoder, Jeffrey A. and de Jong, Jill L.O.}, year={2014}, month={Sep}, pages={11–23} } @article{li_d’annibale-tolhurst_adler_fang_yin_birkenheuer_levy_jones_sung_hawkins_et al._2013, title={A Myristoylated Alanine-Rich C Kinase Substrate–Related Peptide Suppresses Cytokine mRNA and Protein Expression in LPS-Activated Canine Neutrophils}, volume={48}, ISSN={1044-1549 1535-4989}, url={http://dx.doi.org/10.1165/rcmb.2012-0278OC}, DOI={10.1165/rcmb.2012-0278oc}, number={3}, journal={American Journal of Respiratory Cell and Molecular Biology}, publisher={American Thoracic Society}, author={Li, Jingjing and D’Annibale-Tolhurst, Melissa A. and Adler, Kenneth B. and Fang, Shijing and Yin, Qui and Birkenheuer, Adam J. and Levy, Michael G. and Jones, Samuel L. and Sung, Eui Jae and Hawkins, Eleanor C. and et al.}, year={2013}, month={Mar}, pages={314–321} } @article{balhoff_miko_yoder_mullins_deans_2013, title={A semantic model for species description applied to the ensign wasps (Hymenoptera: Evaniidae) of New Caledonia}, volume={62}, DOI={10.1093/sysbio/syt028}, number={5}, journal={Systematic Biology}, author={Balhoff, J. P. and Miko, I. and Yoder, M. J. and Mullins, P. L. and Deans, A. R.}, year={2013}, pages={639–659} } @article{stebbing_irvin_rivera-serrano_boehme_ikizler_yoder_dermody_sherry_lyles_2013, title={An ITAM in a Nonenveloped Virus Regulates Activation of NF- B, Induction of Beta Interferon, and Viral Spread}, volume={88}, ISSN={0022-538X}, url={http://dx.doi.org/10.1128/JVI.02573-13}, DOI={10.1128/jvi.02573-13}, number={5}, journal={Journal of Virology}, publisher={American Society for Microbiology}, author={Stebbing, R. E. and Irvin, S. C. and Rivera-Serrano, E. E. and Boehme, K. W. and Ikizler, M. and Yoder, J. A. and Dermody, T. S. and Sherry, B. and Lyles, D. S.}, year={2013}, month={Dec}, pages={2572–2583} } @article{dirscherl_yoder_2013, title={Characterization of the Z lineage Major histocompatability complex class I genes in zebrafish}, volume={66}, ISSN={0093-7711 1432-1211}, url={http://dx.doi.org/10.1007/s00251-013-0748-z}, DOI={10.1007/s00251-013-0748-z}, number={3}, journal={Immunogenetics}, publisher={Springer Science and Business Media LLC}, author={Dirscherl, Hayley and Yoder, Jeffrey A.}, year={2013}, month={Nov}, pages={185–198} } @article{gabor_stevens_pietraszewski_gould_shim_yoder_lam_gong_hess_kim_et al._2013, title={Super Resolution Microscopy Reveals that Caveolin-1 Is Required for Spatial Organization of CRFB1 and Subsequent Antiviral Signaling in Zebrafish}, volume={8}, ISSN={1932-6203}, url={http://dx.doi.org/10.1371/journal.pone.0068759}, DOI={10.1371/journal.pone.0068759}, number={7}, journal={PLoS ONE}, publisher={Public Library of Science (PLoS)}, author={Gabor, Kristin A. and Stevens, Chad R. and Pietraszewski, Matthew J. and Gould, Travis J. and Shim, Juyoung and Yoder, Jeffrey and Lam, Siew Hong and Gong, Zhiyuan and Hess, Samuel T. and Kim, Carol H. and et al.}, editor={Lamaze, ChristopheEditor}, year={2013}, month={Jul}, pages={e68759} } @article{shah_rodriguez-nunez_eason_haire_bertrand_wittamer_traver_nordone_litman_yoder_et al._2012, title={Development and Characterization of Anti-Nitr9 Antibodies}, volume={2012}, ISSN={1687-9104 1687-9112}, url={http://dx.doi.org/10.1155/2012/596925}, DOI={10.1155/2012/596925}, abstractNote={The novel immune-type receptors (NITRs), which have been described in numerous bony fish species, are encoded by multigene families of inhibitory and activating receptors and are predicted to be functional orthologs to the mammalian natural killer cell receptors (NKRs). Within the zebrafish NITR family,nitr9}, journal={Advances in Hematology}, publisher={Hindawi Limited}, author={Shah, Radhika N. and Rodriguez-Nunez, Ivan and Eason, Donna D. and Haire, Robert N. and Bertrand, Julien Y. and Wittamer, Valērie and Traver, David and Nordone, Shila K. and Litman, Gary W. and Yoder, Jeffrey A. and et al.}, year={2012}, pages={1–9} } @article{haire_cannon_o&apos_driscoll_ostrov_mueller_turner_litman_litman_yoder_2012, title={Genomic and functional characterization of the diverse immunoglobulin domain-containing protein (DICP) family}, volume={99}, ISSN={0888-7543}, url={http://dx.doi.org/10.1016/j.ygeno.2012.02.004}, DOI={10.1016/j.ygeno.2012.02.004}, number={5}, journal={Genomics}, publisher={Elsevier BV}, author={Haire, R.N. and Cannon, J.P. and O&apos and Driscoll, M.L. and Ostrov, D.A. and Mueller, M.G. and Turner, P.M. and Litman, R.T. and Litman, G.W. and Yoder, J.A.}, year={2012}, month={May}, pages={282–291} } @inproceedings{nordone_li_d’annibale_birkenheuer_levy_yoder_jones_adler_2012, title={Myristoylated Alanine-Rich C Kinase Substrate (MARCKS) Protein Plays A Critical Role In Production Of Proinflammatory Cytokines By Isolated Canine Neutrophils}, DOI={10.1164/ajrccm-conference.2012.185.1_meetingabstracts.a2106}, booktitle={A67. ACUTE LUNG INJURY AND ACUTE RESPIRATORY DISTRESS SYNDROME: BIOLOGICAL MECHANISMS}, publisher={American Thoracic Society}, author={Nordone, Shila K. and Li, Jingjing and D’Annibale, Melissa A. and Birkenheuer, Adam J. and Levy, Michael G. and Yoder, Jeffrey A. and Jones, Sam L. and Adler, Kenneth B.}, year={2012}, month={May} } @article{jewett_yoder_ivanisevic_2012, title={Surface modifications on InAs decrease indium and arsenic leaching under physiological conditions}, volume={261}, DOI={10.1016/j.apsusc.2012.08.115}, journal={Applied Surface Science}, author={Jewett, S.A. and Yoder, Jeffrey and Ivanisevic, A.}, year={2012}, pages={842–850} } @article{morckel_lusic_farzana_yoder_deiters_nascone-yoder_2011, title={A photoactivatable small-molecule inhibitor for light-controlled spatiotemporal regulation of Rho kinase in live embryos}, volume={139}, ISSN={0950-1991 1477-9129}, url={http://dx.doi.org/10.1242/dev.072165}, DOI={10.1242/dev.072165}, number={2}, journal={Development}, publisher={The Company of Biologists}, author={Morckel, A. R. and Lusic, H. and Farzana, L. and Yoder, J. A. and Deiters, A. and Nascone-Yoder, N. M.}, year={2011}, month={Dec}, pages={437–442} } @article{li_birkenheuer_marr_levy_yoder_nordone_2011, title={Expression and function of triggering receptor expressed on myeloid cells-1 (TREM-1) on canine neutrophils}, volume={35}, ISSN={0145-305X}, url={http://dx.doi.org/10.1016/j.dci.2011.03.021}, DOI={10.1016/j.dci.2011.03.021}, number={8}, journal={Developmental & Comparative Immunology}, publisher={Elsevier BV}, author={Li, Jingjing and Birkenheuer, Adam J. and Marr, Henry S. and Levy, Michael G. and Yoder, Jeffrey A. and Nordone, Shila K.}, year={2011}, month={Aug}, pages={872–880} } @article{ott_mcdowell_turner_law_adler_yoder_jones_2011, title={Two Myristoylated Alanine-Rich C-Kinase Substrate (MARCKS) Paralogs are Required for Normal Development in Zebrafish}, volume={294}, ISSN={1932-8486}, url={http://dx.doi.org/10.1002/ar.21453}, DOI={10.1002/ar.21453}, number={9}, journal={The Anatomical Record: Advances in Integrative Anatomy and Evolutionary Biology}, publisher={Wiley}, author={Ott, Laura E. and Mcdowell, Zachary T. and Turner, Poem M. and Law, J. Mchugh and Adler, Kenneth B. and Yoder, Jeffrey A. and Jones, Samuel L.}, year={2011}, month={Aug}, pages={1511–1524} } @article{deiters_garner_lusic_govan_dush_nascone-yoder_yoder_2010, title={Photocaged Morpholino Oligomers for the Light-Regulation of Gene Function in Zebrafish and Xenopus Embryos}, volume={132}, ISSN={0002-7863 1520-5126}, url={http://dx.doi.org/10.1021/ja1053863}, DOI={10.1021/ja1053863}, number={44}, journal={Journal of the American Chemical Society}, publisher={American Chemical Society (ACS)}, author={Deiters, Alexander and Garner, R. Aaron and Lusic, Hrvoje and Govan, Jeane M. and Dush, Mike and Nascone-Yoder, Nanette M. and Yoder, Jeffrey A.}, year={2010}, month={Nov}, pages={15644–15650} } @article{phennicie_sullivan_singer_yoder_kim_2010, title={Specific Resistance to Pseudomonas aeruginosa Infection in Zebrafish Is Mediated by the Cystic Fibrosis Transmembrane Conductance Regulator}, volume={78}, ISSN={0019-9567}, url={http://dx.doi.org/10.1128/IAI.00302-10}, DOI={10.1128/iai.00302-10}, number={11}, journal={Infection and Immunity}, publisher={American Society for Microbiology}, author={Phennicie, R. T. and Sullivan, M. J. and Singer, J. T. and Yoder, J. A. and Kim, C. H.}, year={2010}, month={Aug}, pages={4542–4550} } @article{yoder_litman_2010, title={The phylogenetic origins of natural killer receptors and recognition: relationships, possibilities, and realities}, volume={63}, ISSN={0093-7711 1432-1211}, url={http://dx.doi.org/10.1007/s00251-010-0506-4}, DOI={10.1007/s00251-010-0506-4}, number={3}, journal={Immunogenetics}, publisher={Springer Science and Business Media LLC}, author={Yoder, Jeffrey A. and Litman, Gary W.}, year={2010}, month={Dec}, pages={123–141} } @article{hinton_hardman_kullman_law_schmale_walter_winn_yoder_2009, title={Aquatic animal models of human disease: Selected papers and recommendations from the 4th Conference}, volume={149}, ISSN={1532-0456}, url={http://dx.doi.org/10.1016/j.cbpc.2008.12.006}, DOI={10.1016/j.cbpc.2008.12.006}, number={2}, journal={Comparative Biochemistry and Physiology Part C: Toxicology & Pharmacology}, publisher={Elsevier BV}, author={Hinton, David E. and Hardman, Ron C. and Kullman, Seth W. and Law, Jerry M. and Schmale, Michael C. and Walter, Ronald B. and Winn, Richard N. and Yoder, Jeffrey A.}, year={2009}, month={Mar}, pages={121–128} } @article{yoder_turner_wright_wittamer_bertrand_traver_litman_2009, title={Developmental and tissue-specific expression of NITRs}, volume={62}, ISSN={0093-7711 1432-1211}, url={http://dx.doi.org/10.1007/s00251-009-0416-5}, DOI={10.1007/s00251-009-0416-5}, number={2}, journal={Immunogenetics}, publisher={Springer Nature}, author={Yoder, Jeffrey A. and Turner, Poem M. and Wright, Phillip D. and Wittamer, Valérie and Bertrand, Julien Y. and Traver, David and Litman, Gary W.}, year={2009}, month={Dec}, pages={117–122} } @article{jima_shah_orcutt_joshi_law_litman_trede_yoder_2009, title={Enhanced transcription of complement and coagulation genes in the absence of adaptive immunity}, volume={46}, ISSN={0161-5890}, url={http://dx.doi.org/10.1016/j.molimm.2008.12.021}, DOI={10.1016/j.molimm.2008.12.021}, number={7}, journal={Molecular Immunology}, publisher={Elsevier BV}, author={Jima, Dereje D. and Shah, Radhika N. and Orcutt, Timothy M. and Joshi, Deepa and Law, J. McHugh and Litman, Gary W. and Trede, Nikolaus S. and Yoder, Jeffrey A.}, year={2009}, month={Apr}, pages={1505–1516} } @article{yoder_2009, title={Form, function and phylogenetics of NITRs in bony fish}, volume={33}, ISSN={0145-305X}, url={http://dx.doi.org/10.1016/j.dci.2008.09.004}, DOI={10.1016/j.dci.2008.09.004}, number={2}, journal={Developmental & Comparative Immunology}, publisher={Elsevier BV}, author={Yoder, Jeffrey A.}, year={2009}, month={Feb}, pages={135–144} } @article{young_garner_yoder_deiters_2009, title={Light-activation of gene function in mammalian cells via ribozymes}, ISSN={1359-7345 1364-548X}, url={http://dx.doi.org/10.1039/b819375d}, DOI={10.1039/b819375d}, number={5}, journal={Chem. Commun.}, publisher={Royal Society of Chemistry (RSC)}, author={Young, Douglas D. and Garner, R. Aaron and Yoder, Jeffrey A. and Deiters, Alexander}, year={2009}, pages={568–570} } @article{xie_yin_nichols_yoder_horowitz_2009, title={Sp2 Is a Maternally Inherited Transcription Factor Required for Embryonic Development}, volume={285}, ISSN={0021-9258 1083-351X}, url={http://dx.doi.org/10.1074/jbc.M109.078881}, DOI={10.1074/jbc.M109.078881}, number={6}, journal={Journal of Biological Chemistry}, publisher={American Society for Biochemistry & Molecular Biology (ASBMB)}, author={Xie, Jianzhen and Yin, Haifeng and Nichols, Teresa D. and Yoder, Jeffrey A. and Horowitz, Jonathan M.}, year={2009}, month={Dec}, pages={4153–4164} } @article{chen_bai_sokol_zhou_ren_painter_liu_sallman_chen_yoder_et al._2008, title={A critical role for DAP10 and DAP12 in CD8+ T cell-mediated tissue damage in large granular lymphocyte leukemia}, volume={113}, ISSN={0006-4971 1528-0020}, url={http://dx.doi.org/10.1182/blood-2008-07-168245}, DOI={10.1182/blood-2008-07-168245}, number={14}, journal={Blood}, publisher={American Society of Hematology}, author={Chen, X. and Bai, F. and Sokol, L. and Zhou, J. and Ren, A. and Painter, J. S. and Liu, J. and Sallman, D. A. and Chen, Y. A. and Yoder, J. A. and et al.}, year={2008}, month={Dec}, pages={3226–3234} } @article{yoder_2008, title={Assessing infection and immunity in zebrafish}, volume={5}, DOI={10.1089/zeb.2008.0537}, number={3}, journal={Zebrafish}, author={Yoder, J.A.}, year={2008}, pages={189–191} } @article{epling-burnette_sokol_chen_bai_zhou_blaskovich_zou_painter_edwards_moscinski_et al._2008, title={Clinical improvement by farnesyltransferase inhibition in NK large granular lymphocyte leukemia associated with imbalanced NK receptor signaling}, volume={112}, ISSN={0006-4971 1528-0020}, url={http://dx.doi.org/10.1182/blood-2008-02-136382}, DOI={10.1182/blood-2008-02-136382}, number={12}, journal={Blood}, publisher={American Society of Hematology}, author={Epling-Burnette, P. K. and Sokol, L. and Chen, X. and Bai, F. and Zhou, J. and Blaskovich, M. A. and Zou, J. and Painter, J. S. and Edwards, T. D. and Moscinski, L. and et al.}, year={2008}, month={Dec}, pages={4694–4698} } @article{yoder_cannon_litman_murphy_freeman_litman_2008, title={Evidence for a transposition event in a second NITR gene cluster in zebrafish}, volume={60}, ISSN={0093-7711 1432-1211}, url={http://dx.doi.org/10.1007/s00251-008-0285-3}, DOI={10.1007/s00251-008-0285-3}, number={5}, journal={Immunogenetics}, publisher={Springer Science and Business Media LLC}, author={Yoder, Jeffrey A. and Cannon, John P. and Litman, Ronda T. and Murphy, Carly and Freeman, Jennifer L. and Litman, Gary W.}, year={2008}, month={Mar}, pages={257–265} } @article{young_lusic_lively_yoder_deiters_2008, title={Gene Silencing in Mammalian Cells with Light-Activated Antisense Agents}, volume={9}, ISSN={1439-4227 1439-7633}, url={http://dx.doi.org/10.1002/cbic.200800627}, DOI={10.1002/cbic.200800627}, number={18}, journal={ChemBioChem}, publisher={Wiley}, author={Young, Douglas D. and Lusic, Hrvoje and Lively, Mark O. and Yoder, Jeffrey A. and Deiters, Alexander}, year={2008}, month={Dec}, pages={2937–2940} } @article{desai_heffelfinger_orcutt_litman_yoder_2008, title={The medaka novel immune-type receptor (NITR) gene clusters reveal an extraordinary degree of divergence in variable domains}, volume={8}, ISSN={1471-2148}, url={http://dx.doi.org/10.1186/1471-2148-8-177}, DOI={10.1186/1471-2148-8-177}, number={1}, journal={BMC Evolutionary Biology}, publisher={Springer Nature}, author={Desai, Salil and Heffelfinger, Amy K and Orcutt, Timothy M and Litman, Gary W and Yoder, Jeffrey A}, year={2008}, pages={177} } @article{yoder_2008, title={Workshop report - assessing infection and immunity in zebrafish}, volume={5}, journal={Zebrafish}, author={Yoder, J. A.}, year={2008}, pages={189–191} } @article{litman_cannon_dishaw_haire_eason_yoder_prada_ostrov_2007, title={Immunoglobulin variable regions in molecules exhibiting characteristics of innate and adaptive immune receptors}, volume={38}, DOI={10.1007/s12026-007-0014-2}, number={1-3}, journal={Immunologic Research}, author={Litman, G.W. and Cannon, J.P. and Dishaw, L.J. and Haire, R.N. and Eason, D.D. and Yoder, Jeffrey and Prada, J.H. and Ostrov, D.A.}, year={2007}, pages={294–304} } @article{yoder_orcutt_traver_litman_2007, title={Structural characteristics of zebrafish orthologs of adaptor molecules that associate with transmembrane immune receptors}, volume={401}, ISSN={0378-1119}, url={http://dx.doi.org/10.1016/j.gene.2007.07.014}, DOI={10.1016/j.gene.2007.07.014}, number={1-2}, journal={Gene}, publisher={Elsevier BV}, author={Yoder, Jeffrey A. and Orcutt, Timothy M. and Traver, David and Litman, Gary W.}, year={2007}, month={Oct}, pages={154–164} } @article{wei_zhou_chen_shah_liu_orcutt_traver_djeu_litman_yoder_et al._2007, title={The zebrafish activating immune receptor Nitr9 signals via Dap12}, volume={59}, ISSN={0093-7711 1432-1211}, url={http://dx.doi.org/10.1007/s00251-007-0250-6}, DOI={10.1007/s00251-007-0250-6}, number={10}, journal={Immunogenetics}, publisher={Springer Science and Business Media LLC}, author={Wei, S. and Zhou, J.-M. and Chen, X. and Shah, R.N. and Liu, J. and Orcutt, T.M. and Traver, D. and Djeu, J.Y. and Litman, G.W. and Yoder, Jeffrey and et al.}, year={2007}, month={Sep}, pages={813–821} } @article{deiters_yoder_2006, title={Conditional Transgene and Gene Targeting Methodologies in Zebrafish}, volume={3}, ISSN={1545-8547 1557-8542}, url={http://dx.doi.org/10.1089/zeb.2006.3.415}, DOI={10.1089/zeb.2006.3.415}, number={4}, journal={Zebrafish}, publisher={Mary Ann Liebert Inc}, author={Deiters, Alexander and Yoder, Jeffrey A.}, year={2006}, month={Dec}, pages={415–429} } @article{panagos_dobrinski_chen_grant_traver_djeu_wei_yoder_2006, title={Immune-related, lectin-like receptors are differentially expressed in the myeloid and lymphoid lineages of zebrafish}, volume={58}, ISSN={0093-7711 1432-1211}, url={http://dx.doi.org/10.1007/s00251-005-0064-3}, DOI={10.1007/s00251-005-0064-3}, number={1}, journal={Immunogenetics}, publisher={Springer Science and Business Media LLC}, author={Panagos, Patoula G. and Dobrinski, Kimberly P. and Chen, Xianghong and Grant, Amanda W. and Traver, David and Djeu, Julie Y. and Wei, Sheng and Yoder, Jeffrey A.}, year={2006}, month={Feb}, pages={31–40} } @article{goll_kirpekar_maggert_yoder_hsieh_zhang_golic_jacobsen_bestor_2006, title={Methylation of tRNAAsp by the DNA Methyltransferase Homolog Dnmt2}, volume={311}, ISSN={0036-8075 1095-9203}, url={http://dx.doi.org/10.1126/science.1120976}, DOI={10.1126/science.1120976}, abstractNote={The sequence and the structure of DNA methyltransferase-2 (Dnmt2) bear close affinities to authentic DNA cytosine methyltransferases. A combined genetic and biochemical approach revealed that human DNMT2 did not methylate DNA but instead methylated a small RNA; mass spectrometry showed that this RNA is aspartic acid transfer RNA (tRNAAsp}, number={5759}, journal={Science}, publisher={American Association for the Advancement of Science (AAAS)}, author={Goll, Mary Grace and Kirpekar, Finn and Maggert, Keith A. and Yoder, Jeffrey A. and Hsieh, Chih-Lin and Zhang, Xiaoyu and Golic, Kent G. and Jacobsen, Steven E. and Bestor, Timothy H.}, year={2006}, month={Jan}, pages={395–398} } @article{lipscomb_schmitt_sablyak_yoder_nascone-yoder_2006, title={Role for retinoid signaling in left–right asymmetric digestive organ morphogenesis}, volume={235}, ISSN={1058-8388 1097-0177}, url={http://dx.doi.org/10.1002/dvdy.20879}, DOI={10.1002/dvdy.20879}, number={8}, journal={Developmental Dynamics}, publisher={Wiley}, author={Lipscomb, Kristen and Schmitt, Christopher and Sablyak, Amanda and Yoder, Jeffrey A. and Nascone-Yoder, Nanette}, year={2006}, pages={2266–2275} } @article{yoder_2004, title={Investigating the morphology, function and genetics of cytotoxic cells in bony fish}, volume={138}, ISSN={1532-0456}, url={http://dx.doi.org/10.1016/j.cca.2004.03.008}, DOI={10.1016/j.cca.2004.03.008}, number={3}, journal={Comparative Biochemistry and Physiology Part C: Toxicology & Pharmacology}, publisher={Elsevier BV}, author={Yoder, Jeffrey A.}, year={2004}, month={Jul}, pages={271–280} } @article{van den berg_yoder_litman_2004, title={On the origins of adaptive immunity: Innate immune receptors join the tale}, volume={25}, DOI={10.1016/j.it.2003.11.006}, number={1}, journal={Trends in Immunology}, author={Van Den Berg, T.K. and Yoder, J.A. and Litman, G.W.}, year={2004}, pages={11–16} } @article{berg_yoder_litman_2004, title={On the origins of adaptive immunity:possible clues from the SIRP and NITR multigene families}, volume={25}, journal={Trends in Immunology}, author={Berg, T. K. and Yoder, J. A. and Litman, G. W.}, year={2004}, pages={11–16} } @article{yoder_litman_mueller_desai_dobrinski_montgomery_buzzeo_ota_amemiya_trede_et al._2004, title={Resolution of the novel immune-type receptor gene cluster in zebrafish}, volume={101}, ISSN={0027-8424 1091-6490}, url={http://dx.doi.org/10.1073/pnas.0405242101}, DOI={10.1073/pnas.0405242101}, number={44}, journal={Proceedings of the National Academy of Sciences}, publisher={Proceedings of the National Academy of Sciences}, author={Yoder, J. A. and Litman, R. T. and Mueller, M. G. and Desai, S. and Dobrinski, K. P. and Montgomery, J. S. and Buzzeo, M. P. and Ota, T. and Amemiya, C. T. and Trede, N. S. and et al.}, year={2004}, month={Oct}, pages={15706–15711} } @article{litman_yoder_cannon_haire_2003, title={Novel Immune-type Receptor Genes and the Origins of Adaptive and Innate Immune Recognition}, volume={43}, ISSN={1540-7063 1557-7023}, url={http://dx.doi.org/10.1093/icb/43.2.331}, DOI={10.1093/icb/43.2.331}, number={2}, journal={Integrative and Comparative Biology}, publisher={Oxford University Press (OUP)}, author={Litman, G.W. and Yoder, J.A. and Cannon, J.P. and Haire, R.N.}, year={2003}, month={Apr}, pages={331–337} } @article{traver_herbomel_patton_murphey_yoder_litman_catic_amemiya_leonard_trede_et al._2003, title={The Zebrafish as a Model Organism to Study Development of the Immune System}, volume={81}, DOI={10.1016/s0065-2776(03)81007-6}, journal={Advances in Immunology}, publisher={Elsevier BV}, author={TRAVER, DAVID and HERBOMEL, PHILIPPE and PATTON, E.ELIZABETH and MURPHEY, RYAN D. and Yoder, Jeffrey and LITMAN, GARY W. and CATIC, ANDRÉ and AMEMIYA, CHRIS T. and LEONARD, I. ZON and TREDE, NIKOLAUS S. and et al.}, year={2003}, pages={254–330} } @article{yoder_hawke_eason_mueller_davids_gillin_litman_2002, title={BIVM, a Novel Gene Widely Distributed among Deuterostomes, Shares a Core Sequence with an Unusual Gene in Giardia lamblia}, volume={79}, ISSN={0888-7543}, url={http://dx.doi.org/10.1006/geno.2002.6768}, DOI={10.1006/geno.2002.6768}, number={6}, journal={Genomics}, publisher={Elsevier BV}, author={Yoder, Jeffrey A. and Hawke, Noel A. and Eason, Donna D. and Mueller, M.Gail and Davids, Barbara J. and Gillin, Frances D. and Litman, Gary W.}, year={2002}, month={Jun}, pages={750–755} } @article{yoder_mueller_nichols_ristow_thorgaard_ota_litman_2002, title={Cloning novel immune-type inhibitory receptors from the rainbow trout, Oncorhynchus mykiss}, volume={54}, ISSN={0093-7711 1432-1211}, url={http://dx.doi.org/10.1007/s00251-002-0511-3}, DOI={10.1007/s00251-002-0511-3}, number={9}, journal={Immunogenetics}, publisher={Springer Science and Business Media LLC}, author={Yoder, Jeffrey and Mueller, Gail and Nichols, Krista and Ristow, Sandra and Thorgaard, Gary and Ota, Tatsuya and Litman, Gary}, year={2002}, month={Dec}, pages={662–670} } @article{yoder_nielsen_amemiya_litman_2002, title={Zebrafish as an immunological model system}, volume={4}, DOI={10.1016/S1286-4579(02)00029-1}, number={14}, journal={Microbes and Infection}, publisher={Elsevier BV}, author={Yoder, Jeffrey A and Nielsen, Michael E and Amemiya, Chris T and Litman, Gary W}, year={2002}, month={Nov}, pages={1469–1478} } @article{mhanni_yoder_dubesky_mcgowan_2001, title={Cloning and sequence analysis of a zebrafish cDNA encoding DNA (cytosine-5)-methyltransferase-1}, volume={30}, DOI={10.1002/gene.1067}, number={4}, journal={Genesis}, author={Mhanni, A.A. and Yoder, Jeffrey and Dubesky, C. and McGowan, R.A.}, year={2001}, pages={213–219} } @article{yoder_litman_2001, title={Corrigendum to: “The zebrafish fth1, slc3a2, men1, pc, fgf3 and cycd1 genes define two regions of conserved synteny between linkage group 7 and human chromosome 11q13” [Gene 261 (2000) 235–242]}, volume={269}, DOI={10.1016/s0378-1119(01)00443-7}, number={1-2}, journal={Gene}, publisher={Elsevier BV}, author={Yoder, Jeffrey A and Litman, Gary W}, year={2001}, month={May}, pages={227} } @article{hawke_yoder_haire_mueller_litman_miracle_stuge_shen_miller_litman_et al._2001, title={Extraordinary variation in a diversified family of immune-type receptor genes}, volume={98}, ISSN={0027-8424 1091-6490}, url={http://dx.doi.org/10.1073/pnas.231418598}, DOI={10.1073/pnas.231418598}, number={24}, journal={Proceedings of the National Academy of Sciences}, publisher={Proceedings of the National Academy of Sciences}, author={Hawke, N.A. and Yoder, Jeffrey and Haire, R.N. and Mueller, M.G. and Litman, R.T. and Miracle, A.L. and Stuge, T. and Shen, L. and Miller, N. and Litman, G.W. and et al.}, year={2001}, month={Nov}, pages={13832–13837} } @article{yoder_mueller_wei_corliss_prather_willis_litman_djeu_litman_2001, title={Immune-type receptor genes in zebrafish share genetic and functional properties with genes encoded by the mammalian leukocyte receptor cluster}, volume={98}, ISSN={0027-8424 1091-6490}, url={http://dx.doi.org/10.1073/pnas.121101598}, DOI={10.1073/pnas.121101598}, number={12}, journal={Proceedings of the National Academy of Sciences}, publisher={Proceedings of the National Academy of Sciences}, author={Yoder, J. A. and Mueller, M. G. and Wei, S. and Corliss, B. C. and Prather, D. M. and Willis, T. and Litman, R. T. and Djeu, J. Y. and Litman, G. W.}, year={2001}, month={May}, pages={6771–6776} } @article{litman_hawke_yoder_2001, title={Novel immune-type receptor genes}, volume={181}, DOI={10.1034/j.1600-065X.2001.1810121.x}, number={1}, journal={Immunol Rev}, publisher={Wiley-Blackwell}, author={Litman, Gary W. and Hawke, Noel A. and Yoder, Jeffrey A.}, year={2001}, month={Jul}, pages={250–259} } @article{dong_yoder_zhang_zhou_bestor_cheng_2001, title={Structure of human DNMT2, an enigmatic DNA methyltransferase homolog that displays denaturant-resistant binding to DNA}, volume={29}, ISSN={1362-4962}, url={http://dx.doi.org/10.1093/nar/29.2.439}, DOI={10.1093/nar/29.2.439}, number={2}, journal={Nucleic Acids Research}, publisher={Oxford University Press (OUP)}, author={Dong, A. and Yoder, J.A. and Zhang, X. and Zhou, L. and Bestor, T.H. and Cheng, X.}, year={2001}, month={Jan}, pages={439–448} } @inbook{yoder_litman_2000, title={Immune-Type Diversity in the Absence of Somatic Rearrangement}, volume={248}, DOI={10.1007/978-3-642-59674-2_12}, booktitle={Current Topics in Microbiology and Immunology}, author={Yoder, Jeffrey and Litman, G. W.}, year={2000}, pages={271–282} } @article{yoder_litman_2000, title={The zebrafish fth1, slc3a2, men1, pc, fgf3 and cycd1 genes define two regions of conserved synteny between linkage group 7 and human chromosome 11q13}, volume={261}, DOI={10.1016/S0378-1119(00)00503-5}, number={2}, journal={Gene}, publisher={Elsevier BV}, author={Yoder, Jeffrey A and Litman, Gary W}, year={2000}, pages={235–242} } @article{yoder_haire_litman_1999, title={Cloning of two zebrafish cDNAs that share domains with the MHC class II-associated invariant chain}, volume={50}, DOI={10.1007/s002510050691}, number={1-2}, journal={Immunogenetics}, author={Yoder, Jeffrey and Haire, R.N. and Litman, G.W.}, year={1999}, pages={84–88} } @article{hawke_yoder_litman_1999, title={Expanding our understanding of immunoglobulin, T-cell antigen receptor, and novel immune-type receptor genes: A subset of the immunoglobulin gene superfamily}, volume={50}, DOI={10.1007/s002510050588}, number={3-4}, journal={Immunogenetics}, author={Hawke, N. A. and Yoder, Jeffrey and Litman, G. W.}, year={1999}, pages={124–133} } @article{yoder_bestor_1998, title={A candidate mammalian DNA methyltransferase related to pmt1p of fission yeast}, volume={7}, ISSN={1460-2083}, url={http://dx.doi.org/10.1093/hmg/7.2.279}, DOI={10.1093/hmg/7.2.279}, number={2}, journal={Human Molecular Genetics}, publisher={Oxford University Press (OUP)}, author={Yoder, J.A. and Bestor, T.H.}, year={1998}, month={Feb}, pages={279–284} } @article{mertineit_yoder_taketo_laird_trasler_bestor_1998, title={Sex-specific exons control DNA methyltransferase in mammalian germ cells}, volume={125}, number={5}, journal={Development}, author={Mertineit, C. and Yoder, J.A. and Taketo, T. and Laird, D.W. and Trasler, J.M. and Bestor, T.H.}, year={1998}, pages={889–897} } @article{yoder_walsh_bestor_1997, title={Cytosine methylation and the ecology of intragenomic parasites}, volume={13}, DOI={10.1016/S0168-9525(97)01181-5}, number={8}, journal={Trends in Genetics}, publisher={Elsevier BV}, author={Yoder, Jeffrey A. and Walsh, Colum P. and Bestor, Timothy H.}, year={1997}, month={Aug}, pages={335–340} } @article{yoder_soman_verdine_bestor_1997, title={DNA (cytosine-5)-methyltransferases in mouse cells and tissues. studies with a mechanism-based probe}, volume={270}, ISSN={0022-2836}, url={http://dx.doi.org/10.1006/jmbi.1997.1125}, DOI={10.1006/jmbi.1997.1125}, number={3}, journal={Journal of Molecular Biology}, publisher={Elsevier BV}, author={Yoder, Jeffrey A. and Soman, Neilesh S. and Verdine, Gregory L. and Bestor, Timothy H.}, year={1997}, month={Jul}, pages={385–395} } @article{yoder_bestor_1996, title={Genetic analysis of genomic methylation patterns in plants and mammals}, volume={377}, number={10}, journal={Biological Chemistry}, author={Yoder, J.A. and Bestor, T.H.}, year={1996}, pages={605–610} } @article{yoder_chiu yen_vertino_bestor_baylin_1996, title={New 5′ Regions of the Murine and Human Genes for DNA (Cytosine-5)-methyltransferase}, volume={271}, ISSN={0021-9258 1083-351X}, url={http://dx.doi.org/10.1074/jbc.271.49.31092}, DOI={10.1074/jbc.271.49.31092}, number={49}, journal={Journal of Biological Chemistry}, publisher={American Society for Biochemistry & Molecular Biology (ASBMB)}, author={Yoder, Jeffrey A. and Chiu Yen, Ray-Whay and Vertino, Paula M. and Bestor, Timothy H. and Baylin, Stephen B.}, year={1996}, month={Dec}, pages={31092–31097} } @article{mckinnon_weaver_yoder_fairbanks_wolf_1991, title={Cross-linking a maturation-dependent ram sperm plasma membrane antigen induces the acrosome reaction}, volume={29}, ISSN={1040-452X 1098-2795}, url={http://dx.doi.org/10.1002/mrd.1080290216}, DOI={10.1002/mrd.1080290216}, number={2}, journal={Molecular Reproduction and Development}, publisher={Wiley}, author={McKinnon, Christine A. and Weaver, Frances E. and Yoder, Jeffrey A. and Fairbanks, Grant and Wolf, David E.}, year={1991}, month={Jun}, pages={200–207} }