2024 article
A Framework for Quality Control in Quantitative Proteomics
Tsantilas, K. A., Merrihew, G. E., Robbins, J. E., Johnson, R. S., Park, J., Plubell, D. L., … MacCoss, M. J. (2024, September 9). JOURNAL OF PROTEOME RESEARCH.
2022 journal article
An experimental evaluation of the efficacy of perinatal sulforaphane supplementation to decrease the incidence and severity of vinclozolin-induced hypospadias in the mouse model
TOXICOLOGY AND APPLIED PHARMACOLOGY, 451.
2022 article
The Cyanotoxin 2,4-DAB Reduces Viability and Causes Behavioral and Molecular Dysfunctions Associated with Neurodegeneration in Larval Zebrafish
Martin, R. M., Bereman, M. S., & Marsden, K. C. (2022, January 14). NEUROTOXICITY RESEARCH, Vol. 40.
2021 review
ALSUntangled #60: light therapy
[Review of ]. AMYOTROPHIC LATERAL SCLEROSIS AND FRONTOTEMPORAL DEGENERATION, 23(3-4), 315–319.
2021 journal article
ALSUntangled 59: Tamoxifen THE ALSUNTANGLED GROUP
AMYOTROPHIC LATERAL SCLEROSIS AND FRONTOTEMPORAL DEGENERATION, 22(7-8), 595–598.
2021 journal article
Toxicant exposure during pregnancy increases protective proteins in the dam and a sexually dimorphic response in the fetus
TOXICOLOGY AND APPLIED PHARMACOLOGY, 413.
2020 journal article
BMAA and MCLR Interact to Modulate Behavior and Exacerbate Molecular Changes Related to Neurodegeneration in Larval Zebrafish
TOXICOLOGICAL SCIENCES, 179(2), 251–261.
2020 journal article
Metabolite Profiling Reveals Predictive Biomarkers and the Absence of beta-Methyl Amino-L-alanine in Plasma from Individuals Diagnosed with Amyotrophic Lateral Sclerosis
JOURNAL OF PROTEOME RESEARCH, 19(8), 3276–3285.
2020 journal article
Peptide variability and signatures associated with disease progression in CSF collected longitudinally from ALS patients
ANALYTICAL AND BIOANALYTICAL CHEMISTRY, 412(22), 5465–5475.
2019 review
Maternal vitamin D deficiency and developmental origins of health and disease (DOHaD)
[Review of ]. JOURNAL OF ENDOCRINOLOGY, 241(2), R65–R80.
2019 journal article
Mixture designs to investigate adverse effects upon co-exposure to environmental cyanotoxins
Toxicology, 421, 74–83.
2018 journal article
A novel integrated strategy for the detection and quantification of the neurotoxin beta-N-methylamino-l-alanine in environmental samples
ANALYTICAL AND BIOANALYTICAL CHEMISTRY, 410(10), 2597–2605.
2018 journal article
Leveraging proteomics to compare submerged versus air-liquid interface carbon nanotube exposure to a 3D lung cell model
TOXICOLOGY IN VITRO, 54, 58–66.
2018 journal article
Machine Learning Reveals Protein Signatures in CSF and Plasma Fluids of Clinical Value for ALS
SCIENTIFIC REPORTS, 8(1).
2017 journal article
Acetylation-induced TDP-43 pathology is suppressed by an HSF1-dependent chaperone program
Nature Communications, 8(1).
2017 journal article
Development of selected reaction monitoring methods to systematically quantify kinase abundance and phosphorylation stoichiometry in human samples
Kinase Signaling Networks, 1636, 353–369.
2017 journal article
Exposure to BMAA mirrors molecular processes linked to neurodegenerative disease
PROTEOMICS, 17(17-18), 1700161.
2017 journal article
MSstatsQC: Longitudinal System Suitability Monitoring and Quality Control for Targeted Proteomic Experiments
MOLECULAR & CELLULAR PROTEOMICS, 16(7), 1335–1347.
2017 journal article
Mapping differential cellular protein response of mouse alveolar epithelial cells to multi-walled carbon nanotubes as a function of atomic layer deposition coating
NANOTOXICOLOGY, 11(3), 313–326.
2016 journal article
An Automated Pipeline to Monitor System Performance in Liquid Chromatography-Tandem Mass Spectrometry Proteomic Experiments
JOURNAL OF PROTEOME RESEARCH, 15(12), 4763–4769.
2016 journal article
Improving the analytical performance and versatility of paper spray mass spectrometry via paper microfluidics
ANALYST, 141(13), 4065–4073.
2016 journal article
Nuclear Localized LSR: A Novel Regulator of Breast Cancer Behavior and Tumorigenesis
MOLECULAR CANCER RESEARCH, 15(2), 165–178.
2015 journal article
Data-independent-acquisition mass spectrometry for identification of targeted-peptide site-specific modifications
ANALYTICAL AND BIOANALYTICAL CHEMISTRY, 407(22), 6627–6635.
2015 journal article
Reagent for Evaluating Liquid Chromatography-Tandem Mass Spectrometry (LC-MS/MS) Performance in Bottom-Up Proteomic Experiments
ANALYTICAL CHEMISTRY, 87(23), 11635–11640.
2015 journal article
Toxicoproteomic analysis of pulmonary carbon nanotube exposure using LC-MS/MS
TOXICOLOGY, 329, 80–87.
Contributors: G. Hilton n, A. Taylor n, C. McClure n, G. Parsons n , J. Bonner n & n
2014 journal article
C/EBPα regulates CRL4Cdt2-mediated degradation of p21 in response to UVB-induced DNA damage to control the G1/S checkpoint
Cell Cycle, 13(22), 3602–3610.
2014 journal article
Evidence of the Biochemical Basis of Host Virulence in the Greenbug Aphid,Schizaphis graminum(Homoptera: Aphididae)
Journal of Proteome Research, 13(4), 2094–2108.
2014 journal article
Implementation of Statistical Process Control for Proteomic Experiments Via LC MS/MS
JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY, 25(4), 581–587.
2014 review
Tools for monitoring system suitability in LC MS/MS centric proteomic experiments
[Review of ]. PROTEOMICS, 15(5-6), 891–902.
2013 journal article
Development and Characterization of a Novel Plug and Play Liquid Chromatography-Mass Spectrometry (LC-MS) Source That Automates Connections between the Capillary Trap, Column, and Emitter
Molecular & Cellular Proteomics, 12(6), 1701–1708.
2012 journal article
A method to determine the kinetics of multiple proteins in human infants with respiratory distress syndrome
Analytical and Bioanalytical Chemistry, 403(8), 2397–2402.
2012 journal article
De Novo Correction of Mass Measurement Error in Low Resolution Tandem MS Spectra for Shotgun Proteomics
Journal of The American Society for Mass Spectrometry, 23(12), 2075–2082.
2012 journal article
Effects of Column and Gradient Lengths on Peak Capacity and Peptide Identification in Nanoflow LC-MS/MS of Complex Proteomic Samples
Journal of The American Society for Mass Spectrometry, 24(1), 148–153.
2012 journal article
Homopteran Vector Biomarkers for Efficient Circulative Plant Virus Transmission are Conserved in Multiple Aphid Species and the Whitefly Bemisia tabaci
Journal of Integrative Agriculture, 11(2), 249–262.
2012 journal article
Learning Score Function Parameters for Improved Spectrum Identification in Tandem Mass Spectrometry Experiments
Journal of Proteome Research, 11(9), 4499–4508.
2012 journal article
Platform-independent and Label-free Quantitation of Proteomic Data Using MS1 Extracted Ion Chromatograms in Skyline
Molecular & Cellular Proteomics, 11(5), 202–214.
2012 journal article
The development of selected reaction monitoring methods for targeted proteomics via empirical refinement
PROTEOMICS, 12(8), 1134–1141.
2011 journal article
Comparison between procedures using SDS for shotgun proteomic analyses of complex samples
PROTEOMICS, 11(14), 2931–2935.
2011 journal article
Evaluation of Front-End Higher Energy Collision-Induced Dissociation on a Benchtop Dual-Pressure Linear Ion Trap Mass Spectrometer for Shotgun Proteomics
Analytical Chemistry, 84(3), 1533–1539.
2011 journal article
Garrod's fourth inborn error of metabolism solved by the identification of mutations causing pentosuria
Proceedings of the National Academy of Sciences, 108(45), 18313–18317.
2010 journal article
One-year plasma N-linked glycome intra-individual and inter-individual variability in the chicken model of spontaneous ovarian adenocarcinoma
INTERNATIONAL JOURNAL OF MASS SPECTROMETRY, 305(2-3), 79–86.
2010 journal article
The effects of abundant plasma protein depletion on global glycan profiling using NanoLC FT-ICR mass spectrometry
ANALYTICAL AND BIOANALYTICAL CHEMISTRY, 396(4), 1473–1479.
2009 journal article
Development of a Robust and High Throughput Method for Profiling N-Linked Glycans Derived from Plasma Glycoproteins by NanoLC-FTICR Mass Spectrometry
JOURNAL OF PROTEOME RESEARCH, 8(7), 3764–3770.
2009 journal article
Increasing the hydrophobicity and electrospray response of glycans through derivatization with novel cationic hydrazides
CHEMICAL COMMUNICATIONS, 46(2), 237–239.
2008 journal article
Development of a nanoLC LTQ Orbitrap Mass Spectrometric Method for Profiling Glycans Derived from Plasma from Healthy, Benign Tumor Control, and Epithelial Ovarian Cancer Patients
ANALYTICAL CHEMISTRY, 81(3), 1130–1136.
Contributors: T. Williams n & D. Muddiman n n,
2008 journal article
Mass measurement accuracy comparisons between a double-focusing magnetic sector and a time-of-flight mass analyzer
RAPID COMMUNICATIONS IN MASS SPECTROMETRY, 22(10), 1563–1566.
2007 journal article
Carbohydrate analysis by desorption electrospray ionization Fourier transform ion cyclotron resonance mass spectrometry
ANALYTICAL CHEMISTRY, 79(22), 8812–8815.
Contributors: T. Williams n & D. Muddiman n n,
2007 journal article
Detection of attomole amounts of analyte by desorption electrospray ionization mass spectrometry (DESI-MS) determined using fluorescence spectroscopy
JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY, 18(6), 1093–1096.
2007 journal article
Remote mass spectrometric sampling of electrospray- and desorption electrospra-generated ions using an air ejector
Journal of the American Society for Mass Spectrometry, 18(10), 1844–1847.
2007 journal article
Remote mass spectrometric sampling of electrospray- and desorption electrospray-generated ions using an air ejector
Journal of the American Society for Mass Spectrometry, 18(10), 1844–1847.
2006 journal article
Direct high-resolution peptide and protein analysis by desorption electrospray ionization Fourier transform ion cyclotron resonance mass spectrometry
Rapid Communications in Mass Spectrometry, 20(22), 3409–3411.
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