Genomic Sciences - 2011 Grenet, B., Kaltofen, E. L., Koiran, P., & Portier, N. (2011). Symmetric determinantal representation of weakly skew circuits. In C. Dürr & T. Schwentick (Eds.), Proceedings of the Symposium on Theoretical Aspects of Computer Science (STACS 2011) (pp. 543–554). Germany. Alföldi, J., Di Palma, F., Grabherr, M., Williams, C., Kong, L., Mauceli, E., … Lindblad-Toh, K. (2011). The genome of the green anole lizard and a comparative analysis with birds and mammals. Nature, 477(7366), 587–591. https://doi.org/10.1038/nature10390 VanderHeyden, T., Jr., Fimmel, C., Breitschwerdt, E., Parada, J., Yong, S., & Mihalik, A. (2011). A case of granulomatous hepatitis due to bartonella henselae infection. American Journal of Gastroenterology, 106, S280. Hutchins, R. G., Breitschwerdt, E. B., Cullen, J. M., Bissett, S. A., & Gookin, J. L. (2011). The role of infectious agents in granulomatous hepatitis in dogs. Journal of Veterinary Internal Medicine, 25(3), 704. Perez, C., Diniz, P. P. V. P., Maggi, R. G., & Breitschwerdt, E. B. (2011). Canine bartonellosis mimics other tick-borne diseases. Journal of Veterinary Internal Medicine, 25(3), 706–707. Beall, M. J., Andrews, B., Eberts, M., & Breitschwerdt, E. B. (2011). Canine granulocytic anaplasmosis and granulocytic ehrlichiosis - a field-based comparison. Journal of Veterinary Internal Medicine, 25(3), 712. Beall, M. J., Breitschwerdt, E. B., Cohn, L. A., Couto, G., Dryden, M., Eddlestone, S., … Yabsley, M. (2011). Seroprevalence of three ehrlichia species in dogs - a multi-institutional study. Journal of Veterinary Internal Medicine, 25(3), 748. Weese, J. S., Blondeau, J. M., Boothe, D., Breitschwerdt, E. B., Guardabassi, L., Hillier, A., … Sykes, J. E. (2011). Antimicrobial Use Guidelines for Treatment of Urinary Tract Disease in Dogs and Cats: Antimicrobial Guidelines Working Group of the International Society for Companion Animal Infectious Diseases. Veterinary Medicine International, 2011, 1–9. https://doi.org/10.4061/2011/263768 Pérez, C., Maggi, R. G., Diniz, P. P. V. P., & Breitschwerdt, E. B. (2011). Molecular and Serological Diagnosis of Bartonella Infection in 61 Dogs from the United States. Journal of Veterinary Internal Medicine, 25(4), 805–810. https://doi.org/10.1111/j.1939-1676.2011.0736.x Breitschwerdt, E. B., Hegarty, B. C., Maggi, R. G., Lantos, P. M., Aslett, D. M., & Bradley, J. M. (2011). Rickettsia rickettsiiTransmission by a Lone Star Tick, North Carolina. Emerging Infectious Diseases, 17(5), 873–875. https://doi.org/10.3201/eid1705.101530 Varanat, M., Broadhurst, J., Linder, K. E., Maggi, R. G., & Breitschwerdt, E. B. (2011). Identification of Bartonella henselae in 2 Cats With Pyogranulomatous Myocarditis and Diaphragmatic Myositis. Veterinary Pathology, 49(4), 608–611. https://doi.org/10.1177/0300985811404709 Cabrera, A. R., Donohue, K. V., Khalil, S. M. S., Scholl, E., Opperman, C., Sonenshine, D. E., & Roe, R. M. (2011). New approach for the study of mite reproduction: The first transcriptome analysis of a mite, Phytoseiulus persimilis (Acari: Phytoseiidae). Journal of Insect Physiology, 57(1), 52–61. https://doi.org/10.1016/j.jinsphys.2010.09.006 Zwarts, L., Magwire, M. M., Carbone, M. A., Versteven, M., Herteleer, L., Anholt, R. R. H., … Mackay, T. F. C. (2011). Complex genetic architecture of Drosophila aggressive behavior. Proceedings of the National Academy of Sciences, 108(41), 17070–17075. https://doi.org/10.1073/pnas.1113877108 Gaddameedhi, S., Selby, C. P., Kaufmann, W. K., Smart, R. C., & Sancar, A. (2011). Control of skin cancer by the circadian rhythm. Proceedings of the National Academy of Sciences, 108(46), 18790–18795. https://doi.org/10.1073/pnas.1115249108 Stock, S. P., Bird, D. M. K., Ghedin, E., & Goodrich-Blair, H. (2011). Abstracts of NEMASYM: The Third Nematode-Bacteria Symbioses Research Coordination Network Meeting. Symbiosis, 55(3), 97–109. https://doi.org/10.1007/s13199-011-0135-1 Nelson, E. C., & Ristaino, J. B. (2011). The Potato Late Blight pathogen in Ireland, 1846: reconnecting Irish specimens with the Moore--Berkeley correspondence. Archives of Natural History, 38(2), 356–359. Ristaino, J. B. (2011). A LUCID Key to the common Phytophthora species. PHYTOPATHOLOGY, 101(6), S153–S153. Ristaino, J. B. (2011). Key for identification of common Phytophthora species. CD-Rom Format. American Phytopathological Society. Ristaino, J. B., Ivors, K., Meneses, M. B., Rueda, D. E., & Bonants, P. (2011). Deployment of rapid diagnostic tools for Phytophthora on horticultural crops in Central America. APS-IPPC Joint Meeting" Emerging Pests/Invasive Species. Digital Identification Tools: Their role in Biosecurity and Pest-Management", Honolulu, Hawaii, USA. Robideau, G. P., Cock, A. W. A. M., Coffey, M. D., Voglmayr, H., Brouwer, H., Bala, K., … others. (2011). DNA barcoding of oomycetes with cytochrome c oxidase subunit I and internal transcribed spacer. Molecular Ecology Resources, 11(6), 1002–1011. DNA barcoding of oomycetes with cytochrome c oxidase subunit I and internal transcribed spacer. (2011). Molecular Ecology Resources, 11(6), 1002–1011. https://doi.org/10.1111/j.1755-0998.2011.03041.x Kaltofen, E. L., Nehring, M., & Saunders, B. D. (2011). Quadratic-time certificates in linear algebra. Proceedings of the 36th international symposium on Symbolic and algebraic computation - ISSAC '11. Presented at the the 36th international symposium. https://doi.org/10.1145/1993886.1993915 Kaltofen, E. L., & Nehring, M. (2011). Supersparse black box rational function interpolation. Proceedings of the 36th international symposium on Symbolic and algebraic computation - ISSAC '11. Presented at the the 36th international symposium. https://doi.org/10.1145/1993886.1993916 Kaltofen, E. L., Lee, W.-shin, & Yang, Z. (2011). Fast estimates of Hankel matrix condition numbers and numeric sparse interpolation. Proceedings of the 2011 International Workshop on Symbolic-Numeric Computation - SNC '11. Presented at the the 2011 International Workshop. https://doi.org/10.1145/2331684.2331704 Grenet, B., Kaltofen, E., Koiran, P., & Portier, N. (2011). Symmetric determinantal representation of formulas and weakly skew circuits. https://doi.org/10.1090/conm/556/11008 Kaltofen, E. L. (2011). The “Seven Dwarfs” of Symbolic Computation. In Texts & Monographs in Symbolic Computation (pp. 95–104). https://doi.org/10.1007/978-3-7091-0794-2_5 Chakraborty, S., & Zeng, Z. B. (2011). QTL Mapping for Days to Flowering under Drought Condition in Rice (Oryza sativa L.) Genome. Notulae Botanicae Horti Agrobotanici Cluj-Napoca, 39(1), 58. https://doi.org/10.15835/nbha3915610 Maggi, R. G., Mascarelli, P. E., Pultorak, E. L., Hegarty, B. C., Bradley, J. M., Mozayeni, B. R., & Breitschwerdt, E. B. (2011). Bartonella spp. bacteremia in high-risk immunocompetent patients. Diagnostic Microbiology and Infectious Disease, 71(4), 430–437. https://doi.org/10.1016/j.diagmicrobio.2011.09.001 Sherrill, J. R., Bullock, B. P., Mullin, T. J., McKeand, S. E., & Purnell, R. C. (2011). Total and merchantable stem volume equations for midrotation loblolly pine (Pinus taeda L.). Southern Journal of Applied Forestry, 35(3), 105–108. Katz, L. A., DeBerardinis, J., Hall, M. S., Kovner, A. M., Dunthorn, M., & Muse, S. V. (2011). Heterogeneous Rates of Molecular Evolution Among Cryptic Species of the Ciliate Morphospecies Chilodonella uncinata. JOURNAL OF MOLECULAR EVOLUTION, 73(5-6), 266–272. https://doi.org/10.1007/s00239-011-9468-x Lindsey, J. S., Thamyongkit, P., Taniguchi, M., & Bocian, D. F. (2011). Encoding isotopic watermarks in molecular electronic materials as an anti-counterfeiting strategy. Application to porphyrins for information storage. JOURNAL OF PORPHYRINS AND PHTHALOCYANINES, 15(7-8), 505–516. https://doi.org/10.1142/s1088424611003458 Cumbie, W. P., Isik, F., Li, B., & Goldfarb, B. (2011). Effects of propagule type on genetic parameters of wood density and growth in a loblolly pine progeny test at ages 10 and 11 years. TREE GENETICS & GENOMES, 7(6), 1147–1158. https://doi.org/10.1007/s11295-011-0402-6 Dorshorst, B., Molin, A.-M., Rubin, C.-J., Johansson, A. M., Stromstedt, L., Pham, M.-H., … Andersson, L. (2011). A Complex Genomic Rearrangement Involving the Endothelin 3 Locus Causes Dermal Hyperpigmentation in the Chicken. PLOS GENETICS, 7(12). https://doi.org/10.1371/journal.pgen.1002412 Kaddurah-Daouk, R., Baillie, R. A., Zhu, H., Zeng, Z.-B., Wiest, M. M., Nguyen, U. T., … Krauss, R. M. (2011). Enteric Microbiome Metabolites Correlate with Response to Simvastatin Treatment. PLOS ONE, 6(10). https://doi.org/10.1371/journal.pone.0025482 Shen, Q., Liu, Z., Song, F., Xie, Q., Hanley-Bowdoin, L., & Zhou, X. (2011). Tomato SlSnRK1 Protein Interacts with and Phosphorylates beta C1, a Pathogenesis Protein Encoded by a Geminivirus beta-Satellite. PLANT PHYSIOLOGY, 157(3), 1394–1406. https://doi.org/10.1104/pp.111.184648 Davies, K. G., Rowe, J., Manzanilla-Lopez, R., & Opperman, C. H. (2011). Re-evaluation of the life-cycle of the nematode-parasitic bacterium Pasteuria penetrans in root-knot nematodes, Meloidogyne spp. NEMATOLOGY, 13, 825–835. https://doi.org/10.1163/138855410x552670 De Vries, B. D., Fehr, W. R., Welke, G. A., & Dewey, R. E. (2011). Molecular Analysis of Mutant Alleles for Elevated Palmitate Concentration in Soybean. CROP SCIENCE, 51(6), 2554–2560. https://doi.org/10.2135/cropsci2011.03.0156 Chen, H.-C., Li, Q., Shuford, C. M., Liu, J., Muddiman, D. C., Sederoff, R. R., & Chiang, V. L. (2011). Membrane protein complexes catalyze both 4-and 3-hydroxylation of cinnamic acid derivatives in monolignol biosynthesis. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 108(52), 21253–21258. https://doi.org/10.1073/pnas.1116416109 Sanchez-Duran, M. A., Dallas, M. B., Ascencio-Ibanez, J. T., Reyes, M. I., Arroyo-Mateos, M., Ruiz-Albert, J., … Bejarano, E. R. (2011). Interaction between Geminivirus Replication Protein and the SUMO-Conjugating Enzyme Is Required for Viral Infection. JOURNAL OF VIROLOGY, 85(19), 9789–9800. https://doi.org/10.1128/jvi.02566-10 Robideau, G. P., Cock, A. W. A. M., Coffey, M. D., Voglmayr, H., Brouwer, H., Bala, K., … Zhang, Y. H. (2011). DNA barcoding of oomycetes with cytochrome c oxidase subunit I and internal transcribed spacer. Molecular Ecology Resources, 11(6), 1002–1011. Becker, S. E. D., Thomas, R., Trifonov, V. A., Wayne, R. K., Graphodatsky, A. S., & Breen, M. (2011). Anchoring the dog to its relatives reveals new evolutionary breakpoints across 11 species of the Canidae and provides new clues for the role of B chromosomes. CHROMOSOME RESEARCH, 19(6), 685–708. https://doi.org/10.1007/s10577-011-9233-4 Taniguchi, M., Du, H., & Lindsey, J. S. (2011). Virtual Libraries of Tetrapyrrole Macrocycles. Combinatorics, Isomers, Product Distributions, and Data Mining. JOURNAL OF CHEMICAL INFORMATION AND MODELING, 51(9), 2233–2247. https://doi.org/10.1021/ci200240e Eberts, M. D., Diniz, P. P. V. de P., Beall, M. J., Stillman, B. A., Chandrashekar, R., & Breitschwerdt, E. B. (2011). Typical and Atypical Manifestations of Anaplasma phagocytophilum Infection in Dogs. JOURNAL OF THE AMERICAN ANIMAL HOSPITAL ASSOCIATION, 47(6), E86–E94. https://doi.org/10.5326/jaaha-ms-5578 Newton, L., Frampton, J., Monahan, J., Goldfarb, B., & Hain, F. (2011). Two novel techniques to screen Abies seedlings for resistance to the balsam woolly adelgid, Adelges piceae. Journal of Insect Science (Tucson, AZ), 11. Nelson, E. C., & Ristaino, J. B. (2011, October). The Potato Late Blight pathogen in Ireland, 1846: reconnecting Irish specimens with the Moore-Berkeley correspondence. ARCHIVES OF NATURAL HISTORY, Vol. 38, pp. 356–359. https://doi.org/10.3366/anh.2011.0042 Zhang, Y., Wheatley, R., Fulkerson, E., Tapp, A., & Estes, P. A. (2011). Mastermind mutations generate a unique constellation of midline cells within the drosophila CNS. PLoS One, 6(10). Spears, P. A., Suyemoto, M. M., Hamrick, T. S., Wolf, R. L., Havell, E. A., & Orndorff, P. E. (2011). In Vitro Properties of a Listeria monocytogenes Bacteriophage-Resistant Mutant Predict Its Efficacy as a Live Oral Vaccine Strain. INFECTION AND IMMUNITY, 79(12), 5001–5009. https://doi.org/10.1128/iai.05700-11 Wendelsdorf, K., Dean, G., Hu, S., Nordone, S., & Banks, H. T. (2011). Host immune responses that promote initial HIV spread. JOURNAL OF THEORETICAL BIOLOGY, 289, 17–35. https://doi.org/10.1016/j.jtbi.2011.08.012 Cherry, N. A., Maggi, R. G., Rossmeisl, J. H., Hegarty, B. C., & Breitschwerdt, E. B. (2011). Ecological Diversity ofBartonellaSpecies Infection Among Dogs and Their Owner in Virginia. Vector-Borne and Zoonotic Diseases, 11(11), 1425–1432. https://doi.org/10.1089/vbz.2010.0201 Mass, O., Pandithavidana, D. R., Ptaszek, M., Santiago, K., Springer, J. W., Jiao, J., … Lindsey, J. S. (2011). De novo synthesis and properties of analogues of the self-assembling chlorosomal bacteriochlorophylls. New Journal of Chemistry, 35(11), 2671. https://doi.org/10.1039/c1nj20611g Angstadt, A. Y., Motsinger-Reif, A., Thomas, R., Kisseberth, W. C., Couto, C. G., Duval, D. L., … Breen, M. (2011). Characterization of Canine Osteosarcoma by Array Comparative Genomic Hybridization and RT-qPCR: Signatures of Genomic Imbalance in Canine Osteosarcoma Parallel the Human Counterpart. GENES CHROMOSOMES & CANCER, 50(11), 859–874. https://doi.org/10.1002/gcc.20908 Stoeker, L., Nordone, S., Gunderson, S., Zhang, L., Kajikawa, A., LaVoy, A., … Dean, G. A. (2011). Assessment of Lactobacillus gasseri as a Candidate Oral Vaccine Vector. CLINICAL AND VACCINE IMMUNOLOGY, 18(11), 1834–1844. https://doi.org/10.1128/cvi.05277-11 Mass, O., & Lindsey, J. S. (2011). A trans-AB-Bacteriochlorin Building Block. JOURNAL OF ORGANIC CHEMISTRY, 76(22), 9478–9487. https://doi.org/10.1021/jo201967k Yang, E., Kirmaier, C., Krayer, M., Taniguchi, M., Kim, H.-J., Diers, J. R., … Holten, D. (2011). Photophysical Properties and Electronic Structure of Stable, Tunable Synthetic Bacteriochlorins: Extending the Features of Native Photosynthetic Pigments. JOURNAL OF PHYSICAL CHEMISTRY B, 115(37), 10801–10816. https://doi.org/10.1021/jp205258s Schipper, J. L., MacKenzie, S. H., Sharma, A., & Clark, A. C. (2011). A bifunctional allosteric site in the dimer interface of procaspase-3. BIOPHYSICAL CHEMISTRY, 159(1), 100–109. https://doi.org/10.1016/j.bpc.2011.05.013 McFerrin, L. G., & Atchley, W. R. (2011). Evolution of the Max and Mlx Networks in Animals. GENOME BIOLOGY AND EVOLUTION, 3, 915–937. https://doi.org/10.1093/gbe/evr082 Mascarelli, P. E., Iredell, J. R., Maggi, R. G., Weinberg, G., & Breitschwerdt, E. B. (2011). Bartonella Species Bacteremia in Two Patients with Epithelioid Hemangioendothelioma. Journal of Clinical Microbiology, 49(11), 4006–4012. https://doi.org/10.1128/jcm.05527-11 Tzeng, J.-Y., Zhang, D., Pongpanich, M., Smith, C., McCarthy, M. I., Sale, M. M., … Sullivan, P. F. (2011). Studying Gene and Gene-Environment Effects of Uncommon and Common Variants on Continuous Traits: A Marker-Set Approach Using Gene-Trait Similarity Regression. AMERICAN JOURNAL OF HUMAN GENETICS, 89(2), 277–288. https://doi.org/10.1016/j.ajhg.2011.07.007 Lindsey, J. S., & Bocian, D. F. (2011). [Review of Molecules for Charge-Based Information Storage]. ACCOUNTS OF CHEMICAL RESEARCH, 44(8), 638–650. https://doi.org/10.1021/ar200107x Scott, M. C., Sarver, A. L., Gavin, K. J., Thayanithy, V., Getzy, D. M., Newman, R. A., … Modiano, J. F. (2011). Molecular subtypes of osteosarcoma identified by reducing tumor heterogeneity through an interspecies comparative approach. BONE, 49(3), 356–367. https://doi.org/10.1016/j.bone.2011.05.008 Breitschwerdt, E. B., Mascarelli, P. E., Schweickert, L. A., Maggi, R. G., Hegarty, B. C., Bradley, J. M., & Woods, C. W. (2011). Hallucinations, Sensory Neuropathy, and Peripheral Visual Deficits in a Young Woman Infected with Bartonella koehlerae. Journal of Clinical Microbiology, 49(9), 3415–3417. https://doi.org/10.1128/jcm.00833-11 Aspinwall, M. J., King, J. S., Booker, F. L., & McKeand, S. E. (2011). Genetic effects on total phenolics, condensed tannins and non-structural carbohydrates in loblolly pine (Pinus taeda L.) needles. TREE PHYSIOLOGY, 31(8), 831–842. https://doi.org/10.1093/treephys/tpr073 Oh, M.-H., Sun, J., Oh, D. H., Zielinski, R. E., Clouse, S. D., & Huber, S. C. (2011). Enhancing Arabidopsis Leaf Growth by Engineering the BRASSINOSTEROID INSENSITIVE1 Receptor Kinase. PLANT PHYSIOLOGY, 157(1), 120–131. https://doi.org/10.1104/pp.111.182741 Kajikawa, A., Nordone, S. K., Zhang, L., Stoeker, L. L., LaVoy, A. S., Klaenhammer, T. R., & Dean, G. A. (2011). Dissimilar Properties of Two Recombinant Lactobacillus acidophilus Strains Displaying Salmonella FliC with Different Anchoring Motifs. APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 77(18), 6587–6596. https://doi.org/10.1128/aem.05153-11 Thudi, N. K., Shu, S. T., Martin, C. K., Lanigan, L. G., Nadella, M. V. P., Van Bokhoven, A., … Rosol, T. J. (2011). Development of a Brain Metastatic Canine Prostate Cancer Cell Line. PROSTATE, 71(12), 1251–1263. https://doi.org/10.1002/pros.21341 Deterding, L. J., Williams, J. G., Humble, M. M., Petrovich, R. M., Wei, S.-J., Trempus, C. S., … Tomer, K. B. (2011). CD34 antigen: Determination of specific sites of phosphorylation in vitro and in vivo. INTERNATIONAL JOURNAL OF MASS SPECTROMETRY, 301(1-3), 12–21. https://doi.org/10.1016/j.ijms.2010.05.027 Zhang, M., Tsiatis, A. A., Davidian, M., Pieper, K. S., & Mahaffey, K. W. (2011). Inference on treatment effects from a randomized clinical trial in the presence of premature treatment discontinuation: the SYNERGY trial. BIOSTATISTICS, 12(2), 258–269. https://doi.org/10.1093/biostatistics/kxq054 Aspinwall, M. J., King, J. S., McKeand, S. E., & Bullock, B. P. (2011). Genetic effects on stand-level uniformity and above- and belowground dry mass production in juvenile loblolly pine. FOREST ECOLOGY AND MANAGEMENT, 262(4), 609–619. https://doi.org/10.1016/j.foreco.2011.04.029 de Caprariis, D., Dantas-Torres, F., Capelli, G., Mencke, N., Stanneck, D., Breitschwerdt, E. B., & Otranto, D. (2011). Evolution of clinical, haematological and biochemical findings in young dogs naturally infected by vector-borne pathogens. Veterinary Microbiology, 149(1-2), 206–212. https://doi.org/10.1016/j.vetmic.2010.10.006 Samberg, M. E., Orndorff, P. E., & Monteiro-Riviere, N. A. (2011). Antibacterial efficacy of silver nanoparticles of different sizes, surface conditions and synthesis methods. NANOTOXICOLOGY, 5(2), 244–253. https://doi.org/10.3109/17435390.2010.525669 Diniz, P. P. V. P., Schulz, B. S., Hartmann, K., & Breitschwerdt, E. B. (2011). "Candidatus Neoehrlichia mikurensis" Infection in a Dog from Germany. Journal of Clinical Microbiology, 49(5), 2059–2062. https://doi.org/10.1128/jcm.02327-10 Smith, K. M., Nanda, K., Spears, C. J., Ribeiro, M., Vancini, R., Piper, A., … Hernandez, R. (2011). Structural mutants of dengue virus 2 transmembrane domains exhibit host-range phenotype. VIROLOGY JOURNAL, 8. https://doi.org/10.1186/1743-422x-8-289 Breitschwerdt, E. B., Hegarty, B. C., Maggi, R. G., Lantos, P. M., Aslett, D. M., & Bradley, J. M. (2011). Rickettsia rickettsii transmission by a lone star tick, North Carolina. Emerging Infectious Diseases, 17(5), 873–875. Dalzell, J. J., McVeigh, P., Warnock, N. D., Mitreva, M., Bird, D. M. K., Abad, P., … Maule, A. G. (2011). RNAi Effector Diversity in Nematodes. PLOS NEGLECTED TROPICAL DISEASES, 5(6). https://doi.org/10.1371/journal.pntd.0001176 Ming, M., Feng, L., Shea, C. R., Soltani, K., Zhao, B., Han, W., … He, Y.-Y. (2011). PTEN Positively Regulates UVB-Induced DNA Damage Repair. CANCER RESEARCH, 71(15), 5287–5295. https://doi.org/10.1158/0008-5472.can-10-4614 De Vries, B. D., Fehr, W. R., Welke, G. A., & Dewey, R. E. (2011). Molecular Characterization of the Mutant fap3(A22) Allele for Reduced Palmitate Concentration in Soybean. CROP SCIENCE, 51(4), 1611–1616. https://doi.org/10.2135/cropsci2010.10.0619 Cardinal, A. J., Burton, J. W., Camacho-Roger, A. M., Whetten, R., Chappell, A. S., Bilyeu, K. D., … Dewey, R. E. (2011). Molecular Analysis of GmFAD3A in Two Soybean Populations Segregating for the fan, fap1, and fap(nc) Loci. CROP SCIENCE, 51(5), 2104–2112. https://doi.org/10.2135/cropsci2010.08.0500 Aspinwall, M. J., King, J. S., Domec, J.-C., McKeand, S. E., & Isik, F. (2011). Genetic effects on transpiration, canopy conductance, stomatal sensitivity to vapour pressure deficit, and cavitation resistance in loblolly pine. ECOHYDROLOGY, 4(2), 168–182. https://doi.org/10.1002/eco.197 Swarup, S., Williams, T. I., & Anholt, R. R. H. (2011). Functional dissection of Odorant binding protein genes in Drosophila melanogaster. GENES BRAIN AND BEHAVIOR, 10(6), 648–657. https://doi.org/10.1111/j.1601-183x.2011.00704.x Blanco-Meneses, M., & Ristaino, J. B. (2011). Detection and Quantification of Peronospora tabacina Using a Real-Time Polymerase Chain Reaction Assay. PLANT DISEASE, 95(6), 673–682. https://doi.org/10.1094/pdis-05-10-0333 Clouse, S. D. (2011). [Review of Brassinosteroid signal transduction: from receptor kinase activation to transcriptional networks regulating plant development]. Plant Cell, 23(4), 1219–1230. https://doi.org/10.1105/tpc.111.084475 Beard, A. W., Maggi, R. G., Kennedy-Stoskopf, S., Cherry, N. A., Sandfoss, M. R., DePerno, C. S., & Breitschwerdt, E. B. (2011). Bartonella spp. in Feral Pigs, Southeastern United States. Emerging Infectious Diseases, 17(5), 893–895. https://doi.org/10.3201/eid1705.100141 Wood, M. W., Nordone, S. K., Vaden, S. L., & Breitschwerdt, E. B. (2011). Assessment of urine solute and matrix effects on the performance of an enzyme-linked immunosorbent assay for measurement of interleukin-6 in dog urine. JOURNAL OF VETERINARY DIAGNOSTIC INVESTIGATION, 23(2), 316–320. https://doi.org/10.1177/104063871102300219 Kononchik, J. P., Vancini, R., & Brown, D. T. (2011). Alphavirus adsorption to mosquito cells as viewed by freeze fracture immunolabeling. VIROLOGY, 415(2), 132–140. https://doi.org/10.1016/j.virol.2011.04.011 Atchley, W. R. (2011, May 13). Walter M. Fitch (1929-2011). SCIENCE, Vol. 332, pp. 804–804. https://doi.org/10.1126/science.1207426 Krayer, M., Yang, E., Kim, H.-J., Kee, H. L., Deans, R. M., Sluder, C. E., … Lindsey, J. S. (2011). Synthesis and Photophysical Characterization of Stable Indium Bacteriochlorins. INORGANIC CHEMISTRY, 50(10), 4607–4618. https://doi.org/10.1021/ic200325d Santa-Maria, M. C., Yencho, C. G., Haigler, C. H., Thompson, W. F., Kelly, R. M., & Sosinski, B. (2011). Starch Self-Processing in Transgenic Sweet Potato Roots Expressing a Hyperthermophilic alpha-Amylase. BIOTECHNOLOGY PROGRESS, 27(2), 351–359. https://doi.org/10.1002/btpr.573 Huber, D., & Amerson, H. (2011). Performance of the loblolly pine fusiform rust disease resistance gene (Fr1) in a slashXloblolly pine hybrid family. TREE GENETICS & GENOMES, 7(3), 535–540. https://doi.org/10.1007/s11295-010-0353-3 Kim, H.-S., Thammarat, P., Lommel, S. A., Hogan, C. S., & Charkowski, A. O. (2011). Pectobacterium carotovorum Elicits Plant Cell Death with DspE/F but the P. carotovorum DspE Does Not Suppress Callose or Induce Expression of Plant Genes Early in Plant-Microbe Interactions. MOLECULAR PLANT-MICROBE INTERACTIONS, 24(7), 773–786. https://doi.org/10.1094/mpmi-06-10-0143 Fronza, R., Tramonti, M., Atchley, W. R., & Nardini, C. (2011). Joint analysis of transcriptional and post-transcriptional brain tumor data: searching for emergent properties of cellular systems. BMC Bioinformatics, 12. Herrero, S., Gonzalez, E., Gillikin, J. W., Velez, H., & Daub, M. E. (2011). Identification and characterization of a pyridoxal reductase involved in the vitamin B6 salvage pathway in Arabidopsis. PLANT MOLECULAR BIOLOGY, 76(1-2), 157–169. https://doi.org/10.1007/s11103-011-9777-x Dorshorst, B. J., Siegel, P. B., & Ashwell, C. M. (2011). Genomic regions associated with antibody response to sheep red blood cells in the chicken. ANIMAL GENETICS, 42(3), 300–308. https://doi.org/10.1111/j.1365-2052.2010.02146.x Thompson, E. A., Zhu, S., Hall, J. R., House, J. S., Ranjan, R., Burr, J. A., … Smart, R. C. (2011). C/EBP alpha Expression Is Downregulated in Human Nonmelanoma Skin Cancers and Inactivation of C/EBP alpha Confers Susceptibility to UVB-Induced Skin Squamous Cell Carcinomas. JOURNAL OF INVESTIGATIVE DERMATOLOGY, 131(6), 1339–1346. https://doi.org/10.1038/jid.2011.31 Fenimore, A., Varanat, M., Maggi, R., Schultheiss, P., Breitschwerdt, E., & Lappin, M. R. (2011). Bartonella spp. DNA in Cardiac Tissues from Dogs in Colorado and Wyoming. Journal of Veterinary Internal Medicine, 25(3), 613–616. https://doi.org/10.1111/j.1939-1676.2011.0722.x Thomas, R., Seiser, E. L., Motsinger-Reif, A., Borst, L., Valli, V. E., Kelley, K., … Breen, M. (2011). Refining tumor-associated aneuploidy through 'genomic recoding' of recurrent DNA copy number aberrations in 150 canine non-Hodgkin lymphomas. LEUKEMIA & LYMPHOMA, 52(7), 1321–1335. https://doi.org/10.3109/10428194.2011.559802 Leduc, I., Fusco, W. G., Choudhary, N., Routh, P. A., Cholon, D. M., Hobbs, M. M., … Elkins, C. (2011). Passive Immunization with a Polyclonal Antiserum to the Hemoglobin Receptor of Haemophilus ducreyi Confers Protection against a Homologous Challenge in the Experimental Swine Model of Chancroid. INFECTION AND IMMUNITY, 79(8), 3168–3177. https://doi.org/10.1128/iai.00017-11 Carbone, M. A., Chen, Y., Hughes, G. A., Weinreb, R. N., Zabriskie, N. A., Zhang, K., & Anholt, R. R. H. (2011). Genes of the Unfolded Protein Response Pathway Harbor Risk Alleles for Primary Open Angle Glaucoma. PLOS ONE, 6(5). https://doi.org/10.1371/journal.pone.0020649 Aravindu, K., Krayer, M., Kim, H.-J., & Lindsey, J. S. (2011). Facile synthesis of a B,D-tetradehydrocorrin and rearrangement to bacteriochlorins. New Journal of Chemistry, 35(7), 1376. https://doi.org/10.1039/c1nj20027e Cumbie, W. P., Eckert, A., Wegrzyn, J., Whetten, R., Neale, D., & Goldfarb, B. (2011). Association genetics of carbon isotope discrimination, height and foliar nitrogen in a natural population of Pinus taeda L. HEREDITY, 107(2), 105–114. https://doi.org/10.1038/hdy.2010.168 Cherry, N. A., Liebisch, G., Liebisch, A., Breitschwerdt, E. B., Jones, S. L., Ulrich, R., … Hewicker-Trautwein, M. (2011). Identification of Bartonella henselae in a horse from Germany. Veterinary Microbiology, 150(3-4), 414–415. https://doi.org/10.1016/j.vetmic.2011.02.010 Walters, J., Swartz, P., Mattos, C., & Clark, A. C. (2011). Thermodynamic, enzymatic and structural effects of removing a salt bridge at the base of loop 4 in (pro)caspase-3. ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS, 508(1), 31–38. https://doi.org/10.1016/j.abb.2011.01.011 Mohamadzadeh, M., Pfeiler, E. A., Brown, J. B., Zadeh, M., Gramarossa, M., Managlia, E., … Klaenhammer, T. R. (2011). Regulation of induced colonic inflammation by Lactobacillus acidophilus deficient in lipoteichoic acid. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 108, 4623–4630. https://doi.org/10.1073/pnas.1005066107 Aspinwall, M. J., King, J. S., McKeand, S. E., & Domec, J.-C. (2011). Leaf-level gas-exchange uniformity and photosynthetic capacity among loblolly pine (Pinus taeda L.) genotypes of contrasting inherent genetic variation. TREE PHYSIOLOGY, 31(1), 78–91. https://doi.org/10.1093/treephys/tpq107 Lee, Y.-H., Su, K.-Y., Wyse, A., Barbas, A., Palestrandt, D., Shieh, K., … Parker, W. (2011). Incorporation of secretory immunoglobulin A into biofilms can decrease their resistance to ciprofloxacin. MICROBIOLOGY AND IMMUNOLOGY, 55(3), 174–183. https://doi.org/10.1111/j.1348-0421.2010.00297.x Duarte, C. W., & Zeng, Z.-B. (2011). High-Confidence Discovery of Genetic Network Regulators in Expression Quantitative Trait Loci Data. GENETICS, 187(3), 955–964. https://doi.org/10.1534/genetics.110.124685 Cardona, J. A. C., Milner, R., Alleman, A. R., Williams, C., Vernau, W., Breen, M., & Tompkins, M. (2011). BCR-ABL translocation in a dog with chronic monocytic leukemia. VETERINARY CLINICAL PATHOLOGY, 40(1), 40–47. https://doi.org/10.1111/j.1939-165x.2010.00277.x Lockney, D. M., Guenther, R. N., Loo, L., Overton, W., Antonelli, R., Clark, J., … Franzen, S. (2011). The Red clover necrotic mosaic virus Capsid as a Multifunctional Cell Targeting Plant Viral Nanoparticle. BIOCONJUGATE CHEMISTRY, 22(1), 67–73. https://doi.org/10.1021/bc100361z Mass, O., Taniguchi, M., Ptaszek, M., Springer, J. W., Faries, K. M., Diers, J. R., … Lindsey, J. S. (2011). Structural characteristics that make chlorophylls green: interplay of hydrocarbon skeleton and substituents. NEW JOURNAL OF CHEMISTRY, 35(1), 76–88. https://doi.org/10.1039/c0nj00652a Palle, S. R., Seeve, C. M., Eckert, A. J., Cumbie, W. P., Goldfarb, B., & Loopstra, C. A. (2011). Natural variation in expression of genes involved in xylem development in loblolly pine (Pinus taeda L.). TREE GENETICS & GENOMES, 7(1), 193–206. https://doi.org/10.1007/s11295-010-0325-7 Suter, S. E., Small, G. W., Seiser, E. L., Thomas, R., Breen, M., & Richards, K. L. (2011). FLT3 mutations in canine acute lymphocytic leukemia. BMC CANCER, 11. https://doi.org/10.1186/1471-2407-11-38 Scholl, E. H., & Bird, D. M. K. (2011, February 22). Computational and phylogenetic validation of nematode horizontal gene transfer. BMC BIOLOGY, Vol. 9. https://doi.org/10.1186/1741-7007-9-9 Lindsey, J. S., Chandrashaker, V., Taniguchi, M., & Ptaszek, M. (2011). Abiotic formation of uroporphyrinogen and coproporphyrinogen from acyclic reactants. NEW JOURNAL OF CHEMISTRY, 35(1), 65–75. https://doi.org/10.1039/c0nj00716a Kubisiak, T. L., Anderson, C. L., Amerson, H. V., Smith, J. A., Davis, J. M., & Nelson, C. D. (2011). A genomic map enriched for markers linked to Avr1 in Cronartium quercuum f.sp. fusiforme. FUNGAL GENETICS AND BIOLOGY, 48(3), 266–274. https://doi.org/10.1016/j.fgb.2010.09.008 Hunt, S. R., Hernandez, R., & Brown, D. T. (2011). Role of the Vacuolar-ATPase in Sindbis Virus Infection. JOURNAL OF VIROLOGY, 85(3), 1257–1266. https://doi.org/10.1128/jvi.01864-10 Kaye, A. C., Moyer, J. W., Parks, E. J., Carbone, I., & Cubeta, M. A. (2011). Population Genetic Analysis of Tomato spotted wilt virus on Peanut in North Carolina and Virginia. PHYTOPATHOLOGY, 101(1), 147–153. https://doi.org/10.1094/phyto-01-10-0035 Ji, Y., Hebbring, S., Zhu, H., Jenkins, G. D., Biernacka, J., Snyder, K., … Weinshilboum, R. M. (2011). Glycine and a Glycine Dehydrogenase (GLDC) SNP as Citalopram/Escitalopram Response Biomarkers in Depression: Pharmacometabolomics-Informed Pharmacogenomics. CLINICAL PHARMACOLOGY & THERAPEUTICS, 89(1), 97–104. https://doi.org/10.1038/clpt.2010.250 Nash, T. E., Dallas, M. B., Reyes, M. I., Buhrman, G. K., Ascencio-Ibanez, J. T., & Hanley-Bowdoin, L. (2011). Functional Analysis of a Novel Motif Conserved across Geminivirus Rep Proteins. JOURNAL OF VIROLOGY, 85(3), 1182–1192. https://doi.org/10.1128/jvi.02143-10 Perez, C., Fujii, Y., Fauls, M., Hummel, J., & Breitschwerdt, E. (2011). Fatal Aortic Endocarditis Associated with Community-Acquired Serratia marcescens Infection in a Dog. JOURNAL OF THE AMERICAN ANIMAL HOSPITAL ASSOCIATION, 47(2), 133–137. https://doi.org/10.5326/jaaha-ms-5616 Wood, M. W., Breitschwerdt, E. B., & Gookin, J. L. (2011). Autocrine Effects of Interleukin-6 Mediate Acute-Phase Proinflammatory and Tissue-Reparative Transcriptional Responses of Canine Bladder Mucosa. INFECTION AND IMMUNITY, 79(2), 708–715. https://doi.org/10.1128/iai.01102-10 Lindsey, J. S., Mass, O., & Chen, C.-Y. (2011). Tapping the near-infrared spectral region with bacteriochlorin arrays. NEW JOURNAL OF CHEMISTRY, 35(3), 511–516. https://doi.org/10.1039/c0nj00977f Mikkelsen, S. R., Long, J. M., Zhang, L., Galemore, E. R., VandeWoude, S., & Dean, G. A. (2011). Partial Regulatory T Cell Depletion Prior to Acute Feline Immunodeficiency Virus Infection Does Not Alter Disease Pathogenesis. PLOS ONE, 6(2). https://doi.org/10.1371/journal.pone.0017183 Hibbert-Frey, H., Frampton, J., Blazich, F. A., Hundley, D., & Hinesley, L. E. (2011). Grafting fraser fir (Abies fraseri): Effect of scion origin (crown position and branch order). HortScience, 46(1), 91–94. Krayer, M., Yang, E., Diers, J. R., Bocian, D. F., Holten, D., & Lindsey, J. S. (2011). De novo synthesis and photophysical characterization of annulated bacteriochlorins. Mimicking and extending the properties of bacteriochlorophylls. New Journal of Chemistry, 35(3), 587. https://doi.org/10.1039/c0nj00771d Fulkerson, E., & Estes, P. A. (2011). Common motifs shared by conserved enhancers of Drosophila midline glial genes. Journal of Experimental Zoology. Part B, Molecular and Developmental Evolution, 316B(1), 61–75.