Tatyana Smirnova

Degtyareva, N. P., Placentra, V. C., Gabel, S. A., Klimczak, L. J., Gordenin, D. A., Wagner, B. A., … Doetsch, P. W. (2023, April 20). Changes in metabolic landscapes shape divergent but distinct mutational signatures and cytotoxic consequences of redox stress. NUCLEIC ACIDS RESEARCH, Vol. 4. https://doi.org/10.1093/nar/gkad305

Voinov, M. A., Smirnova, T. I., & Smirnov, A. I. (2021, November 20). EPR Oximetry with Nitroxides: Effects of Molecular Structure, pH, and Electrolyte Concentration. APPLIED MAGNETIC RESONANCE, Vol. 11. https://doi.org/10.1007/s00723-021-01446-8

Saikia, N., Yanez-Orozco, I. S., Qiu, R., Hao, P., Milikisiyants, S., Ou, E., … Ding, F. (2021). Integrative structural dynamics probing of the conformational heterogeneity in synaptosomal-associated protein 25. CELL REPORTS PHYSICAL SCIENCE, 2(11). https://doi.org/10.1016/j.xcrp.2021.100616

Myers, B., Ranieri, P., Smirnova, T., Hewitt, P., Peterson, D., Quesada, M. H., … Stapelmann, K. (2021). Measuring plasma-generated center dot OH and O atoms in liquid using EPR spectroscopy and the non-selectivity of the HTA assay. JOURNAL OF PHYSICS D-APPLIED PHYSICS, 54(14). https://doi.org/10.1088/1361-6463/abd9a6

Cha, L., Milikisiyants, S., Davidson, M., Xue, S., Smirnova, T. I., Smirnov, A. I., … Chang, W.-C. (2020). Alternative Reactivity of Leucine 5-Hydroxylase Using an Olefin-Containing Substrate to Construct a Substituted Piperidine Ring. BIOCHEMISTRY, 59(21), 1961–1965. https://doi.org/10.1021/acs.biochem.0c00289

Perelygin, V., Voinov, M. A., Marek, A., Ou, E., Krim, J., Brenner, D., … Smirnov, A. I. (2019). Dielectric and Electrostatic Properties of the Silica Nanoparticle-Water Interface by EPR of pH-Sensitive Spin Probes. JOURNAL OF PHYSICAL CHEMISTRY C, 123(49), 29972–29985. https://doi.org/10.1021/acs.jpcc.9b08007

Smirnova, T. I., & Smirnov, A. I. (2019). EPR studies of bionanomaterials. ELECTRON MAGNETIC RESONANCE - APPLICATIONS IN PHYSICAL SCIENCES AND BIOLOGY, Vol. 50, pp. 129–159. https://doi.org/10.1016/B978-0-12-814024-6.00007-8

Ou, E., Voinov, M., Irving, A., Smirnov, A., & Smirnova, T. I. (2019). Effect of Silica Support on Electrostatics of Lipid Interfaces in Nano-Bio Hybrid Systems. Biophysical Journal, 116(3), 81a. https://doi.org/10.1016/J.BPJ.2018.11.479

Choi, U. B., Sanabria, H., Smirnova, T., Bowen, M. E., & Weninger, K. R. (2019). [Review of Spontaneous Switching among Conformational Ensembles in Intrinsically Disordered Proteins]. BIOMOLECULES, 9(3). https://doi.org/10.3390/biom9030114

Yu, C.-P., Tang, Y., Cha, L., Milikisiyants, S., Smirnova, T. I., Smirnov, A. I., … Chang, W.-chen. (2018). Elucidating the Reaction Pathway of Decarboxylation-Assisted Olefination Catalyzed by a Mononuclear Non-Heme Iron Enzyme. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 140(45), 15190–15193. https://doi.org/10.1021/jacs.8b10077

Ou, E., Voinov, M. A., Smirnov, A. I., & Smirnova, T. I. (2018). Silica-Supported Lipid Bilayers: Electrostatic Effects at Lipid Interfaces as Reported by Spin-Labeling EPR. Biophysical Journal, 114(3), 96a. https://doi.org/10.1016/J.BPJ.2017.11.565

Chestnut, M., Milikisiyants, S., Koolivand, A., Voynov, M. A., Smirnova, T. I., & Smirnov, A. I. (2018). Using Hyscore Spectroscopy of Nitroxides to Profile Water Content of Lipid Bilayers with 2 Å Spatial Resolution. Biophysical Journal, 114(3), 16a. https://doi.org/10.1016/J.BPJ.2017.11.130

Ou, E., Voinov, M., Smirnov, A. I., & Smirnova, T. I. (2017). Effects of Silica Support on Dynamics of Transmembrane Peptides and Effective p K a of Ionisable Sidechains. Biophysical Journal, 112(3), 175a. https://doi.org/10.1016/J.BPJ.2016.11.967

Mitra, R. N., Gao, R., Zheng, M., Wu, M.-J., Voinov, M. A., Smirnov, A. I., … Han, Z. (2017). Glycol Chitosan Engineered Autoregenerative Antioxidant Significantly Attenuates Pathological Damages in Models of Age-Related Macular Degeneration. ACS Nano, 11(5), 4669–4685. https://doi.org/10.1021/acsnano.7b00429

Milikisiyants, S., Wang, S., Munro, R. A., Donohue, M., Ward, M. E., Bolton, D., … Smirnov, A. I. (2017). Oligomeric Structure of Anabaena Sensory Rhodopsin in a Lipid Bilayer Environment by Combining Solid-State NMR and Long-range DEER Constraints. JOURNAL OF MOLECULAR BIOLOGY, 429(12), 1903–1920. https://doi.org/10.1016/j.jmb.2017.05.005

McCombs, N. L., Smirnova, T., & Ghiladi, R. A. (2017). Oxidation of pyrrole by dehaloperoxidase-hemoglobin: chemoenzymatic synthesis of pyrrolin-2-ones. CATALYSIS SCIENCE & TECHNOLOGY, 7(14), 3104–3118. https://doi.org/10.1039/c7cy00781g

Luo, L., Ou, E., Smirnova, T. I., & Maggard, P. A. (2016). Synthesis of New Mixed-Metal Ammonium Vanadates: Cation Order versus Disorder, and Optical and Photocatalytic Properties. CRYSTAL GROWTH & DESIGN, 16(10), 5762–5770. https://doi.org/10.1021/acs.cgd.6b00851

Roberts, J. G., Voinov, M. A., Schmidt, A. C., Smirnova, T. I., & Sombers, L. A. (2016). The Hydroxyl Radical is a Critical Intermediate in the Voltammetric Detection of Hydrogen Peroxide. Journal of the American Chemical Society, 138(8), 2516–2519. https://doi.org/10.1021/jacs.5b13376

Weninger, K., Qiu, R., Ou, E., Milikisiyants, S., Sanabria, H., & Smirnova, T. I. (2016). smFRET and DEER Distance Measurements as Applied to Disordered and Structured Proteins. Biophysical Journal, 110(3), 559a. https://doi.org/10.1016/J.BPJ.2015.11.2987

Milikisiyants, S., Wang, S., Munro, R., Donohue, M., Brown, L. S., Smirnova, T. I., … Smirnov, A. I. (2015). Determining Oligomeric Order of a Membrane Protein by Double Electron-Electron Resonance Spectroscopy. Biophysical Journal, 108(2), 93a. https://doi.org/10.1016/J.BPJ.2014.11.541

Huang, T., Wu, X., Song, X., Xu, H., Smirnova, T. I., Weare, W. W., & Sommer, R. D. (2015). Ferromagnetic coupling in d(1)-d(3) linear oxido-bridged heterometallic complexes: ground-state models of metal-to-metal charge transfer excited states. DALTON TRANSACTIONS, 44(43), 18937–18944. https://doi.org/10.1039/c5dt02719e

Luo, L., Zeng, Y., Li, L., Luo, Z., Smirnova, T. I., & Maggard, P. A. (2015). Manganese-Vanadate Hybrids: Impact of Organic Ligands on Their Structures, Thermal Stabilities, Optical Properties, and Photocatalytic Activities. INORGANIC CHEMISTRY, 54(15), 7388–7401. https://doi.org/10.1021/acs.inorgchem.5b00931

Donohue, M., Voynov, M., Milikisiyants, S., Smirnov, A. I., & Smirnova, T. I. (2015). “Snorkeling” of the Charged Sidechain of a Transmembrane Peptide as Directly Observed by Double Electron-Electron Resonance Experiment. Biophysical Journal, 108(2), 203a. https://doi.org/10.1016/J.BPJ.2014.11.1120

Luo, L., Lin, H., Li, L., Smirnova, T. I., & Maggard, P. A. (2014). Copper-Organic/Octamolybdates: Structures, Bandgap Sizes, and Photocatalytic Activities. Inorganic Chemistry, 53(7), 3464–3470. https://doi.org/10.1021/IC402910A

Meng, J., Smirnova, T. I., Song, X., Moore, A., Ren, X., Kelley, S., … Tilotta, D. (2014). Identification of free radicals in pyrolysis oil and their impact on bio-oil stability. RSC ADVANCES, 4(56), 29840–29846. https://doi.org/10.1039/c4ra02007c

Donohue, M., Voynov, M. A., Smirnov, A. I., & Smirnova, T. I. (2014). Profiling the Dielectric Constant at the Membrane-Peptide Interface using Ionizable EPR Probes. Biophysical Journal, 106(2), 508a. https://doi.org/10.1016/J.BPJ.2013.11.2841

Quinones, M. C., Bankaitis, V. A., & Smirnova, T. I. (2014). Structure, Dynamics, and Electrostatic Effects on Membrane Binding of Nod Peptides. Biophysical Journal, 106(2), 295a. https://doi.org/10.1016/J.BPJ.2013.11.1719

Li, J., Wang, K., Smirnova, T. I., Khade, R. L., Zhang, Y., & Oldfield, E. (2013). Isoprenoid Biosynthesis: Ferraoxetane or Allyl Anion Mechanism for IspH Catalysis? ANGEWANDTE CHEMIE-INTERNATIONAL EDITION, 52(25), 6522–6525. https://doi.org/10.1002/anie.201302343

Donohue, M., Voynov, M. A., Smirnov, A. I., & Smirnova, T. I. (2013). Molecular pH Probes at a Protein-Lipid Interface: Assessment of Local Dielectric Environment for Transmembrane Peptide. Biophysical Journal, 104(2), 373a. https://doi.org/10.1016/j.bpj.2012.11.2073

Young, H. E., Donohue, M. P., Smirnova, T. I., Smirnov, A. I., & Zhou, P. (2013). The UDP-diacylglucosamine Pyrophosphohydrolase LpxH in Lipid A Biosynthesis Utilizes Mn2+ Cluster for Catalysis. JOURNAL OF BIOLOGICAL CHEMISTRY, 288(38), 26987–27001. https://doi.org/10.1074/jbc.m113.497636

Dumarieh, R., D'Antonio, J., Deliz-Liang, A., Smirnova, T., Svistunenko, D. A., & Ghiladi, R. A. (2013). Tyrosyl Radicals in Dehaloperoxidase. Journal of Biological Chemistry, 288(46), 33470–33482. https://doi.org/10.1074/JBC.M113.496497

Dumarieh, R., D'Antonio, J., Deliz-Liang, A., Smirnova, T., Svistunenko, D. A., & Ghiladi, R. A. (2013). Tyrosyl radicals in dehaloperoxidase how nature deals with evolving an oxygen-binding globin to a biologically relevant peroxidase. Journal of Biological Chemistry, 288(46), 33470–33482.

Smirnova, T. I., Voynov, M. A., Poluektov, O. G., & Smirnov, A. I. (2012). Probing Dielectric and Hydrogen Bonding Gradients in Biological Membranes. Biophysical Journal, 102(3), 414a. https://doi.org/10.1016/j.bpj.2011.11.2262

Wang, W., Wang, K., Li, J., Nellutla, S., Smirnova, T. I., & Oldfield, E. (2011). An ENDOR and HYSCORE Investigation of a Reaction Intermediate in IspG (GcpE) Catalysis. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 133(22), 8400–8403. https://doi.org/10.1021/ja200763a

Wang, W., Li, J., Wang, K., Smirnova, T. I., & Oldfield, E. (2011). Pyridine Inhibitor Binding to the 4Fe-4S Protein A. aeolicus IspH (LytB): A HYSCORE Investigation. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 133(17), 6525–6528. https://doi.org/10.1021/ja2008455

Schaaf, G., Dynowski, M., Mousley, C. J., Shah, S. D., Yuan, P., Winklbauer, E. M., … Bankaitis, V. A. (2011). Resurrection of a functional phosphatidylinositol transfer protein from a pseudo-Sec14 scaffold by directed evolution. MOLECULAR BIOLOGY OF THE CELL, 22(6), 892–905. https://doi.org/10.1091/mbc.e10-11-0903

Smirnova, T. I., Chadwick, T. G., Bankaitis, V. A., Schaaf, G., Poluektov, O. G., & Smirnov, A. I. (2011). Role of Electrostatic and Hydrogen Bonding Environment in Sequestering Lipids from Membranes Into the Sec14 Protein Cavity. Biophysical Journal, 100(3), 552a–553a. https://doi.org/10.1016/j.bpj.2010.12.3215

Voinov, M. A., Pagán Jason O. Sosa, Morrison, E., Smirnova, T. I., & Smirnov, A. I. (2011). Surface-Mediated Production of Hydroxyl Radicals as a Mechanism of Iron Oxide Nanoparticle Biotoxicity. Journal of the American Chemical Society, 133(1), 35–41. https://doi.org/10.1021/ja104683w

Smirnova, T. I., Voynov, M. A., Poluektov, O. G., & Smirnov, A. I. (2010). Heterogeneous Dielectric and Hydrogen Bonding Environment of Transmembrane Peptides. Biophysical Journal, 98(3), 87a. https://doi.org/10.1016/j.bpj.2009.12.494

D’Antonio, J., D’Antonio, E. L., Thompson, M. K., Bowden, E. F., Franzen, S., Smirnova, T., & Ghiladi, R. A. (2010). Spectroscopic and Mechanistic Investigations of Dehaloperoxidase B fromAmphitrite ornata. Biochemistry, 49(31), 6600–6616. https://doi.org/10.1021/bi100407v

Feducia, J., Dumarieh, R., Gilvey, L. B. G., Smirnova, T., Franzen, S., & Ghiladi, R. A. (2009). Characterization of Dehaloperoxidase Compound ES and Its Reactivity with Trihalophenols†. Biochemistry, 48(5), 995–1005. https://doi.org/10.1021/bi801916j

Chadwick, T. G., Rabah, G. A., Davies, B. R., & Smirnova, T. I. (2009). Membrane insertion of peptides mimicking E2 domain of Sindbis virus is modulated by cholesterol. Biophysical Journal, 96(3), 389a–390a. https://doi.org/10.1016/j.bpj.2008.12.2910

Ghiladi, R. A., Dumarieh, R., Thompson, M., Wang, Z., Smirnova, T., & Franzen, S. (2009). Spectroscopic Probes of the Reactive Intermediates of Dehaloperoxidase from Amphitrite ornata. Biophysical Journal, 96(3), 437a. https://doi.org/10.1016/j.bpj.2008.12.2240

Smirnova, T. I., Davis, M. F., Weber, R. T., & Franzen, S. (2009). Substrate binding triggers a switch in the iron coordination in dehaloperoxidase from Amphitrite Ornate. Biophysical Journal, 96(3), 437a. https://doi.org/10.1016/j.bpj.2008.12.2241

Smirnova, T. I., Smirnov, A. I., Chadwick, T. G., & Walker, K. L. (2008). Characterization of magnetic and electronic properties of trimetallic nitride endohedral fullerenes by SQUID magnetometry and electron paramagnetic resonance. CHEMICAL PHYSICS LETTERS, 453(4-6), 233–237. https://doi.org/10.1016/j.cplett.2008.01.036

Smirnova, T. I., Weber, R. T., Davis, M. F., & Franzen, S. (2008). Substrate binding triggers a switch in the iron coordination in dehaloperoxidase from Amphitrite ornata: HYSCORE experiments. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 130(7), 2128-+. https://doi.org/10.1021/ja0772952

Smirnova, T. I. (2007). Binding of MRI contrast agents to albumin: a high-field EPR study. APPLIED MAGNETIC RESONANCE, 31(3-4), 431–446. https://doi.org/10.1007/BF03166594

Smirnova, T. I., Smirnov, A. I., Paschenko, S. V., & Poluektov, O. G. (2007). Geometry of hydrogen bonds formed by lipid bilayer nitroxide probes: A high-frequency pulsed ENDOR/EPR study. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 129(12), 3476-+. https://doi.org/10.1021/ja068395v

Smirnova, T. I., Chadwick, T. G., Voinov, M. A., Poluektov, O., Tol, J., Ozarowski, A., … Bankaitis, V. A. (2007). Local polarity and hydrogen bonding inside the Sec14p phospholipid-binding cavity: High-field multi-frequency electron paramagnetic resonance studies. BIOPHYSICAL JOURNAL, 92(10), 3686–3695. https://doi.org/10.1529/biophysj.106.097899

Smirnov, A. I., Smirnova, T. I., MacArthur, R. L., Good, J. A., & Hall, R. (2006). Cryogen-free superconducting magnet system for multifrequency electron paramagnetic resonance up to 12.1T. Review of Scientific Instruments, 77(3), 035108. https://doi.org/10.1063/1.2182571

Smirnova, T. I., Chadwick, T. G., MacArthur, R., Poluektov, O., Song, L., Ryan, M. M., … Bankaitis, V. A. (2006). The chemistry of phospholipid binding by the Saccharomyces cerevisiae phosphatidylinositol transfer protein Sec14p as determined by EPR spectroscopy. JOURNAL OF BIOLOGICAL CHEMISTRY, 281(46), 34897–34908. https://doi.org/10.1074/jbc.M603054200

Smirnova, T. I., & Smirnov, A. I. (2003). Dynamic molecular oxygen accessibility to a buried Mn2+ protein site: A high-field EPR experiment. JOURNAL OF PHYSICAL CHEMISTRY B, 107(29), 7212–7215. https://doi.org/10.1021/jp0349637

Smirnov, A. I., & Smirnova, T. I. (2001). Resolving domains of interdigitated phospholipid membranes with 95 GHz spin labeling EPR. APPLIED MAGNETIC RESONANCE, 21(3-4), 453–467. https://doi.org/10.1007/BF03162420

Clarkson, R. B., Smirnov, A. I., Smirnova, T. I., Kang, H., Belford, R. L., Earle, K., & Freed, J. H. (1998). Multi-frequency EPR determination of zero field splitting of high spin species in liquids: Gd(III) chelates in water. Molecular Physics, 95(6), 1325–1332. https://doi.org/10.1080/00268979809483262