Kevin Volkel
College of Engineering
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Works (4)
Updated: April 13th, 2024 05:01
2023 journal article
FrameD: framework for DNA-based data storage design, verification, and validation
BIOINFORMATICS, 39(10).
Ed(s): J. Kelso
TL;DR:
FrameD fills a void in the tools publicly available to the DNA storage community by providing a modular and extensible framework with support for massive parallelism that will help accelerate the design process of future DNA-based storage systems.
(via Semantic Scholar)
academic.oup.com (publisher PDF)
UN Sustainable Development Goal Categories
9. Industry, Innovation and Infrastructure
(OpenAlex)
Sources: Web Of Science, ORCID, NC State University Libraries
Added: October 11, 2023
2022 journal article
DINOS: Data INspired Oligo Synthesis for DNA Data Storage
ACM JOURNAL ON EMERGING TECHNOLOGIES IN COMPUTING SYSTEMS, 18(3).
author keywords: DNA information storage; DNA synthesis; DNA assembly algorithms
TL;DR:
The approach offers greater density by up to 80% over a prior general purpose gene assembly technique, and in an analysis of synthesis costs, it is estimated that DINOS is as 105× cheaper than de novo synthesis.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
Sources: Web Of Science, ORCID, NC State University Libraries
Added: April 14, 2022
2021 journal article
Promiscuous molecules for smarter file operations in DNA-based data storage
NATURE COMMUNICATIONS, 12(1).
MeSH headings : Computer Simulation; DNA / chemistry; DNA Primers / chemistry; Databases, Nucleic Acid; High-Throughput Nucleotide Sequencing; Image Processing, Computer-Assisted / methods; Information Storage and Retrieval / methods; Real-Time Polymerase Chain Reaction / methods; Software; Temperature; Thermodynamics
TL;DR:
The authors leverage thermodynamics to control the access of different subsets of data in a file and provide an argument for the substantial and practical economic benefit of this generalizable strategy to organize data.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
Sources: Web Of Science, ORCID, NC State University Libraries
Added: July 12, 2021
2020 journal article
Dynamic and scalable DNA-based information storage
NATURE COMMUNICATIONS, 11(1).
MeSH headings : Algorithms; Bacteriophage T7 / genetics; DNA / genetics; DNA, Single-Stranded / genetics; Gene Expression Regulation, Viral; Genetic Code; Models, Genetic; Promoter Regions, Genetic / genetics; Transcription, Genetic
TL;DR:
It is shown that a simple architecture comprised of a T7 promoter and a single-stranded overhang domain (ss-dsDNA), can unlock dynamic DNA-based information storage with powerful capabilities and advantages.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
Sources: Web Of Science, ORCID, NC State University Libraries
Added: July 13, 2020
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