Works Published in 2011
Displaying works 21 - 40 of 124 in total
Sorted by most recent date added to the index first, which may not be the same as publication date order.
2011 journal article
DNA barcoding of oomycetes with cytochrome c oxidase subunit I and internal transcribed spacer
Molecular Ecology Resources, 11(6), 1002–1011.
Contributors: G. Robideau*, A. De Cock*, M. Coffey*, H. Voglmayr *, H. Brouwer*, K. Bala*, D. Chitty*, N. Désaulniers*
author keywords: cytochrome c oxidase subunit I; DNA barcoding; internal transcribed spacer; oomycete; species identification
MeSH headings : Base Sequence; Cluster Analysis; DNA Barcoding, Taxonomic / methods; DNA Primers / genetics; DNA, Ribosomal Spacer / genetics; Electron Transport Complex IV / genetics; Models, Genetic; Molecular Sequence Data; Oomycetes / genetics; Sequence Analysis, DNA
TL;DR:
The results described in this paper indicate that COI sequencing and the dataset generated are a valuable addition to the currently available oomycete taxonomy resources, and that both COI, the default DNA barcode supported by GenBank, and ITS, the de facto barcode accepted by the oomyCete and mycology community, are acceptable and complementary DNA barcodes to be used for identification of oomy cetes.
(via Semantic Scholar)
www.ncbi.nlm.nih.gov (repository)
Source: ORCID
Added: December 19, 2019
2011 conference paper
Quadratic-time certificates in linear algebra
Proceedings of the 36th international symposium on Symbolic and algebraic computation - ISSAC '11. Presented at the the 36th international symposium.
Event: the 36th international symposium
Source: Crossref
Added: August 18, 2019
2011 conference paper
Supersparse black box rational function interpolation
Proceedings of the 36th international symposium on Symbolic and algebraic computation - ISSAC '11. Presented at the the 36th international symposium.
Event: the 36th international symposium
TL;DR:
A method for interpolating a supersparse blackbox rational function with rational coefficients, for example, a ratio of binomials or trinomials with very high degree, which is very effective for rational functions with a small number of non-zero terms, but it quickly becomes ineffective for a high number of terms.
(via Semantic Scholar)
Source: Crossref
Added: July 27, 2019
2011 conference paper
Fast estimates of Hankel matrix condition numbers and numeric sparse interpolation
Proceedings of the 2011 International Workshop on Symbolic-Numeric Computation - SNC '11. Presented at the the 2011 International Workshop.
Event: the 2011 International Workshop
Source: Crossref
Added: July 27, 2019
2011 other
Symmetric determinantal representation of formulas and weakly skew circuits
Source: Crossref
Added: July 27, 2019
2011 chapter
The “Seven Dwarfs” of Symbolic Computation
In Texts & Monographs in Symbolic Computation (pp. 95–104).
TL;DR:
The Seven Dwarfs of Symbolic Computation, which are sequential and parallel algorithmic methods that today carry a great majority of all exact and hybrid symbolic compute cycles, are presented.
(via Semantic Scholar)
Source: Crossref
Added: July 27, 2019
2011 journal article
QTL Mapping for Days to Flowering under Drought Condition in Rice (Oryza sativa L.) Genome
Notulae Botanicae Horti Agrobotanici Cluj-Napoca, 39(1), 58.
TL;DR:
The five common QTL detected by at least two models could be considered as stable QTL for days to flowering under drought and might be of practical use in marker assisted selection.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
14. Life Below Water
(OpenAlex)
Source: Crossref
Added: July 20, 2019
2011 journal article
Bartonella spp. bacteremia in high-risk immunocompetent patients
Diagnostic Microbiology and Infectious Disease, 71(4), 430–437.
author keywords: Bartonella; BAPGM; Whole blood culture; Human; Isolation; PCR detection; IFA
MeSH headings : Adolescent; Adult; Aged; Aged, 80 and over; Animals; Antibodies, Bacterial / blood; Bacteremia / diagnosis; Bacteremia / microbiology; Bacteremia / pathology; Bacteriological Techniques / methods; Bartonella / isolation & purification; Bartonella Infections / diagnosis; Bartonella Infections / microbiology; Bartonella Infections / pathology; Bites and Stings / complications; Child; Female; Humans; Male; Middle Aged; Molecular Diagnostic Techniques / methods; Sensitivity and Specificity; Serologic Tests / methods; Skin / injuries; Young Adult
TL;DR:
Serology, in conjunction with blood, serum, and BAPGM enrichment culture PCR, facilitates the diagnosis of Bartonella spp.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science; OpenAlex)
Sources: Crossref, ORCID
Added: July 20, 2019
2011 journal article
Total and merchantable stem volume equations for midrotation loblolly pine (Pinus taeda L.)
Southern Journal of Applied Forestry, 35(3), 105–108.
Source: NC State University Libraries
Added: August 6, 2018
2011 journal article
Heterogeneous Rates of Molecular Evolution Among Cryptic Species of the Ciliate Morphospecies Chilodonella uncinata
JOURNAL OF MOLECULAR EVOLUTION, 73(5-6), 266–272.
author keywords: Cryptic species; Molecular evolution; Genome architecture; Ciliate
MeSH headings : Ciliophora / classification; Ciliophora / genetics; DNA, Ribosomal / genetics; Evolution, Molecular; Genome; Mitochondrial Proteins / genetics; Nuclear Proteins / genetics; Phylogeny; Recombination, Genetic / genetics; Species Specificity; Tubulin / genetics
TL;DR:
Describing the diversity of several nuclear protein-coding genes plus both nSSU-rDNA and mitochondrial small subunit rDNA of five isolates of the ciliate morphospecies Chilodonella uncinata indicates that C. uncInata lineages are able to maintain both highly divergent and highly conserved genes within a rapidly evolving germline genome.
(via Semantic Scholar)
Source: Web Of Science
Added: August 6, 2018
2011 journal article
Encoding isotopic watermarks in molecular electronic materials as an anti-counterfeiting strategy. Application to porphyrins for information storage
JOURNAL OF PORPHYRINS AND PHTHALOCYANINES, 15(7-8), 505–516.
author keywords: watermark; mass encoding; isotope; porphyrin; capacitor; chip; resonance Raman; mass spectrometry
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
Sources: Web Of Science, ORCID
Added: August 6, 2018
2011 journal article
Effects of propagule type on genetic parameters of wood density and growth in a loblolly pine progeny test at ages 10 and 11 years
TREE GENETICS & GENOMES, 7(6), 1147–1158.
author keywords: Pinus taeda; Wood density; Heritability; Clones; Vegetative propagation
TL;DR:
Nine full-sib families of loblolly pine produced by a 3 × 3 factorial mating design showed that individual-tree and family heritability estimates from rooted cuttings were similar to or higher than those from seedlings for all traits, which suggests that wood density and height breeding value estimates can be estimated by traditional seedling tests, but not for tree diameter.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
13. Climate Action
(Web of Science)
15. Life on Land
(Web of Science; OpenAlex)
Source: Web Of Science
Added: August 6, 2018
2011 journal article
A Complex Genomic Rearrangement Involving the Endothelin 3 Locus Causes Dermal Hyperpigmentation in the Chicken
PLOS GENETICS, 7(12).
MeSH headings : Animals; Base Sequence; Breeding; Cell Proliferation; Chick Embryo; Chickens / genetics; Chickens / growth & development; Chromosome Mapping; Endothelin-3 / genetics; Feathers / growth & development; Gene Duplication; Gene Expression Regulation, Developmental; Gene Rearrangement; Genome; Melanocytes / cytology; Melanocytes / metabolism; Molecular Sequence Data; Mutation; Polymorphism, Single Nucleotide; Quantitative Trait, Heritable; Skin Pigmentation / genetics
TL;DR:
It is concluded that the same structural variant underlies this phenotype in all chicken breeds and this complex genomic rearrangement causing a specific monogenic trait in the chicken illustrates how novel mutations with major phenotypic effects have been reused during breed formation in domestic animals.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
Source: Web Of Science
Added: August 6, 2018
2011 journal article
Enteric Microbiome Metabolites Correlate with Response to Simvastatin Treatment
PLOS ONE, 6(10).
MeSH headings : Bile Acids and Salts / metabolism; Cholesterol, LDL / blood; Demography; Female; Gastrointestinal Tract / drug effects; Gastrointestinal Tract / metabolism; Gastrointestinal Tract / microbiology; Humans; Liver-Specific Organic Anion Transporter 1; Male; Metabolomics; Metagenome / drug effects; Middle Aged; Models, Biological; Organic Anion Transporters / genetics; Pharmacogenetics; Polymorphism, Single Nucleotide / genetics; Simvastatin / pharmacology; Treatment Outcome
TL;DR:
Interactions between genome, gut microbiome and environmental influences should be considered in the study and management of cardiovascular disease and metabolic profiles could provide valuable information about treatment outcomes and could contribute to a more personalized approach to therapy.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
Source: Web Of Science
Added: August 6, 2018
2011 journal article
Tomato SlSnRK1 Protein Interacts with and Phosphorylates beta C1, a Pathogenesis Protein Encoded by a Geminivirus beta-Satellite
PLANT PHYSIOLOGY, 157(3), 1394–1406.
MeSH headings : DNA, Viral / metabolism; Geminiviridae / metabolism; Geminiviridae / pathogenicity; Gene Expression Regulation, Plant; Solanum lycopersicum / enzymology; Solanum lycopersicum / genetics; Solanum lycopersicum / virology; Mutation / genetics; Phosphorylation; Phosphoserine / metabolism; Phosphothreonine / metabolism; Plant Diseases / virology; Plant Proteins / chemistry; Plant Proteins / genetics; Plant Proteins / metabolism; Protein Binding; Protein Interaction Domains and Motifs; Satellite Viruses / metabolism; Satellite Viruses / pathogenicity; Subcellular Fractions / metabolism; Viral Proteins / chemistry; Viral Proteins / metabolism
TL;DR:
Results suggested that the SlSnRK1 protein attenuates geminivirus infection by interacting with and phosphorylating the βC1 protein.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
Sources: Web Of Science, ORCID
Added: August 6, 2018
2011 journal article
Re-evaluation of the life-cycle of the nematode-parasitic bacterium Pasteuria penetrans in root-knot nematodes, Meloidogyne spp.
NEMATOLOGY, 13, 825–835.
author keywords: bacteria; biological control; rod-shaped bacilli; scanning electron microscopy
TL;DR:
A new life-cycle for Pasteuria is described consisting of three phases: Phase I: attachment and germination; Phase II: rhizoid production and exponential growth; and Phase III: sporogenesis, showing a high degree of similarity to the developmental stages seen in other Bacillus spp.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger
(Web of Science)
13. Climate Action
(Web of Science)
Source: Web Of Science
Added: August 6, 2018
2011 journal article
Molecular Analysis of Mutant Alleles for Elevated Palmitate Concentration in Soybean
CROP SCIENCE, 51(6), 2554–2560.
TL;DR:
The objective of this study was to determine whether the elevated palmitate phenotypes in any of these lines were associated with mutations in either of the two known 3-ketoacyl-ACP synthase II (KAS II) genes of soybean, GmKas IIA and GmkAS IIB.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
Source: Web Of Science
Added: August 6, 2018
2011 journal article
Membrane protein complexes catalyze both 4-and 3-hydroxylation of cinnamic acid derivatives in monolignol biosynthesis
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 108(52), 21253–21258.
MeSH headings : Carboxylic Ester Hydrolases / chemistry; Carboxylic Ester Hydrolases / metabolism; Chromatography, Liquid; Coumaric Acids; DNA Primers / genetics; Hydroxylation; Immunoprecipitation; Kinetics; Lignin / biosynthesis; Mass Spectrometry; Membrane Proteins / chemistry; Membrane Proteins / metabolism; Microscopy, Confocal; Molecular Structure; Multiprotein Complexes / chemistry; Multiprotein Complexes / metabolism; Phenols; Phenylpropionates; Plasmids / genetics; Populus / metabolism; Propionates; Trans-Cinnamate 4-Monooxygenase / chemistry; Trans-Cinnamate 4-Monooxygenase / metabolism; Xylem / metabolism; Yeasts
TL;DR:
Affinity purification-quantitative mass spectrometry, bimolecular fluorescence complementation, chemical cross-linking, and reciprocal coimmunoprecipitation provide further evidence for functional involvement of membrane protein complexes in monolignol biosynthesis.
(via Semantic Scholar)
Source: Web Of Science
Added: August 6, 2018
2011 journal article
Interaction between Geminivirus Replication Protein and the SUMO-Conjugating Enzyme Is Required for Viral Infection
JOURNAL OF VIROLOGY, 85(19), 9789–9800.
MeSH headings : Amino Acid Substitution; Binding Sites; DNA Mutational Analysis; Geminiviridae / pathogenicity; Host-Pathogen Interactions; Mutagenesis, Site-Directed; Mutant Proteins / genetics; Mutant Proteins / metabolism; Protein Binding; Protein Interaction Mapping; Sequence Deletion; Tobacco / virology; Ubiquitin-Conjugating Enzymes / metabolism; Viral Proteins / genetics; Viral Proteins / metabolism
TL;DR:
The results established the importance of AL1-SCE1 interactions during geminivirus infection of plants and suggested that AL1 alters the sumoylation of selected host factors to create an environment suitable for viral infection.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger
(Web of Science)
13. Climate Action
(Web of Science)
Sources: Web Of Science, ORCID
Added: August 6, 2018
2011 journal article
DNA barcoding of oomycetes with cytochrome c oxidase subunit I and internal transcribed spacer
Molecular Ecology Resources, 11(6), 1002–1011.
Source: NC State University Libraries
Added: August 6, 2018
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