Works (12)

Updated: January 17th, 2026 05:09

2026 article

P-1022. Modeling the Impact of Sampling Intensity on Observing C. difficile Transmission in Healthcare Settings

Curtis, S., Arya, S., & Lanzas, C. (2026, January 1). Open Forum Infectious Diseases, Vol. 1.

By: S. Curtis n, S. Arya n & C. Lanzas n

topics (OpenAlex): Clostridium difficile and Clostridium perfringens research; Infection Control in Healthcare; Antimicrobial Resistance in Staphylococcus
Sources: NC State University Libraries, NC State University Libraries
Added: January 13, 2026

2024 article

Is it selfish to be filamentous in biofilms? Individual-based modeling links microbial growth strategies with morphology using the new and modular iDynoMiCS 2.0

Cockx, B. J. R., Foster, T., Clegg, R. J., Alden, K., Arya, S., Stekel, D. J., … Kreft, J.-U. (2024, February 29). (J. Grilli, Ed.). PLoS Computational Biology.

Ed(s): J. Grilli

MeSH headings : Humans; Adaptation, Psychological; Algorithms; Altruism; Benchmarking; Biofilms
topics (OpenAlex): Bacterial biofilms and quorum sensing; Modular Robots and Swarm Intelligence; Micro and Nano Robotics; Microbial Community Ecology and Physiology; Slime Mold and Myxomycetes Research; Scientific Computing and Data Management
Source: ORCID
Added: May 8, 2024

2023 article

RootSlice—A novel functional‐structural model for root anatomical phenotypes

Sidhu, J. S., Ajmera, I., Arya, S., & Lynch, J. P. (2023, January 28). Plant Cell & Environment, Vol. 46, pp. 1671–1690.

Contributors: J. Sidhu*, I. Ajmera*, S. Arya* & J. Lynch*

MeSH headings : Plant Roots / metabolism; Phenotype; Zea mays / metabolism; Nitrogen / metabolism; Soil
topics (OpenAlex): Plant responses to water stress; Plant nutrient uptake and metabolism; Plant Stress Responses and Tolerance
Source: ORCID
Added: May 8, 2024

2023 article

A model of antibiotic resistance genes accumulation through lifetime exposure from food intake and antibiotic treatment

Todman, H., Arya, S., Baker, M., & Stekel, D. J. (2023, August 17). (R. Santos, Ed.). PLoS ONE, Vol. 18, p. e0289941.

By: H. Todman*, S. Arya*, M. Baker* & D. Stekel*

Contributors: H. Todman*, S. Arya*, M. Baker* & D. Stekel*

Ed(s): R. Santos

MeSH headings : Humans; Anti-Bacterial Agents / pharmacology; Anti-Bacterial Agents / therapeutic use; Dietary Exposure; Drug Discovery; Drug Resistance, Microbial / genetics; Eating
topics (OpenAlex): Gut microbiota and health; Pharmaceutical and Antibiotic Environmental Impacts; Antibiotic Resistance in Bacteria
TL;DR: It is concluded that a holistic approach to antimicrobial resistance that additionally incorporates food production and dietary considerations will be more effective in reducing resistant infections than a purely medical-based approach. (via Semantic Scholar)
Sources: Web Of Science, ORCID, NC State University Libraries
Added: September 18, 2023

2023 article

Is it selfish to be filamentous in biofilms? Individual-based modeling links microbial growth strategies with morphology using the new and modular iDynoMiCS 2.0

Cockx, B. J. R., Foster, T., Clegg, R. J., Alden, K., Arya, S., Stekel, D. J., … Kreft, J.-U. (2023, June 30). BioRxiv (Cold Spring Harbor Laboratory).

Contributors: B. Cockx*, T. Foster*, R. Clegg*, K. Alden*, S. Arya*, D. Stekel*, B. Smets*, J. Kreft*

topics (OpenAlex): Micro and Nano Robotics; Modular Robots and Swarm Intelligence; 3D Printing in Biomedical Research
Source: ORCID
Added: May 8, 2024

2022 article

RootSlice– a novel functional-structural model for root anatomical phenotypes

Sidhu, J. S., Ajmera, I., Arya, S., & Lynch, J. P. (2022, June 30). BioRxiv (Cold Spring Harbor Laboratory), Vol. 6.

Contributors: S. Arya*

topics (OpenAlex): Plant responses to water stress; Plant nutrient uptake and metabolism; Plant Stress Responses and Tolerance
Source: ORCID
Added: May 8, 2024

2021 article

Towards a general model for predicting minimal metal concentrations co-selecting for antibiotic resistance plasmids

Arya, S., Williams, A., Reina, S. V., Knapp, C. W., Kreft, J.-U., Hobman, J. L., & Stekel, D. J. (2021, February 6). Environmental Pollution, Vol. 275, p. 116602.

Contributors: S. Arya*, A. Williams*, S. Reina*, C. Knapp*, J. Kreft*, J. Hobman*, D. Stekel*

MeSH headings : Animals; Copper / analysis; Drug Resistance, Microbial / genetics; Manure; Metals, Heavy / analysis; Plasmids; Soil; Soil Pollutants / analysis
topics (OpenAlex): Pharmaceutical and Antibiotic Environmental Impacts; Antibiotic Resistance in Bacteria; Pesticide and Herbicide Environmental Studies
Source: ORCID
Added: May 8, 2024

2020 article

A generalised model for generalised transduction: the importance of co-evolution and stochasticity in phage mediated antimicrobial resistance transfer

Arya, S., Todman, H., Baker, M., Hooton, S., Millard, A., Kreft, J.-U., … Stekel, D. J. (2020, June 2). FEMS Microbiology Ecology, Vol. 96.

MeSH headings : Anti-Bacterial Agents / pharmacology; Bacteria / genetics; Bacteriophages / genetics; Drug Resistance, Bacterial; Plasmids
topics (OpenAlex): Bacteriophages and microbial interactions; Evolution and Genetic Dynamics; Microbial infections and disease research
UN Sustainable Development Goals Color Wheel
UN Sustainable Development Goal Categories
3. Good Health and Well-being (OpenAlex)
Source: ORCID
Added: May 8, 2024

2020 article

Towards a general model for predicting minimal metal concentrations co-selecting for antibiotic resistance plasmids

Arya, S., Williams, A., Reina, S. V., Knapp, C. W., Kreft, J.-U., Hobman, J. L., & Stekel, D. J. (2020, September 14). BioRxiv (Cold Spring Harbor Laboratory).

By: S. Arya*, A. Williams, S. Reina*, C. Knapp*, J. Kreft*, J. Hobman*, D. Stekel

Contributors: S. Arya*, A. Williams, S. Reina*, C. Knapp*, J. Kreft*, J. Hobman*, D. Stekel

topics (OpenAlex): Pharmaceutical and Antibiotic Environmental Impacts; Antibiotic Resistance in Bacteria; Pesticide and Herbicide Environmental Studies
Source: ORCID
Added: May 8, 2024

2019 article

Computational Prediction of sRNA in Acinetobacter baumannii

Arya, S., Dubey, V., Sen, D., Sharma, A., & Pathania, R. (2019, January 1). Methods in Molecular Biology, Vol. 1946, pp. 307–320.

By: S. Arya*, V. Dubey*, D. Sen*, A. Sharma* & R. Pathania*

Contributors: S. Arya*, V. Dubey*, D. Sen*, A. Sharma* & R. Pathania*

MeSH headings : Acinetobacter baumannii / classification; Acinetobacter baumannii / genetics; Algorithms; Computational Biology / methods; Databases, Genetic; Gene Expression Profiling; Gene Expression Regulation, Bacterial; Genome, Bacterial; Genomics / methods; Phylogeny; RNA, Bacterial; RNA, Small Untranslated / genetics; Software
topics (OpenAlex): Genomics and Phylogenetic Studies; RNA and protein synthesis mechanisms; RNA modifications and cancer
UN Sustainable Development Goals Color Wheel
UN Sustainable Development Goal Categories
15. Life on Land (OpenAlex)
Source: ORCID
Added: May 8, 2024

2017 article

Metal Resistance and Its Association With Antibiotic Resistance

Pal, C., Asiani, K., Arya, S., Rensing, C., Stekel, D. J., Larsson, D. G. J., & Hobman, J. L. (2017, January 1). Advances in Microbial Physiology/Advances in Microbial Physiology, Vol. 70, pp. 261–313.

Contributors: C. Pal*, K. Asiani*, S. Arya*, C. Rensing*, D. Stekel*, D. Larsson*, J. Hobman*

MeSH headings : Animals; Anti-Bacterial Agents / pharmacology; Anti-Infective Agents / pharmacology; Bacteria / drug effects; Bacteria / genetics; Bacteria / metabolism; Drug Resistance, Multiple, Bacterial / drug effects; Drug Resistance, Multiple, Bacterial / genetics; Humans; Ion Pumps / drug effects; Ion Pumps / genetics; Metals / pharmacology; R Factors / drug effects; R Factors / genetics; Selection, Genetic / drug effects
topics (OpenAlex): Pharmaceutical and Antibiotic Environmental Impacts; Antibiotic Resistance in Bacteria; Bacterial biofilms and quorum sensing
UN Sustainable Development Goals Color Wheel
UN Sustainable Development Goal Categories
3. Good Health and Well-being (OpenAlex)
Source: ORCID
Added: May 8, 2024

2014 article

Identification of Novel Regulatory Small RNAs in Acinetobacter baumannii

Sharma, R., Arya, S., Patil, S. D., Sharma, A., Jain, P. K., Navani, N. K., & Pathania, R. (2014, April 4). (J. Pratap, Ed.). PLoS ONE, Vol. 9, p. e93833.

Ed(s): J. Pratap

MeSH headings : Acinetobacter baumannii / genetics; Algorithms; Blotting, Northern; Computational Biology / methods; Drug Resistance, Bacterial / genetics; Ethidium; Gene Expression Profiling; Gene Expression Regulation / genetics; Oligonucleotides / genetics; RNA, Small Untranslated / genetics; RNA, Small Untranslated / metabolism; Real-Time Polymerase Chain Reaction
topics (OpenAlex): Antibiotic Resistance in Bacteria; Bacteriophages and microbial interactions; Bacterial Genetics and Biotechnology
UN Sustainable Development Goals Color Wheel
UN Sustainable Development Goal Categories
15. Life on Land (OpenAlex)
Source: ORCID
Added: May 8, 2024

Employment

Updated: November 15th, 2022 12:41

2022 - present

North Carolina State University Raleigh, North Carolina, US
Postdoctoral Research Scholar Department of Population Health and Pathobiology

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