Reid Wilson Longley

A cost and community perspective on the barriers to microbiome data reuse

Kelliher, J. M., Johnson, L. Y. D., Rodriguez, F. E., Saunders, J. K., Kroeger, M. E., Hanson, B., … Eloe-Fadrosh, E. A. (2025, April 9). Frontiers in Bioinformatics.

Investigating Bacterial-Fungal Interactions using Fungal Highway Columns in Diverse Environments and Substrates

Kelliher, J. M., Johnson, L. Y. D., Robinson, A. J., Palmieri, I., Hanson, B. T., Longley, R., … Junier, P. (2025, January 24). Journal of Visualized Experiments.

Pangeneric analyses reveal the divergent genome evolution and ecologies between morels and truffles in the Morchellaceae

Bonito, G., Miyauchi, S., Hayes, R. D., Tan, H., Kuo, A., Robinson, A., … Martin, F. M. (2025, August 5). Current Biology, Vol. 35.

Quantifying the impact of workshops promoting microbiome data standards and data stewardship

Kelliher, J. M., Rodriguez, F. E., Johnson, L. Y. D., Roux, S., Smith, M., Clum, A., … Eloe-Fadrosh, E. A. (2025, March 22). Scientific Reports.

Recovering new viruses from New Mexico soils

Feeser, K., Longley, R., Gallegos-Graves, L. V., Albright, M., & Shakya, M. (2025, October 16). (S. Roux, Ed.). Microbiology Resource Announcements.

Erratum for Longley et al., “Signatures of Mollicutes-related endobacteria in publicly available Mucoromycota genomes”

Longley, R., Robinson, A. J., Asher, O. A., Middlebrook, E., Bonito, G., & Chain, P. S. G. (2024, November 18). Erratum for Longley et al., “Signatures of Mollicutes-related endobacteria in publicly available Mucoromycota genomes.” MSphere.

Fabricated devices for performing bacterial-fungal interaction experiments across scales

Kelliher, J. M., Johnson, L. Y. D., Robinson, A. J., Longley, R., Hanson, B. T., Cailleau, G., … Chain, P. S. G. (2024, August 7). Frontiers in Microbiology.

Signatures of Mollicutes-related endobacteria in publicly available Mucoromycota genomes

Longley, R., Robinson, A. J., Asher, O. A., Middlebrook, E., Bonito, G., & Chain, P. S. G. (2024, August 27). (G. Butler, Ed.). MSphere.

A centralized resource for bacterial–fungal interactions research

Robinson, A., Babinski, M., Xu, Y., Kelliher, J., Longley, R., & Chain, P. (2023, April 10). Fungal Biology.

Comparative genomics of Mollicutes-related endobacteria supports a late invasion into Mucoromycota fungi

Longley, R., Robinson, A., Liber, J. A., Bryson, A. E., Morales, D. P., LaButti, K., … Bonito, G. (2023, September 18). Communications Biology.

Species-specific coral microbiome assemblages support host bleaching resistance during an extreme marine heatwave

Longley, R., Benucci, G. M. N., Pochon, X., Bonito, G., & Bonito, V. (2023, October 12). The Science of The Total Environment.

The endohyphal microbiome: current progress and challenges for scaling down integrative multi-omic microbiome research

Kelliher, J. M., Robinson, A. J., Longley, R., Johnson, L. Y. D., Hanson, B. T., Morales, D. P., … Chain, P. S. G. (2023, August 26). Microbiome, Vol. 11.

Using high-throughput sequencing to investigate summer truffle consumption by chipmunks in relation to retention forestry

Sultaire, S. M., Benucci, G. M. N., Longley, R., Kroll, A. J., Verschuyl, J., Bonito, G., & Roloff, G. J. (2023, October 2). Forest Ecology and Management.

Maple and hickory leaf litter fungal communities reflect pre-senescent leaf communities

Liber, J. A., Minier, D. H., Stouffer-Hopkins, A., Wyk, J. V., Longley, R., & Bonito, G. (2022, January 27). PeerJ, Vol. 10, p. e12701.

Non-target impacts of fungicide disturbance on phyllosphere yeasts in conventional and no-till management

Noel, Z. A., Longley, R., Benucci, G. M. N., Trail, F., Chilvers, M. I., & Bonito, G. (2022, February 23). ISME Communications, Vol. 2.

The Blueberry Fruit Mycobiome Varies by Tissue Type and Fungicide Treatment

Szymanski, S., Longley, R., Hatlen, R. J., Heger, L., Sharma, N., Bonito, G., & Miles, T. D. (2022, November 15). Phytobiomes Journal, Vol. 2.

A Two-Step PCR Protocol Enabling Flexible Primer Choice and High Sequencing Yield for Illumina MiSeq Meta-Barcoding

Chen, K.-H., Longley, R., Bonito, G., & Liao, H.-L. (2021, June 23). Agronomy, Vol. 11, p. 1274.

Cellular Innovation of the Cyanobacterial Heterocyst by the Adaptive Loss of Plasticity

Miller, S. R., Longley, R., Hutchins, P. R., & Bauersachs, T. (2020, January 1). Current Biology, Vol. 30, pp. 344–350.e4.

Crop Management Impacts the Soybean (Glycine max) Microbiome

Longley, R., Noel, Z. A., Benucci, G. M. N., Chilvers, M. I., Trail, F., & Bonito, G. (2020, June 3). Frontiers in Microbiology, Vol. 11.

Fungal and bacterial community dynamics in substrates during the cultivation of morels (Morchella rufobrunnea) indoors

Longley, R., Benucci, G. M. N., Mills, G., & Bonito, G. (2019, September 1). FEMS Microbiology Letters, Vol. 366.

Identification of Fungal Communities Within the Tar Spot Complex of Corn in Michigan via Next-Generation Sequencing

McCoy, A. G., Roth, M. G., Shay, R., Noel, Z. A., Jayawardana, M. A., Longley, R. W., … Chilvers, M. I. (2019, January 1). Phytobiomes Journal, Vol. 3, pp. 235–243.

Microbial communities associated with the black morel Morchella sextelata cultivated in greenhouses

Benucci, G. M. N., Longley, R., Zhang, P., Zhao, Q., Bonito, G., & Yu, F. (2019, September 26). PeerJ, Vol. 7, p. e7744.