@article{du_xiang_cheng_zhou_wang_soltis_soltis_2023, title={An updated phylogeny, biogeography, and PhyloCode-based classification of Cornaceae based on three sets of genomic data}, volume={2}, ISSN={["1537-2197"]}, url={https://doi.org/10.1002/ajb2.16116}, DOI={10.1002/ajb2.16116}, journal={AMERICAN JOURNAL OF BOTANY}, author={Du, Zhi-Yuan and Xiang, Qiu-Yun and Cheng, Jin and Zhou, Wenbin and Wang, Qing-Feng and Soltis, Douglas E. E. and Soltis, Pamela S. S.}, year={2023}, month={Feb} } @article{zhou_soghigian_xiang_2022, title={A New Pipeline for Removing Paralogs in Target Enrichment Data}, volume={71}, ISSN={["1076-836X"]}, DOI={10.1093/sysbio/syab044}, number={2}, journal={SYSTEMATIC BIOLOGY}, author={Zhou, Wenbin and Soghigian, John and Xiang, Qiu-Yun Jenny}, year={2022}, month={Feb}, pages={410–425} } @article{liu_ren_kwak_hodel_xu_he_zhou_huang_ma_qian_et al._2022, title={Phylogenomic conflict analyses in the apple genus Malus s.l. reveal widespread hybridization and allopolyploidy driving diversification, with insights into the complex biogeographic history in the Northern Hemisphere}, volume={64}, ISSN={["1744-7909"]}, DOI={10.1111/jipb.13246}, number={5}, journal={JOURNAL OF INTEGRATIVE PLANT BIOLOGY}, author={Liu, Bin-Bin and Ren, Chen and Kwak, Myounghai and Hodel, Richard G. J. and Xu, Chao and He, Jian and Zhou, Wen-Bin and Huang, Chien-Hsun and Ma, Hong and Qian, Guan-Ze and et al.}, year={2022}, month={May}, pages={1020–1043} } @article{zhou_xiang_2022, title={Phylogenomics AND biogeography of Castanea (chestnut) and Hamamelis (witch-hazel) - Choosing between RAD-seq and Hyb-Seq approaches}, volume={176}, ISSN={["1095-9513"]}, DOI={10.1016/j.ympev.2022.107592}, journal={MOLECULAR PHYLOGENETICS AND EVOLUTION}, author={Zhou, Wenbin and Xiang, Qiu-Yun}, year={2022}, month={Nov} } @article{zhou_harris_xiang_2022, title={Phylogenomics and biogeography of Torreya (Taxaceae)-Integrating data from three organelle genomes, morphology, and fossils and a practical method for reducing missing data from RAD-seq}, volume={2}, ISSN={["1759-6831"]}, url={https://doi.org/10.1111/jse.12838}, DOI={10.1111/jse.12838}, journal={JOURNAL OF SYSTEMATICS AND EVOLUTION}, publisher={Wiley}, author={Zhou, Wenbin and Harris, A. J. and Xiang, Qiu-Yun}, year={2022}, month={May} } @article{wahlsteen_zhou_xiang_rushforth_2021, title={Rediscovery of the lost little dogwood Cornus wardiana (Cornaceae)-Its phylogenetic and morphological distinction and implication in the origin of the Arctic-Sino-Himalayan disjunction}, volume={59}, ISSN={["1759-6831"]}, DOI={10.1111/jse.12576}, number={2}, journal={JOURNAL OF SYSTEMATICS AND EVOLUTION}, author={Wahlsteen, Eric and Zhou, Wenbin and Xiang, Qiuyun and Rushforth, Keith}, year={2021}, month={Mar}, pages={405–416} } @article{zhou_xiang_wen_2020, title={Phylogenomics, biogeography, and evolution of morphology and ecological niche of the eastern Asian-eastern North AmericanNyssa(Nyssaceae)}, volume={58}, ISSN={["1759-6831"]}, DOI={10.1111/jse.12599}, number={5}, journal={JOURNAL OF SYSTEMATICS AND EVOLUTION}, author={Zhou, Wenbin and Xiang, Qiu-Yun and Wen, Jun}, year={2020}, month={Sep}, pages={571–603} } @article{dong_chen_cheng_zhou_ma_chen_fu_liu_zhao_soltis_et al._2019, title={Natural selection and repeated patterns of molecular evolution following allopatric divergence}, volume={8}, ISSN={2050-084X}, url={http://dx.doi.org/10.7554/eLife.45199}, DOI={10.7554/eLife.45199}, abstractNote={Although geographic isolation is a leading driver of speciation, the tempo and pattern of divergence at the genomic level remain unclear. We examine genome-wide divergence of putatively single-copy orthologous genes (POGs) in 20 allopatric species/variety pairs from diverse angiosperm clades, with 16 pairs reflecting the classic eastern Asia-eastern North America floristic disjunction. In each pair, >90% of POGs are under purifying selection, and <10% are under positive selection. A set of POGs are under strong positive selection, 14 of which are shared by 10–15 pairs, and one shared by all pairs; 15 POGs are annotated to biological processes responding to various stimuli. The relative abundance of POGs under different selective forces exhibits a repeated pattern among pairs despite an ~10 million-year difference in divergence time. Species divergence times are positively correlated with abundance of POGs under moderate purifying selection, but negatively correlated with abundance of POGs under strong purifying selection.}, journal={eLife}, publisher={eLife Sciences Publications, Ltd}, author={Dong, Yibo and Chen, Shichao and Cheng, Shifeng and Zhou, Wenbin and Ma, Qing and Chen, Zhiduan and Fu, Cheng-Xin and Liu, Xin and Zhao, Yun-peng and Soltis, Pamela S and et al.}, year={2019}, month={Aug} } @article{zhou_ji_obata_pais_dong_peet_xiang_2018, title={Resolving relationships and phylogeographic history of the Nyssa sylvatica complex using data from RAD-seq and species distribution modeling}, volume={126}, ISSN={1055-7903}, url={http://dx.doi.org/10.1016/j.ympev.2018.04.001}, DOI={10.1016/j.ympev.2018.04.001}, journal={Molecular Phylogenetics and Evolution}, publisher={Elsevier BV}, author={Zhou, Wenbin and Ji, Xiang and Obata, Shihori and Pais, Andrew and Dong, Yibo and Peet, Robert and Xiang, Qiu-Yun (Jenny)}, year={2018}, month={Sep}, pages={1–16} }