Joshua J. Beri

Works (5)

Updated: July 5th, 2023 15:39

2018 article

A novel integrated strategy for the detection and quantification of the neurotoxin β-N-methylamino-l-alanine in environmental samples

Beri, J., Kirkwood, K. I., Muddiman, D. C., & Bereman, M. S. (2018, February 17). Analytical and Bioanalytical Chemistry, Vol. 410, pp. 2597–2605.

By: J. Beri n, K. Kirkwood n, D. Muddiman n  & M. Bereman n

author keywords: BMAA; CZE; Isomer separation; Quantification; HRAM MS/MS; Seafood
MeSH headings : Amino Acids, Diamino / analysis; Animals; Cyanobacteria Toxins; Environmental Monitoring / methods; Environmental Pollutants / analysis; Fishes / metabolism; Food Analysis / methods; Humans; Limit of Detection; Neurotoxins / analysis; Seafood / analysis; Tandem Mass Spectrometry / methods
topics (OpenAlex): Amino Acid Enzymes and Metabolism; Metabolomics and Mass Spectrometry Studies; Polyamine Metabolism and Applications
TL;DR: Interestingly, BMAA was not identified in the free protein fraction but only detected after protein hydrolysis which suggests that BMAA is tightly bound by and/or incorporated into proteins. (via Semantic Scholar)
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14. Life Below Water (OpenAlex)
Sources: Web Of Science, NC State University Libraries
Added: August 6, 2018

2018 article

Machine Learning Reveals Protein Signatures in CSF and Plasma Fluids of Clinical Value for ALS

Bereman, M. S., Beri, J., Enders, J. R., & Nash, T. (2018, October 30). Scientific Reports, Vol. 8.

By: M. Bereman n, J. Beri n, J. Enders n  & T. Nash n

Contributors: M. Bereman n, J. Beri n, J. Enders n  & T. Nash n

MeSH headings : Amyotrophic Lateral Sclerosis / blood; Amyotrophic Lateral Sclerosis / cerebrospinal fluid; Amyotrophic Lateral Sclerosis / metabolism; Humans; Machine Learning; Multivariate Analysis; Proteomics
topics (OpenAlex): Amyotrophic Lateral Sclerosis Research; Studies on Chitinases and Chitosanases; Cystic Fibrosis Research Advances
TL;DR: The potential of a panel of targeted proteins for objective measurements of clinical value in ALS is demonstrated, and three proteins composed a prognostic model that explained 49% of the variation in the ALS-FRS scores. (via Semantic Scholar)
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10. Reduced Inequalities (OpenAlex)
Sources: Web Of Science, ORCID, NC State University Libraries
Added: November 19, 2018

2017 journal article

Exposure to BMAA mirrors molecular processes linked to neurodegenerative disease

Proteomics, 17(17-18).

By: J. Beri, T. Nash, R. Martin & M. Bereman

Source: NC State University Libraries
Added: August 6, 2018

2016 article

An Automated Pipeline to Monitor System Performance in Liquid Chromatography–Tandem Mass Spectrometry Proteomic Experiments

Bereman, M. S., Beri, J., Sharma, V., Nathe, C., Eckels, J., MacLean, B., & MacCoss, M. J. (2016, September 26). Journal of Proteome Research.

By: M. Bereman*, J. Beri*, V. Sharma *, C. Nathe, J. Eckels, B. MacLean *, M. MacCoss *

author keywords: system suitability; process control; proteomics; tandem mass spectrometry; control charts
MeSH headings : Automation; Chromatography, Liquid / methods; Chromatography, Liquid / standards; Information Dissemination; Internet; Proteomics / methods; Tandem Mass Spectrometry / methods; Tandem Mass Spectrometry / standards; Workflow
topics (OpenAlex): Advanced Proteomics Techniques and Applications; Mass Spectrometry Techniques and Applications; Advanced Biosensing Techniques and Applications
TL;DR: The development of a completely automated pipeline to monitor system suitability in bottom-up proteomic experiments, termed Panorama AutoQC, is reported, to evaluate LC-MS/MS performance in a range of scenarios including identification of suboptimal instrument performance, evaluation of ultrahigh pressure chromatography, and identification of the major sources of variation throughout years of peptide data collection. (via Semantic Scholar)
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Source: Web Of Science
Added: August 6, 2018

2015 article

Reagent for Evaluating Liquid Chromatography–Tandem Mass Spectrometry (LC-MS/MS) Performance in Bottom-Up Proteomic Experiments

Beri, J., Rosenblatt, M. M., Strauss, E., Urh, M., & Bereman, M. S. (2015, November 5). Analytical Chemistry.

By: J. Beri n, M. Rosenblatt*, E. Strauss*, M. Urh * & M. Bereman n

MeSH headings : Amino Acids / chemistry; Chromatography, Liquid / methods; HEK293 Cells; Humans; Hydrophobic and Hydrophilic Interactions; Indicators and Reagents / chemistry; Peptides / chemical synthesis; Peptides / chemistry; Proteomics / methods; Tandem Mass Spectrometry / methods
topics (OpenAlex): Advanced Proteomics Techniques and Applications; Mass Spectrometry Techniques and Applications; Metabolomics and Mass Spectrometry Studies
TL;DR: A novel proteomic standard for assessing liquid chromatography-tandem mass spectrometry (LC-MS/MS) instrument performance, in terms of chromatographic reproducibility and dynamic range within a single LC- MS/MS injection, is presented. (via Semantic Scholar)
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Source: Web Of Science
Added: August 6, 2018

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