Jeremy R. Ash

Ash, J. R., & Hughes-Oliver, J. M. (2022). Confidence bands and hypothesis tests for hit enrichment curves. JOURNAL OF CHEMINFORMATICS, 14(1). https://doi.org/10.1186/s13321-022-00629-0

Akhtari, F. S., Havener, T. M., Hertz, D. L., Ash, J., Larson, A., Carey, L. A., … Motsinger-Reif, A. A. (2021). Race and smoking status associated with paclitaxel drug response in patient-derived lymphoblastoid cell lines. PHARMACOGENETICS AND GENOMICS, 31(2), 48–52. https://doi.org/10.1097/FPC.0000000000000419

Odenkirk, M. T., Zin, P. P. K., Ash, J. R., Reif, D. M., Fourches, D., & Baker, E. S. (2020). Structural-based connectivity and omic phenotype evaluations (SCOPE): a cheminformatics toolbox for investigating lipidomic changes in complex systems. ANALYST, 145(22), 7197–7209. https://doi.org/10.1039/d0an01638a

Odenkirk, M. T., Stratton, K. G., Gritsenko, M. A., Bramer, L. M., Webb-Robertson, B.-J. M., Bloodsworth, K. J., … Baker, E. S. (2020). Unveiling molecular signatures of preeclampsia and gestational diabetes mellitus with multi-omics and innovative cheminformatics visualization tools. MOLECULAR OMICS, 16(6). https://doi.org/10.1039/d0mo00074d

Fourches, D., & Ash, J. (2019). [Review of 4D-quantitative structure-activity relationship modeling: making a comeback]. EXPERT OPINION ON DRUG DISCOVERY, 14(12), 1227–1235. https://doi.org/10.1080/17460441.2019.1664467

Ash, J. R., Kuenemann, M. A., Rotroff, D., Motsinger-Reif, A., & Fourches, D. (2019). Cheminformatics approach to exploring and modeling trait-associated metabolite profiles. JOURNAL OF CHEMINFORMATICS, 11. https://doi.org/10.1186/s13321-019-0366-3

Menden, M. P., Wang, D., Mason, M. J., Szalai, B., Bulusu, K. C., Guan, Y., … Zucknick, M. (2019). Community assessment to advance computational prediction of cancer drug combinations in a pharmacogenomic screen. NATURE COMMUNICATIONS, 10. https://doi.org/10.1038/s41467-019-09799-2

Burnum-Johnson, K. E., Zheng, X., Dodds, J. N., Ash, J., Fourches, D., Nicora, C. D., … Baker, E. S. (2019). [Review of Ion mobility spectrometry and the omics: Distinguishing isomers, molecular classes and contaminant ions in complex samples]. TRAC-TRENDS IN ANALYTICAL CHEMISTRY, 116, 292–299. https://doi.org/10.1016/j.trac.2019.04.022

Ash, J. R., & Hughes-Oliver, J. M. (2018). chemmodlab: a cheminformatics modeling laboratoryR package for fitting and assessing machine learning models. JOURNAL OF CHEMINFORMATICS, 10. https://doi.org/10.1186/s13321-018-0309-4

Ash, J., & Fourches, D. (2017). Characterizing the Chemical Space of ERK2 Kinase Inhibitors Using Descriptors Computed from Molecular Dynamics Trajectories. JOURNAL OF CHEMICAL INFORMATION AND MODELING, 57(6), 1286–1299. https://doi.org/10.1021/acs.jcim.7b00048

Huang, W., Zhou, G., Marchand, M., Ash, J. R., Morris, D., Van Dooren, P., … Wilgenbusch, J. C. (2016). TreeScaper: Visualizing and Extracting Phylogenetic Signal from Sets of Trees. MOLECULAR BIOLOGY AND EVOLUTION, 33(12), 3314–3316. https://doi.org/10.1093/molbev/msw196