Jing Xi

Works (4)

Updated: July 5th, 2023 15:40

2018 journal article

Acetosyringone treatment duration affects large T-DNA molecule transfer to rice callus

BMC BIOTECHNOLOGY, 18.

By: J. Xi n, M. Patel n, S. Dong*, Q. Que * & R. Qu n

author keywords: Agrobacterium; BIBAC; Immuno-precipitation; Large T-DNA; Monocot transformation
MeSH headings : Acetophenones / pharmacology; Agrobacterium tumefaciens / genetics; Chromosomes, Artificial, Bacterial / genetics; DNA, Bacterial / metabolism; Oryza / genetics; Plants, Genetically Modified / genetics; Transformation, Genetic / drug effects
TL;DR: It is demonstrated that extension of AS induction time highly significantly improved large-size T- DNA transfer to rice cells and provided valuable information of the T-strand dynamics and its impact on large T-DNA transfer in monocots, and likely dicots as well. (via Semantic Scholar)
UN Sustainable Development Goal Categories
15. Life on Land (Web of Science)
Source: Web Of Science
Added: October 19, 2018

2017 journal article

Distributions of topological tree metrics between a species tree and a gene tree

ANNALS OF THE INSTITUTE OF STATISTICAL MATHEMATICS, 69(3), 647–671.

By: J. Xi n, J. Xie* & R. Yoshida*

author keywords: Coalescent; Phylogenetics; Tree metrics; Tree topologies
TL;DR: This paper studies the distributions of the three tree distance metrics: the edge difference, the path difference, and the precise K interval cospeciation distance, between two trees. (via Semantic Scholar)
UN Sustainable Development Goal Categories
15. Life on Land (Web of Science)
Source: Web Of Science
Added: August 6, 2018

2017 article

Modeling the distribution of distance data in Euclidean space

ALGEBRAIC AND GEOMETRIC METHODS IN DISCRETE MATHEMATICS, Vol. 685, pp. 117–135.

By: R. Davidson, J. Rusinko, Z. Vernon & J. Xi*

TL;DR: This chapter model how input data points drawn from DNA sequences are distributed throughout Euclidean space in relation to the space of tree metrics, which can be described as a collection of polyhedral cones. (via Semantic Scholar)
UN Sustainable Development Goal Categories
15. Life on Land (Web of Science)
Source: Web Of Science
Added: August 6, 2018

2015 journal article

THE CHARACTERISTIC IMSET POLYTOPE OF BAYESIAN NETWORKS WITH ORDERED NODES

SIAM JOURNAL ON DISCRETE MATHEMATICS, 29(2), 697–715.

By: J. Xi* & R. Yoshida

author keywords: graphical model; characteristic imset polytope; diagnosis model; bipartite graph; directed acyclic graphs
TL;DR: This paper first considers cim-polytopes for all diagnosis models and shows that these polytopes are direct products of simplices, and gives a combinatorial description of all edges and all facets of these poly topes. (via Semantic Scholar)
Source: Web Of Science
Added: August 6, 2018

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