Shafeekh Muyyarikkandy Muyyarikkandy, M. S., Schlesinger, M., Ren, Y., Gao, M., Liefeld, A., Reed, S., & Amalaradjou, M. A. (2023). In ovo probiotic supplementation promotes muscle growth and development in broiler embryos. POULTRY SCIENCE, 102(7). https://doi.org/10.1016/j.psj.2023.102744 Muyyarikkandy, M. S., Mathew, E., Kuttappan, D., & Amalaradjou, M. A. (2023). Research Note: In ovo and in-feed probiotic supplementation improves layer embryo and pullet growth. POULTRY SCIENCE, 102(12). https://doi.org/10.1016/j.psj.2023.103092 Muyyarikkandy, M. S., Parzygnat, J., & Thakur, S. (2023). Uncovering changes in microbiome profiles across commercial and backyard poultry farming systems. MICROBIOLOGY SPECTRUM, 11(5). https://doi.org/10.1128/spectrum.01682-23 Vinithakumari, A. A., Padhi, P., Hernandez, B., Lin, S. J.-H., Dunkerson-Kurzhumov, A., Showman, L., … Mooyottu, S. (2022). Clostridioides difficile Infection Dysregulates Brain Dopamine Metabolism. Microbiology Spectrum, 10(2). https://doi.org/10.1128/spectrum.00073-22 Muyyarikkandy, M. S., Parzygnat, J., & Thakur, S. (2022, December 23). Uncovering Changes in Microbiome Profiles Across Commercial and Backyard Poultry Farming Systems. BioRxiv. https://doi.org/10.1101/2022.12.22.521647 Vinithakumari, A. A., Padhi, P., Hernandez, B., Lin, S. J.-H., Dunkerson-Kurzhumov, A., Showman, L., … Mooyottu, S. (2021). Clostridioides difficile infection increases circulating p-cresol levels and dysregulates brain dopamine metabolism: Linking gut-brain axis to autism spectrum disorders? BioRxiv. https://doi.org/10.1101/2021.10.22.465382 Kattapuram, N., Zhang, C., Muyyarikkandy, M. S., Surugihalli, C., Muralidaran, V., Gregory, T., & Sunny, N. E. (2021). Dietary Macronutrient Composition Differentially Modulates the Remodeling of Mitochondrial Oxidative Metabolism during NAFLD. Metabolites, 11(5). https://doi.org/10.3390/metabo11050272 Parzygnat, J. L., Muyyarikkandy, M. S., Fosnaught, M., Crespo, R., & Thakur, S. (2021, October 20). Investigation of the prevalence and antimicrobial resistance profiles of Salmonella and extended-spectrum betalactamase E. coli isolated from backyard broiler farms in the southeastern United States. Poster presented at the 2021 Fall Research Symposium: NIAMRRE Student Scientists Research Showcase. Kuttappan, D., Muyyarikkandy, M. S., Mathew, E., & Amalaradjou, M. A. (2021). Listeria monocytogenes Survival on Peaches and Nectarines under Conditions Simulating Commercial Stone-Fruit Packinghouse Operations. INTERNATIONAL JOURNAL OF ENVIRONMENTAL RESEARCH AND PUBLIC HEALTH, 18(17). https://doi.org/10.3390/ijerph18179174 Muyyarikkandy, M. S., McLeod, M., Maguire, M., Mahar, R., Kattapuram, N., Zhang, C., … Sunny, N. E. (2020). Branched chain amino acids and carbohydrate restriction exacerbate ketogenesis and hepatic mitochondrial oxidative dysfunction during NAFLD. FASEB Journal, 34(11), 14832–14849. https://doi.org/10.1096/fj.202001495R Kuttappan, D. A., Muyyarikkandy, M. S., & Amalaradjou, M. A. (2019). Dietary Supplementation of Cheese Modulates Inflammatory Response and Alleviates Colitis in Mice. Poster presented at the ASM Microbe, San Fransisco, CA. Kuttappan, D. A., Muyyarikkandy, M. S., & Amalaradjou, M. A. (2019, March 10). Effect Of Cheese Starter Cultures In The Management Of IBD. Presented at the 58th Annual Meeting and ToxExpo, Baltimore, MD. Surugihalli, C., Porter, T. E., Chan, A., Farley, L. S., Maguire, M., Zhang, C., … Sunny, N. E. (2019). Hepatic Mitochondrial Oxidative Metabolism and Lipogenesis Synergistically Adapt to Mediate Healthy Embryonic-to-Neonatal Transition in Chicken. SCIENTIFIC REPORTS, 9(1). https://doi.org/10.1038/s41598-019-56715-1 Muyyarikkandy, M. S., Maguire, M., Zhang, C., Kattapuram, N., Muralidaran, V., Surugihalli, C., & Sunny, N. E. (2019, June 19). Impact of Branched Chain Amino Acid Supplementation on Hepatic Mitochondrial Metabolism in Mice with Non-alcoholic Fatty Liver Disease. Poster presented at the 33rd Annual Symposium, Department of Animal and Avian Sciences, University of Maryland, College Park, MD. Muyyarikkandy, M., Maguire, M., Zhang, C., Kattapuram, N., Muralidaran, V., Surugihalli, C., & Sunny, N. (2019). Impact of Branched Chain Amino Acid Supplementation on Hepatic Mitochondrial Metabolism in Mice with Non-alcoholic Fatty Liver Disease (P08-136-19). Current Developments in Nutrition, 3(Supplement_1), nzz044.P08–136-19. https://doi.org/10.1093/cdn/nzz044.p08-136-19 Kuttappan, D. A., Muyyarikkandy, M. S., Fragomeni, B., & Amalaradjou, M. A. (2019, June). Impact of Dietary Supplementation of Cheese on Microbiome and Metabolome in Mice. Poster presented at the ASM Microbe, Chicago, IL. Zhang, C., Kattapuram, N., Muyyarikkandy, M. S., Maguire, M., Muralidaran, V., Surugihalli, C., & Sunny, N. E. (2019, May 17). The Effect of Branched-Chain Amino Acid Supplementation on Hepatic Lipid Metabolism. Poster presented at the 22nd Undergraduate Research Symposium, College Park, MD. Feng, L., Muyyarikkandy, M. S., Brown, S. R. B., & Amalaradjou, M. A. (2018). Attachment and Survival of Escherichia coli O157:H7 on In-Shell Hazelnuts. International Journal of Environmental Research and Public Health, 15(6). https://doi.org/10.3390/ijerph15061122 Feng, L., Muyyarikkandy, M. S., & Amalaradjou, M. A. (2018, July 15). Attachment and Survival of E.coli O157: H7 on in-shell hazelnuts. Presented at the IFT18 Annual Meeting & Expo, Chicago, IL. Mathew, E. N., Muyyarikkandy, M. S., Kuttappan, D., & Amalaradjou, M. A. (2018). Attachment of Salmonella enterica on mangoes and survival under conditions simulating commercial mango packing house and importer facility. Frontiers in Microbiology, 9(JUL). https://doi.org/10.3389/fmicb.2018.01519 Muyyarikkandy, M. S., Alqahtani, F. H., Mandoiu, I., & Amalaradjou, M. A. (2018). Draft genome sequence of Lactobacillus paracasei DUP 13076, which exhibits potent antipathogenic effects against Salmonella enterica serovars Enteritidis, Typhimurium, and Heidelberg. Genome Announcements, 6(7). https://doi.org/10.1128/genomeA.00065-18 Muyyarikkandy, M. S., Alqahtani, F. H., Mandoiu, I., & Amalaradjou, M. A. (2018). Draft genome sequence of Lactobacillus rhamnosus NRRL B-442, a potential probiotic strain. Genome Announcements, 6(7). https://doi.org/10.1128/genomeA.00046-18 Muyyarikkandy, M. S., Darre, M. J., & Amalaradjou, M. A. (2018). Early (in-ovo) administration of probiotics to promote growth in broiler chicken (Grant Report No. GNE16- 128). Retrieved from http://projects.sare.org/sare_project/GNE16-128 Muyyarikkandy, M. S., Mathew, E. N., Kuttappan, D., Darre, M., & Amalaradjou, M. A. (2018, April 2). Effect of early (in-ovo) and in-feed supplementation of probiotics on growth and development in broilers. Presented at the Our farms, our future, the next 30 years of sustainable agriculture, St. Louis, MO. Mathew, E. N., Muyyarikkandy, M. S., Bedell, C., & Amalaradjou, M. A. (2018). Efficacy of Chlorine, Chlorine Dioxide, and Peroxyacetic Acid in Reducing Salmonella Contamination in Wash Water and on Mangoes Under Simulated Mango Packinghouse Washing Operations. Frontiers in Sustainable Food Systems, 2. https://doi.org/10.3389/fsufs.2018.00018 Muyyarikkandy, M. S., Mathew, E. N., Schlesinger, M., Kuttappan, D., Darre, M., & Amalaradjou, M. A. (2018, July 23). In-ovo and in-feed probiotic supplementation promotes overall growth and muscle development in broiler chicken. Presented at the 2018 PSA Annual Meeting, San Antonio, TX. Vinayamohan, P., Pellissery, A. J., Surendran Nair, M., Muyyarikkandy, M. S., & Venkitanarayanan, K. (2018, July 23). Inhibiting Horizontal Gene Transfer of Antibiotic Resistance between MDR Salmonella Heidelberg and E. coli by Phytochemicals. Poster presented at the 2018 PSA Annual Meeting, San Antonio, TX. Vinayamohan, P., Pellissery, A. J., Surendran Nair, M., Muyyarikkandy, M. S., & Venkitanarayanan, K. (2018, June 7). Inhibiting Horizontal Gene Transfer of Antibiotic Resistance between MDR Salmonella Typhimurium and E. coli by Phytochemicals. Poster presented at the ASM Microbe 2018, Atlanta, GA. Narayanan, A., Nair, M. S., Muyyarikkandy, M. S., & Amalaradjou, M. A. (2018). Inhibition and Inactivation of Uropathogenic Escherichia coli Biofilms on Urinary Catheters by Sodium Selenite. International Journal of Molecular Sciences, 19(6). https://doi.org/10.3390/ijms19061703 Kuttappan, D., Muyyarikkandy, M. S., & Amalaradjou, M. A. (2018, July 15). Listeria monocytogenes persistence on peaches and nectarines under commercial stone fruit processing conditions. Poster presented at the IFT18 Annual Meeting & Expo, Chicago, IL. Muyyarikkandy, M. S., & Amalaradjou, M. A. (2018, July 11). Protective Cultures Inhibit Salmonella Enteritidis Colonization and Dissemination In Vitro. Presented at the IFT18 Annual Meeting & Expo, Chicago, IL. Schlesinger, M., Muyyarikkandy, M. S., & Amalaradjou, M. A. (2018, April 13). Temporal Changes in Muscle Development in the Chicken Embryo as Influenced by Probiotic Supplementation. Poster presented at the 21st Annual Frontiers, Storrs, CT. Mathew, E. N., Muyyarikkandy, M. S., & Amalaradjou, M. A. (2017, July 9). Efficacy of Wash Water Disinfectants in Reducing Water-to-Mango Contamination by Salmonella under Simulated Mango Packing House Operations. Presented at the IAFP 2017, Tampa, FL. Muyyarikkandy, M. S., & Amalaradjou, M. A. (2017). Lactobacillus bulgaricus, lactobacillus rhamnosus and lactobacillus paracasei attenuate salmonella enteritidis, salmonella heidelberg and salmonella typhimurium colonization and virulence gene expression in vitro. International Journal of Molecular Sciences, 18(11). https://doi.org/10.3390/ijms18112381 Narayanan, A., Muyyarikkandy, M. S., Mooyottu, S., Venkitanarayanan, K., & Amalaradjou, M. A. R. (2017). Oral supplementation of trans-cinnamaldehyde reduces uropathogenic Escherichia coli colonization in a mouse model. Letters in Applied Microbiology, 64(3), 192–197. https://doi.org/10.1111/lam.12713 Narayanan, A., Nair, M. S., Muyyarikkandy, M. S., Amalaradjou, M. A. R., & Venkitanarayanan, K. (2016, June 16). Antibiofilm effect of Selenium on Uropathogenic Escherichia coli. Poster presented at the ASM annual meeting & ASM Microbe 2016, Boston, MA. Upadhyaya, I., Fancher, S., Yin, H., Nair, M. S., Chen, C., Karumathil, D., … Venkitanarayanan, K. (2016, July 24). Reducing Salmonella Heidelberg colonization in 21-day-old broiler chicks by in-feed supplementation of β-resorcylic acid and trans-cinnamaldehyde. Poster presented at the 2016 PSA Annual Meeting, Cleveland, OH. Narayanan, A., Muyyarikkandy, M. S., Mooyottu, S., Venkitanarayanan, K., & Amalaradjou, M. A. (2015, April 11). Oral Supplementation of Trans-Cinnamaldehyde Reduces Uropathogenic Escherichia coli colonization in a Mouse Model. Poster presented at the 18th Annual Frontiers, Storrs, CT. Muyyarikkandy, M. S., & Amalaradjou, M. A. (2015, March 5). Probiotics Inhibit Salmonella Enteritidis, S. Heidelberg and S. Typhimurium DT104 Survival and Colonization In Vitro. Poster presented at the CAHNR graduate research forum, Storrs, CT. Bhaskar, N., Ravishankar, C., Muyyarikkandy, M. S., Kanjirakkuzhiyil, S., & John, K. (2014). Invasive pulmonary aspergillosis in Captive pigeons (Columba livia). Poster presented at the 26th Kerala Science Congress, Kerala, India. Muyyarikkandy, M. S., Ravishankar, C., Panikkaparambil, S., Kanjirakkuzhiyil, S., Bhaskar, N., & John, K. (2014). Isolation of Pasteurella multocida subsp. Multocida from a fatal case of pasteurellosisin muscovy ducks (cairinamoschata). Poster presented at the 26th Kerala Science Congress, Kerala, India. Kanjirakkuzhiyil, S., Ravishankar, C., Muyyarikkandy, M. S., Bhaskar, N., & John, K. (2014). Isolation of Streptococcus canis from a closed wound of a dog. Presented at the 26th Kerala Science Congress, Kerala, India. Kanjirakkuzhiyil, S., Ravishankar, C., Muyyarikkandy, M. S., Bhaskar, N., & John, K. (2013). Systemic Candidiasis in Pigeon: Isolation and Identification of The Yeast. Poster presented at the 25th Kerala Science Congress, Kerala,India. Theradiyil, S. A., & Muyyarikkandy, M. S. (2011). Bulbar Conjunctival Pedicle Grafting for The Management of Penetrating Corneal Injury and Staphylomaina Cow. Poster presented at the International Symposium on "Clinical Skill development For Next Generation Veterinary Practice" and Third National Clinical Case Conference in Farm and Companion Animal Practice, Tamil Nadu, India.