Ruian Ke

Autocrine and paracrine interferon signalling as 'ring vaccination' and 'contact tracing' strategies to suppress virus infection in a host

Principles of Effective and Robust Innate Immune Response to Viral Infections: A Multiplex Network Analysis

FRONTIERS IN IMMUNOLOGY, 10.

Within-host infectious disease models accommodating cellular coinfection, with an application to influenza

VIRUS EVOLUTION, 5(2).

Determinants of the efficacy of HIV latency-reversing agents and implications for drug and treatment design

JCI INSIGHT, 3(20).

Network analysis of virus-innate immune interaction within a host

2018 52nd Annual Conference on Information Sciences and Systems (CISS).

Variation in cell-associated unspliced HIV RNA on antiretroviral therapy is associated with the circadian regulator brain-and-muscle-ARNT-like-1

AIDS, 32(15), 2119–2128.

NS5A inhibitors unmask differences in functional replicase complex half-life between different hepatitis C virus strains

PLOS PATHOGENS, 13(6).

On the Death Rate of Abortively Infected Cells: Estimation from Simian-Human Immunodeficiency Virus Infection

JOURNAL OF VIROLOGY, 91(18).

Transcriptional Reprogramming during Effector-to-Memory Transition Renders CD4(+) T Cells Permissive for Latent HIV-1 Infection

IMMUNITY, 47(4), 766-+.

Modeling the Effects of Vorinostat In Vivo Reveals both Transient and Delayed HIV Transcriptional Activation and Minimal Killing of Latently Infected Cells

PLOS PATHOGENS, 11(10).