Genomic Sciences - 2022

Kaltofen, E. L. (2022). The GKR Protocol Revisited: Nearly Optimal Prover-Complexity For Polynomial-Time Wiring Algorithms and For Primality Testing in n(1/2+o(1)) Rounds. PROCEEDINGS OF THE 2022 INTERNATIONAL SYMPOSIUM ON SYMBOLIC AND ALGEBRAIC COMPUTATION, ISSAC 2022, pp. 177–186. https://doi.org/10.1145/3476446.3536183

Kaltofen, E. L. (2022). Sparse Polynomial Hermite Interpolation. PROCEEDINGS OF THE 2022 INTERNATIONAL SYMPOSIUM ON SYMBOLIC AND ALGEBRAIC COMPUTATION, ISSAC 2022, pp. 469–478. https://doi.org/10.1145/3476446.3535501

Lewis, A. M., Jr., Thomas, R., Breen, M., Peden, K., Teferedegne, B., Foseh, G., … Lewis, G. (2022). The AGMK1-9T7 cell model of neoplasia: Evolution of DNA copy-number aberrations and miRNA expression during transition from normal to metastatic cancer cells. PLOS ONE, 17(10). https://doi.org/10.1371/journal.pone.0275394

Wang, H., Lu, Y., Zhang, T., Liu, Z., Cao, L., Chang, Q., … Zheng, Z. (2022, December 10). The double flower variant of yellowhorn is due to a LINE1 transposon-mediated insertion. PLANT PHYSIOLOGY. https://doi.org/10.1093/plphys/kiac571

Beall, M. J., Mainville, C. A., Arguello-Marin, A., Clark, G., Lemieux, C., Saucier, J., … Chandrashekar, R. (2022). An Improved Point-of-Care ELISA for the Diagnosis of Anaplasmosis and Ehrlichiosis During the Acute Phase of Tick-Borne Infections in Dogs. TOPICS IN COMPANION ANIMAL MEDICINE, 51. https://doi.org/10.1016/j.tcam.2022.100735

Bin-hui, Z., Xiu-ling, Y., Lommel, S. A., & Xue-ping, Z. (2022). [Review of Recent progress in maize lethal necrosis disease: From pathogens to integrated pest management]. JOURNAL OF INTEGRATIVE AGRICULTURE, 21(12), 3445–3455. https://doi.org/10.1016/j.jia.2022.08.050

Wu, Z., Dou, J., Nguyen, K.-U., Eppley, J. C., Siwawannapong, K., Zhang, Y., & Lindsey, J. S. (2022). Tailoring the AIE Chromogen 2-(2-Hydroxyphenyl)benzothiazole for Use in Enzyme-Triggered Molecular Brachytherapy. MOLECULES, 27(24). https://doi.org/10.3390/molecules27248682

Sun, R., Liu, M., Wang, P., Qin, Y., Schnedermann, C., Maher, A. G., … Nocera, D. G. (2022). Syntheses and Properties of Metalated Tetradehydrocorrins. INORGANIC CHEMISTRY, 61(31), 12308–12317. https://doi.org/10.1021/acs.inorgchem.2c01642

Heine, A. J., Walker, T. D., Jett, J. B., Isik, F., & McKeand, S. E. (2022, December 14). Pollination Bag Type Affects Ovule Development and Seed Yields in Pinus taeda L. FOREST SCIENCE, Vol. 12. https://doi.org/10.1093/forsci/fxac052

Magdaong, N. C. M., Jing, H., Diers, J. R., Kirmaier, C., Lindsey, J. S., Bocian, D. F., & Holten, D. (2022). Probing the Effects of Electronic-Vibrational Resonance on the Rate of Excited-State Energy Transfer in Bacteriochlorin Dyads. JOURNAL OF PHYSICAL CHEMISTRY LETTERS, 13(34), 7906–7910. https://doi.org/10.1021/acs.jpclett.2c02154

Roy, A., Magdaong, N. C. M., Jing, H., Rong, J., Diers, J. R., Kang, H. S., … Holten, D. (2022, December 12). Balancing Panchromatic Absorption and Multistep Charge Separation in a Compact Molecular Architecture br. JOURNAL OF PHYSICAL CHEMISTRY A, Vol. 12. https://doi.org/10.1021/acs.jpca.2c06040

Karg, C. A., Taniguchi, M., Lindsey, J. S., & Moser, S. (2022, December 8). Phyllobilins - Bioactive Natural Products Derived from Chlorophyll - Plant Origins, Structures, Absorption Spectra, and Biomedical Properties. PLANTA MEDICA, Vol. 12. https://doi.org/10.1055/a-1955-4624

McLaughlin, A. A., Hanley-Bowdoin, L., Kennedy, G. G., & Jacobson, A. L. (2022). Vector acquisition and co-inoculation of two plant viruses influences transmission, infection, and replication in new hosts. SCIENTIFIC REPORTS, 12(1). https://doi.org/10.1038/s41598-022-24880-5

Cosco, N. G. G., Wells, N. M. M., Zhang, D., Goodell, L. S., Monsur, M., Xu, T., & Moore, R. C. C. (2022). Hands-on childcare garden intervention: A randomized controlled trial to assess effects on fruit and vegetable identification, liking, and consumption among children aged 3-5 years in North Carolina. FRONTIERS IN PSYCHOLOGY, 13. https://doi.org/10.3389/fpsyg.2022.993637

Bray, J., Eward, W., & Breen, M. (2022, November 25). Evaluating the relevance of surgical margins. Part one: The problems with current methodology. VETERINARY AND COMPARATIVE ONCOLOGY. https://doi.org/10.1111/vco.12865

Hu, C.-H., Govers, F., Carbone, I., & Ristaino, J. B. (2022, November 5). Gene Flow of Phytophthora infestans Between Refuse Piles, and Organic and Conventional Potato Fields in Southern Flevoland, The Netherlands. POTATO RESEARCH, Vol. 11. https://doi.org/10.1007/s11540-022-09597-2

Zhao, Y., Guo, Q., Cao, S., Tian, Y., Han, K., Sun, Y., … Li, Y. (2022). Genome-wide identification of the AlkB homologs gene family, PagALKBH9B and PagALKBH10B regulated salt stress response in Populus. FRONTIERS IN PLANT SCIENCE, 13. https://doi.org/10.3389/fpls.2022.994154

Liu, R., Rong, J., Wu, Z., Taniguchi, M., Bocian, D. F., Holten, D., & Lindsey, J. S. (2022). Panchromatic Absorbers Tethered for Bioconjugation or Surface Attachment. MOLECULES, 27(19). https://doi.org/10.3390/molecules27196501

Juhasz, N. B., Wilson, J. M., Haney, K. N., Clark, M. H., Davenport, A. C., Breitschwerdt, E. B., & Qurollo, B. A. (2022). Rickettsia typhi infection in a clinically-ill dog from Houston, Texas. VETERINARY PARASITOLOGY- REGIONAL STUDIES AND REPORTS, 35. https://doi.org/10.1016/j.vprsr.2022.100781

Shalizi, M. N., Payn, K. G., Walker, T. D., Isik, F., Heine, A. J., & McKeand, S. E. (2022). Long-term evaluation of intra- and inter-provenance hybrids of loblolly pine in the Piedmont region of the southeastern United States. FOREST ECOLOGY AND MANAGEMENT, 522. https://doi.org/10.1016/j.foreco.2022.120469

Camire, A. C., Nathaniel S. O'Bier, Patel, D. T., Cramer, N. A., Straubinger, R. K., Breitschwerdt, E. B., … Marconi, R. T. (2022, September 14). FtlA and FtlB Are Candidates for Inclusion in a Next-Generation Multiantigen Subunit Vaccine for Lyme Disease. INFECTION AND IMMUNITY, Vol. 9. https://doi.org/10.1128/iai.00364-22

Li, X., Cai, K., Zhang, Q., Pei, X., Chen, S., Jiang, L., … Zhao, X. (2022). The Manchurian Walnut Genome: Insights into Juglone and Lipid Biosynthesis. GIGASCIENCE, 11. https://doi.org/10.1093/gigascience/giac057

Smith, W. A., Matsuba, Y., & Dewey, R. E. (2022). Knockout of a key gene of the nicotine biosynthetic pathway severely affects tobacco growth under field, but not greenhouse conditions. BMC RESEARCH NOTES, 15(1). https://doi.org/10.1186/s13104-022-06188-9

Smolar, A. L. O., Breitschwerdt, E. B., Phillips, P. H., Newman, N. J., & Biousse, V. (2022). Cat scratch disease: What to do with the cat? American Journal of Ophthalmology Case Reports. https://doi.org/10.1016/j.ajoc.2022.101702

Taniguchi, M., Taniguchi, M., Zhang, R., Goto, R., & Lindsey, J. S. (2022). Chasing the green echiuran worm Bonellia in tidal pools of Okinawa. FRONTIERS IN BIOLOGICAL DETECTION: FROM NANOSENSORS TO SYSTEMS XIV, Vol. 11979. https://doi.org/10.1117/12.2608722

Krane, G. A., Shockley, K. R., Malarkey, D. E., Miller, A. D., Miller, C. R., Tokarz, D. A., … Mariani, C. L. (2022, July 30). Inter-pathologist agreement on diagnosis, classification and grading of canine glioma. VETERINARY AND COMPARATIVE ONCOLOGY. https://doi.org/10.1111/vco.12853

Sohail, M., Pirzada, T., Opperman, C. H., & Khan, S. A. (2022, July 13). Recent advances in seed coating technologies: transitioning toward sustainable agriculture. GREEN CHEMISTRY. https://doi.org/10.1039/d2gc02389j

Wcisel, D. J., Dornburg, A., McConnell, S. C., Hernandez, K. M., Andrade, J., Jong, J. L. O., … Yoder, J. A. (2022, July 23). A highly diverse set of novel immunoglobulin-like transcript (NILT) genes in zebrafish indicates a wide range of functions with complex relationships to mammalian receptors. IMMUNOGENETICS. https://doi.org/10.1007/s00251-022-01270-9

Kidd, L., Hamilton, H., Stine, L., Qurollo, B., & Breitschwerdt, E. B. (2022, July 11). Vector-borne disease and its relationship to hematologic abnormalities and microalbuminuria in retired racing and show-bred greyhounds. JOURNAL OF VETERINARY INTERNAL MEDICINE, Vol. 7. https://doi.org/10.1111/jvim.16477

Siwawannapong, K., Nemeth, A. M., Melander, R. J., Rong, J., Davis, J. R., Taniguchi, M., … Melander, C. (2022, July 8). Simple Dipyrrin Analogues of Prodigiosin for Use as Colistin Adjuvants. CHEMMEDCHEM, Vol. 7. https://doi.org/10.1002/cmdc.202200286

Taniguchi, M., Bocian, D. F., Holten, D., & Lindsey, J. S. (2022). Beyond green with synthetic chlorophylls - Connecting structural features with spectral properties. JOURNAL OF PHOTOCHEMISTRY AND PHOTOBIOLOGY C-PHOTOCHEMISTRY REVIEWS, 52. https://doi.org/10.1016/j.jphotochemrev.2022.100513

Tang, X., Wang, C., Chai, G., Wang, D., Xu, H., Liu, Y., … Zhou, G. (2022, June 15). Ubiquitinated DA1 negatively regulates vascular cambium activity through modulating the stability of WOX4 in Populus. PLANT CELL. https://doi.org/10.1093/plcell/koac178

Wang, S., Pirzada, T., Xie, W., Barbieri, E., Hossain, O., Opperman, C. H., … Khan, S. A. (2022). Creating hierarchically porous banana paper-metal organic framework (MOF) composites with multifunctionality. APPLIED MATERIALS TODAY, 28. https://doi.org/10.1016/j.apmt.2022.101517

Thomas, A., Tilotta, D. C., Frampton, J., & Jetton, R. M. (2022). Sesquiterpene Induction by the Balsam Woolly Adelgid (Adelges piceae) in Putatively Resistant Fraser Fir (Abies fraseri). FORESTS, 13(5). https://doi.org/10.3390/f13050716

Huang, X., Wang, W., Gong, T., Wickell, D., Kuo, L.-Y., Zhang, X., … Li, Q. (2022, May 9). The flying spider-monkey tree fern genome provides insights into fern evolution and arborescence. NATURE PLANTS. https://doi.org/10.1038/s41477-022-01146-6

Carlson, K. B., Wcisel, D. J., Ackerman, H. D., Romanet, J., Christiansen, E. F., Niemuth, J. N., … Yoder, J. A. (2022, April 28). Transcriptome annotation reveals minimal immunogenetic diversity among Wyoming toads, Anaxyrus baxteri. CONSERVATION GENETICS. https://doi.org/10.1007/s10592-022-01444-8

Jing, H., Rong, J., Taniguchi, M., & Lindsey, J. S. (2022). [Review of Phenylene-linked tetrapyrrole arrays containing free base and diverse metal chelate forms - Versatile synthetic architectures for catalysis and artificial photosynthesis]. COORDINATION CHEMISTRY REVIEWS, 456. https://doi.org/10.1016/j.ccr.2021.214278

Noar, R. D., Thomas, E., & Daub, M. E. (2022). [Review of Genetic Characteristics and Metabolic Interactions between Pseudocercospora fijiensis and Banana: Progress toward Controlling Black Sigatoka]. PLANTS-BASEL, 11(7). https://doi.org/10.3390/plants11070948

Li, X., Cai, K., Han, Z., Zhang, S., Sun, A., Xie, Y., … Zhao, X. (2022). Chromosome-Level Genome Assembly for Acer pseudosieboldianum and Highlights to Mechanisms for Leaf Color and Shape Change. FRONTIERS IN PLANT SCIENCE, 13. https://doi.org/10.3389/fpls.2022.850054

Nowicki, M., Hadziabdic, D., Trigiano, R. N., Runge, F., Thines, M., Boggess, S. L., … Spring, O. (2022). Microsatellite Markers from Peronospora tabacina, the Cause of Blue Mold of Tobacco, Reveal Species Origin, Population Structure, and High Gene Flow. PHYTOPATHOLOGY, 112(2), 422–434. https://doi.org/10.1094/PHYTO-03-21-0092-R

Jing, H., Liu, S., Jiang, J., Tran, V.-P., Rong, J., Wang, P., & Lindsey, J. S. (2022). Meso bromination and derivatization of synthetic bacteriochlorins. NEW JOURNAL OF CHEMISTRY, 46(12), 5556–5572. https://doi.org/10.1039/d1nj05853c

Peng, Y., Dallas, M. M., Ascencio-Ibanez, J. T., Hoyer, J. S., Legg, J., Hanley-Bowdoin, L., … Yin, H. (2022). Early detection of plant virus infection using multispectral imaging and spatial-spectral machine learning. SCIENTIFIC REPORTS, 12(1). https://doi.org/10.1038/s41598-022-06372-8

Ochola, J., Cortada, L., Mwaura, O., Tariku, M., Christensen, S. A., Ng'ang'a, M., … Torto, B. (2022, February 28). Wrap-and-plant technology to manage sustainably potato cyst nematodes in East Africa. NATURE SUSTAINABILITY. https://doi.org/10.1038/s41893-022-00852-5

Bovet, L., Campanoni, P., Lu, J., Hilfiker, A., Kleinhans, S., Laparra, H., … Goepfert, S. (2022). CLCNt2 Mediates Nitrate Content in Tobacco Leaf, Impacting the Production of Tobacco-Specific Nitrosamines in Cured Leaves. FRONTIERS IN PLANT SCIENCE, 13. https://doi.org/10.3389/fpls.2022.741078

Jing, H., Wang, P., Chen, B., Jiang, J., Vairaprakash, P., Liu, S., … Lindsey, J. S. (2022, March 2). Synthesis of bacteriochlorins bearing diverse beta-substituents. NEW JOURNAL OF CHEMISTRY, Vol. 3. https://doi.org/10.1039/d1nj05852e

Andre, M. R., Neupane, P., Lappin, M., Herrin, B., Smith, V., Williams, T. I., … Breitschwerdt, E. B. (2022). Using Proteomic Approaches to Unravel the Response of Ctenocephalides felis felis to Blood Feeding and Infection With Bartonella henselae. FRONTIERS IN CELLULAR AND INFECTION MICROBIOLOGY, 12. https://doi.org/10.3389/fcimb.2022.828082

Aimone, C. D., Hoyer, J. S., Dye, A. E., Deppong, D. O., Duffy, S., Carbone, I., & Hanley-Bowdoin, L. (2022). An experimental strategy for preparing circular ssDNA virus genomes for next-generation sequencing. JOURNAL OF VIROLOGICAL METHODS, 300. https://doi.org/10.1016/j.jviromet.2021.114405

Li, X., Cai, K., Zhao, Q., Li, H., Wang, X., Tigabu, M., … Zhao, X. (2022). Morphological and Comparative Transcriptome Analysis of Three Species of Five-Needle Pines: Insights Into Phenotypic Evolution and Phylogeny. FRONTIERS IN PLANT SCIENCE, 13. https://doi.org/10.3389/fpls.2022.795631

Neupane, P., Maggi, R. G., Basnet, M., Lashnits, E., Andrews, G. P., & Breitschwerdt, E. B. (2022). Bartonella henselae Recombinant Pap31 for the Diagnosis of Canine and Human Bartonelloses. PATHOGENS, 11(2). https://doi.org/10.3390/pathogens11020182

Alvarez-Fernandez, A., Maggi, R., Eduard Martin-Valls, G., Baxarias, M., Bealmear Breitschwerdt, E., & Solano-Gallego, L. (2022). Prospective serological and molecular cross-sectional study focusing on Bartonella and other blood-borne organisms in cats from Catalonia (Spain). PARASITES & VECTORS, 15(1). https://doi.org/10.1186/s13071-021-05105-6