Thomas Conrad Wiegers
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Works (26)
Updated: July 21st, 2023 21:14
2022 article
Comparative Toxicogenomics Database (CTD): update 2023
Davis, A. P., Wiegers, T. C., Johnson, R. J., Sciaky, D., Wiegers, J., & Mattingly, C. J. (2022, September 28). NUCLEIC ACIDS RESEARCH, Vol. 9.
MeSH headings : Humans; Toxicogenetics; Databases, Factual; Phenotype
academic.oup.com (publisher PDF)
Sources: Web Of Science, ORCID
Added: October 11, 2022
2021 journal article
CTD anatomy: Analyzing chemical-induced phenotypes and exposures from an anatomical perspective, with implications for environmental health studies
CURRENT RESEARCH IN TOXICOLOGY, 2, 128–139.
author keywords: Anatomy; Chemical; Phenotype; Disease; Environmental health; Database
Sources: Web Of Science, ORCID
Added: January 3, 2022
2021 journal article
Comparative Toxicogenomics Database (CTD): update 2021
NUCLEIC ACIDS RESEARCH, 49(D1), D1138–D1143.
MeSH headings : Databases, Chemical; Databases, Factual; Databases, Genetic; Gene-Environment Interaction; Genome, Human / drug effects; Genomics / methods; Genotype; Humans; Internet; Knowledge Bases; Organ Specificity; Phenotype; Prescription Drugs / chemistry; Prescription Drugs / pharmacology; Software; Toxicogenetics / methods; Xenobiotics / chemistry; Xenobiotics / toxicity
Sources: Web Of Science, ORCID
Added: February 8, 2021
2021 journal article
Predicting molecular mechanisms, pathways, and health outcomes induced by Juul e-cigarette aerosol chemicals using the Comparative Toxicogenomics Database
CURRENT RESEARCH IN TOXICOLOGY, 2, 272–281.
author keywords: E-cigarettes; Vaping; Juul; Respiratory disease; Database; Environmental exposure
Sources: Web Of Science, ORCID
Added: January 3, 2022
2021 journal article
Regulatory status of pesticide residues in cannabis: Implications to medical use in neurological diseases
CURRENT RESEARCH IN TOXICOLOGY, 2, 140–148.
author keywords: Cannabis; Pesticide; Database; Regulation; Seizure; Contaminant
Sources: Web Of Science, ORCID
Added: January 3, 2022
2020 journal article
Leveraging the Comparative Toxicogenomics Database to Fill in Knowledge Gaps for Environmental Health: A Test Case for Air Pollution-induced Cardiovascular Disease
TOXICOLOGICAL SCIENCES, 177(2), 392–404.
author keywords: environmental health; chemical-induced pathways; air pollution; cardiovascular disease; database
MeSH headings : Air Pollutants / toxicity; Air Pollution; Cardiovascular Diseases / chemically induced; Environmental Exposure; Environmental Health; Humans; Toxicogenetics
Sources: Web Of Science, ORCID
Added: December 14, 2020
2019 journal article
The Comparative Toxicogenomics Database: update 2019
NUCLEIC ACIDS RESEARCH, 47(D1), D948–D954.
MeSH headings : Databases, Pharmaceutical; Disease / genetics; Environmental Exposure; Humans; Phenotype; Toxicogenetics; Vocabulary, Controlled
Sources: Web Of Science, ORCID
Added: April 9, 2019
2018 journal article
Accessing an Expanded Exposure Science Module at the Comparative Toxicogenomics Database
ENVIRONMENTAL HEALTH PERSPECTIVES, 126(1).
MeSH headings : Databases, Factual; Environmental Exposure / adverse effects; Gene Ontology; Humans; Phenotype; Toxicogenetics
Sources: Web Of Science, ORCID
Added: August 6, 2018
2018 journal article
Chemical-Induced Phenotypes at CTD Help Inform the Predisease State and Construct Adverse Outcome Pathways
TOXICOLOGICAL SCIENCES, 165(1), 145–156.
author keywords: phenotype; database; curation; chemical; disease; adverse outcome pathway
MeSH headings : Adverse Outcome Pathways; Animals; Databases, Factual; Drug-Related Side Effects and Adverse Reactions / genetics; Gene Ontology; Gene-Environment Interaction; Humans; Phenotype; Toxicogenetics / methods
Sources: Web Of Science, ORCID
Added: October 16, 2018
2017 journal article
The Comparative Toxicogenomics Database: update 2017
NUCLEIC ACIDS RESEARCH, 45(D1), D972–D978.
MeSH headings : Computational Biology / methods; Databases, Chemical; Databases, Genetic; Gene Ontology; Humans; Search Engine; Signal Transduction; Toxicogenetics / methods; User-Computer Interface; Web Browser
Sources: Web Of Science, ORCID
Added: August 6, 2018
2016 journal article
Advancing Exposure Science through Chemical Data Curation and Integration in the Comparative Toxicogenomics Database
Environmental Health Perspectives, 124(10), 1592–1599.
Sources: Web Of Science, ORCID, Crossref
Added: August 6, 2018
2016 journal article
Assessing the state of the art in biomedical relation extraction: overview of the BioCreative V chemical-disease relation (CDR) task
DATABASE-THE JOURNAL OF BIOLOGICAL DATABASES AND CURATION.
MeSH headings : Biomedical Research; Data Mining / methods; Databases, Factual; Disease; Humans; Statistics as Topic; Time Factors
Sources: Web Of Science, ORCID
Added: August 6, 2018
2016 journal article
BioCreative V CDR task corpus: a resource for chemical disease relation extraction
DATABASE-THE JOURNAL OF BIOLOGICAL DATABASES AND CURATION.
MeSH headings : Computational Biology / methods; Data Mining / methods; Databases, Factual; Disease; Humans; Toxicogenetics / methods
Sources: Web Of Science, ORCID
Added: August 6, 2018
2016 journal article
Generating Gene Ontology-Disease Inferences to Explore Mechanisms of Human Disease at the Comparative Toxicogenomics Database
PLOS ONE, 11(5).
MeSH headings : Computational Biology; Databases, Genetic; Disease / genetics; Drug Repositioning; Gene Ontology; Humans; Toxicogenetics
Sources: Web Of Science, ORCID
Added: August 6, 2018
2016 journal article
ToxEvaluator: an integrated computational platform to aid the interpretation of toxicology study-related findings
DATABASE-THE JOURNAL OF BIOLOGICAL DATABASES AND CURATION.
MeSH headings : Animals; Computational Biology / methods; Computer Simulation; Database Management Systems; Databases, Factual; Humans; Mice; Toxicogenetics / methods; User-Computer Interface
Sources: Web Of Science, ORCID
Added: August 6, 2018
2015 journal article
The Comparative Toxicogenomics Database's 10th year anniversary: update 2015
NUCLEIC ACIDS RESEARCH, 43(D1), D914–D920.
MeSH headings : Databases, Chemical / history; Disease / etiology; Disease / genetics; Genomics / history; History, 21st Century; Internet; Phenotype; Toxicogenetics / history
Sources: Web Of Science, ORCID
Added: August 6, 2018
2014 journal article
BioC interoperability track overview
DATABASE-THE JOURNAL OF BIOLOGICAL DATABASES AND CURATION.
MeSH headings : Biomedical Research; Computational Biology; Data Mining; Database Management Systems; Databases, Factual; Internet; Natural Language Processing; Software
Sources: Web Of Science, ORCID
Added: August 6, 2018
2014 article
BioCreative-IV virtual issue
Arighi, C. N., Wu, C. H., Cohen, K. B., Hirschman, L., Krallinger, M., Valencia, A., … Wiegers, T. C. (2014, May 22). DATABASE-THE JOURNAL OF BIOLOGICAL DATABASES AND CURATION.
MeSH headings : Computational Biology; Congresses as Topic; Data Mining; Databases as Topic; Gene Ontology; Natural Language Processing
Source: Web Of Science
Added: August 6, 2018
2014 journal article
Web services-based text-mining demonstrates broad impacts for interoperability and process simplification
DATABASE-THE JOURNAL OF BIOLOGICAL DATABASES AND CURATION.
MeSH headings : Data Mining / methods; Databases, Chemical; Databases, Genetic; Disease / genetics; Genes; Internet; Time Factors; Toxicogenetics
Sources: Web Of Science, ORCID
Added: August 6, 2018
2013 journal article
A CTD-Pfizer collaboration: manual curation of 88 000 scientific articles text mined for drug-disease and drug-phenotype interactions
DATABASE-THE JOURNAL OF BIOLOGICAL DATABASES AND CURATION.
MeSH headings : Cooperative Behavior; Data Mining; Databases, Factual; Disease; Drug Industry; Humans; Pharmaceutical Preparations / metabolism; Phenotype; Publications; Toxicogenetics
Sources: Web Of Science, ORCID
Added: August 6, 2018
2013 journal article
BioC: a minimalist approach to interoperability for biomedical text processing
DATABASE-THE JOURNAL OF BIOLOGICAL DATABASES AND CURATION.
MeSH headings : Biomedical Research; Data Mining; Humans; Natural Language Processing; Software
Source: Web Of Science
Added: August 6, 2018
2013 journal article
Text Mining Effectively Scores and Ranks the Literature for Improving Chemical-Gene-Disease Curation at the Comparative Toxicogenomics Database
PLOS ONE, 8(4).
MeSH headings : Algorithms; Data Mining / methods; Databases, Factual; Disease / genetics; Documentation; Humans; Metals, Heavy / toxicity; Molecular Sequence Annotation; Publications; Reproducibility of Results; Toxicogenetics
Sources: Web Of Science, ORCID
Added: August 6, 2018
2012 article
BioCreative-2012 Virtual Issue
Wu, C. H., Arighi, C. N., Cohen, K. B., Hirschman, L., Krallinger, M., Lu, Z. Y., … al. (2012, December 5). DATABASE-THE JOURNAL OF BIOLOGICAL DATABASES AND CURATION.
MeSH headings : Congresses as Topic; Cooperative Behavior; Data Mining; Databases, Genetic; Periodicals as Topic; Workflow
Sources: Web Of Science, ORCID
Added: August 6, 2018
2012 journal article
Collaborative biocuration--text-mining development task for document prioritization for curation
Database, 2012(0), bas037–bas037.
MeSH headings : Cooperative Behavior; Data Mining / methods; Databases, Genetic; Disease; Documentation / methods; Genes; Humans; Internet; Toxicogenetics; User-Computer Interface
Sources: Web Of Science, Crossref, ORCID
Added: August 6, 2018
2012 journal article
Ranking Transitive Chemical-Disease Inferences Using Local Network Topology in the Comparative Toxicogenomics Database
PLOS ONE, 7(11).
MeSH headings : Cluster Analysis; Databases, Factual; Drug-Related Side Effects and Adverse Reactions / genetics; Gene Regulatory Networks; Humans; Protein Interaction Mapping; Toxicogenetics / methods
Sources: Web Of Science, ORCID
Added: August 6, 2018
2012 journal article
Targeted journal curation as a method to improve data currency at the Comparative Toxicogenomics Database
Database-The Journal of Biological Databases and Curation.
Source: NC State University Libraries
Added: August 6, 2018
