Mallory Choudoir

Sullivan, B., Kitzmiller, C. E., Tran, W. C., Choudoir, M., Simoes, R., Dayarathne, N., & DeAngelis, K. M. (2023, October 31). Complete genome sequence of <i>Bacillus thuringiensis</i> strain RC340, isolated from a temperate forest soil sample in New England (D. Rasko, Ed.). MICROBIOLOGY RESOURCE ANNOUNCEMENTS, Vol. 10. https://doi.org/10.1128/MRA.00607-23

Tran, W. C., Sullivan, B., Kitzmiller, C. E., Choudoir, M., Simoes, R., Dayarathne, N., & Deangelis, K. M. (2023). Draft genome sequence of <i>Paenibacillus</i> sp. strain RC67, an isolate from a long-term forest soil warming experiment in Petersham, Massachusetts. MICROBIOLOGY RESOURCE ANNOUNCEMENTS, 10. https://doi.org/10.1128/MRA.00373-23

Kitzmiller, C. E., Tran, W. C., Sullivan, B., Cortez, F., Choudoir, M., Simoes, R., … Deangelis, K. M. (2023). High-quality genomes of Paenibacillus spp. RC334 and RC343, isolated from a long-term forest soil warming experiment. MICROBIOLOGY RESOURCE ANNOUNCEMENTS, 8. https://doi.org/10.1128/MRA.00371-23

Choudoir, M. J., Narayanan, A., Rodriguez-Ramos, D., Simoes, R., Efroni, A., Sondrini, A., & DeAngelis, K. M. (2023, March 17). Pangenomes reveal genomic signatures of microbial adaptation to experimental soil warming. https://doi.org/10.1101/2023.03.16.532972

Choudoir, M. J., & DeAngelis, K. M. (2022). A framework for integrating microbial dispersal modes into soil ecosystem ecology. IScience, 25(3), 103887. https://doi.org/10.1016/j.isci.2022.103887

Schaal, H., Choudoir, M. J., Diwanji, V., Stoffolano, J., Jr., & DeAngelis, K. M. (2022, August 31). Chitosan diet alters the microbiome of adult house flies. https://doi.org/10.1101/2022.08.31.502951

Choudoir, M. J., & Eggleston, E. M. (2022). Reciprocal Inclusion of Microbiomes and Environmental Justice Contributes Solutions to Global Environmental Health Challenges. MSystems, 7(3). https://doi.org/10.1128/msystems.01462-21

Hariharan, J., Choudoir, M. J., Diebold, P., Panke-Buisse, K., & Buckley, D. H. (2022). Streptomyces apricus sp. nov., isolated from soil. International Journal of Systematic and Evolutionary Microbiology, 72(1). https://doi.org/10.1099/ijsem.0.005178

Choudoir, M. J., Järvenpää, M. J., Marttinen, P., & Buckley, D. H. (2021, January 11). A non-adaptive demographic mechanism for genome expansion in <i>Streptomyces</i> (Vol. 1). Vol. 1. https://doi.org/10.1101/2021.01.09.426074

Ishaq, S. L., Parada, F. J., Wolf, P. G., Bonilla, C. Y., Carney, M. A., Benezra, A., … Morar, N. (2021). Introducing the Microbes and Social Equity Working Group: Considering the Microbial Components of Social, Environmental, and Health Justice. MSystems, 6(4). https://doi.org/10.1128/msystems.00471-21

McBride, S. G., Choudoir, M., Fierer, N., & Strickland, M. S. (2020). Volatile organic compounds from leaf litter decomposition alter soil microbial communities and carbon dynamics. Ecology. https://doi.org/10.1002/ecy.3130

Choudoir, M., Rossabi, S., Gebert, M., Helmig, D., & Fierer, N. (2019). A Phylogenetic and Functional Perspective on Volatile Organic Compound Production by Actinobacteria. MSystems, 4(2). https://doi.org/10.1128/mSystems.00295-18

Choudoir, M., Pepe-Ranney, C., & Buckley, D. (2018). Diversification of Secondary Metabolite Biosynthetic Gene Clusters Coincides with Lineage Divergence in <em>Streptomyces</em>. Antibiotics, 7(1), 12. https://doi.org/10.3390/antibiotics7010012

Choudoir, M. J., & Buckley, D. H. (2018). Phylogenetic conservatism of thermal traits explains dispersal limitation and genomic differentiation of Streptomyces sister-taxa. The ISME Journal, 12(9), 2176–2186. https://doi.org/10.1038/s41396-018-0180-3

Choudoir, M. J., Barberan, A., Menninger, H. L., Dunn, R. R., & Fierer, N. (2018). Variation in range size and dispersal capabilities of microbial taxa. ECOLOGY, 99(2), 322–334. https://doi.org/10.1002/ecy.2094

Rossabi, S., Choudoir, M., Helmig, D., Hueber, J., & Fierer, N. (2018). Volatile Organic Compound Emissions From Soil Following Wetting Events. Journal of Geophysical Research: Biogeosciences. https://doi.org/10.1029/2018JG004514

Choudoir, M. J., Panke-Buisse, K., Andam, C. P., & Buckley, D. H. (2017). Genome Surfing As Driver of Microbial Genomic Diversity. Trends in Microbiology, 25(8), 624–636. https://doi.org/10.1016/j.tim.2017.02.006

Andam, C. P., Doroghazi, J. R., Campbell, A. N., Kelly, P. J., Choudoir, M. J., & Buckley, D. H. (2016). A Latitudinal Diversity Gradient in Terrestrial Bacteria of the Genus Streptomyces. MBio, 7(2), e02200–15.

Andam, C. P., Choudoir, M. J., Nguyen, A. V., Park, H. S., & Buckley, D. H. (2016). Contributions of ancestral inter-species recombination to the genetic diversity of extant Streptomyces lineages. The ISME Journal.

Choudoir, M. J., Doroghazi, B., JR, & D.H. (2016). Latitude delineates patterns of biogeography in terrestrial Streptomyces. Environmental Microbiology, 18, 4931–4945. https://doi.org/10.1111/1462-2920.13420

Choudoir, M. J., Campbell, A. N., & Buckley, D. H. (2012). Grappling with Proteus: population level approaches to understanding microbial diversity. Frontiers in Microbiology, 3, 336.

Raphael, B. H., Choudoir, M. J., Lúquez, C., Fernández, R., & Maslanka, S. E. (2010). Sequence diversity of genes encoding botulinum neurotoxin type F. Applied and Environmental Microbiology, 76(14), 4805–4812.

Kramer, L. C., Choudoir, M. J., Wielgus, S. M., Bhaskar, P. B., & Jiang, J. (2009). Correlation between transcript abundance of the RB gene and the level of the RB-mediated late blight resistance in potato. Molecular Plant-Microbe Interactions, 22(4), 447–455.