Mahmoud Moradi

Goolsby, C., Losey, J., Fakharzadeh, A., Xu, Y., Duker, M.-C., Sherman, M. G., … Moradi, M. (2023, June 28). Addressing the Embeddability Problem in Transition Rate Estimation. JOURNAL OF PHYSICAL CHEMISTRY A. https://doi.org/10.1021/acs.jpca.3c01367

Moradi, M., Sagui, C., & Roland, C. (2014, February 14). Investigating rare events with nonequilibrium work measurements. I. Nonequilibrium transition path probabilities (vol 140, 034114, 2014). JOURNAL OF CHEMICAL PHYSICS, Vol. 140. https://doi.org/10.1063/1.4865580

Moradi, M., Sagui, C., & Roland, C. (2014, February 14). Investigating rare events with nonequilibrium work measurements. II. Transition and reaction rates (vol 140, 034115, 2014). JOURNAL OF CHEMICAL PHYSICS, Vol. 140. https://doi.org/10.1063/1.4865582

Moradi, M., Babin, V., Roland, C., & Sagui, C. (2012). Are Long-Range Structural Correlations Behind the Aggregration Phenomena of Polyglutamine Diseases? PLOS COMPUTATIONAL BIOLOGY, 8(4). https://doi.org/10.1371/journal.pcbi.1002501

Moradi, M., Sagui, C., & Roland, C. (2011). Calculating relative transition rates with driven nonequilibrium simulations. CHEMICAL PHYSICS LETTERS, 518, 109–113. https://doi.org/10.1016/j.cplett.2011.10.054

Moradi, M., Babin, V., Roland, C., & Sagui, C. (2010). A classical molecular dynamics investigation of the free energy and structure of short polyproline conformers. JOURNAL OF CHEMICAL PHYSICS, 133(12). https://doi.org/10.1063/1.3481087

Moradi, M., Lee, J. G., Babin, V., Roland, C., & Sagui, C. (2010). Free energy and structure of polyproline peptides: An ab initio and classical molecular dynamics investigation. International Journal of Quantum Chemistry, 110(15), 2865–2879.

Babin, V., Karpusenka, V., Moradi, M., Roland, C., & Sagui, C. (2009, December). Adaptively Biased Molecular Dynamics: An Umbrella Sampling Method With a Time-Dependent Potential. INTERNATIONAL JOURNAL OF QUANTUM CHEMISTRY, Vol. 109, pp. 3666–3678. https://doi.org/10.1002/qua.22413

Moradi, M., Babin, V., Roland, C., Darden, T. A., & Sagui, C. (2009). Conformations and free energy landscapes of polyproline peptides. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 106(49), 20746–20751. https://doi.org/10.1073/pnas.0906500106