Works Published in 2013

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Displaying works 41 - 60 of 107 in total

Sorted by most recent date added to the index first, which may not be the same as publication date order.

2013 journal article

Productivity differences among loblolly pine genotypes are independent of individual-tree biomass partitioning and growth efficiency

TREES-STRUCTURE AND FUNCTION, 27(3), 533–545.

By: M. Aspinwall n, J. King n & S. McKeand n

author keywords: Allometry; Clone; Growth efficiency; Loblolly pine; Productivity
TL;DR: The observed variation in biomass partitioning has implications for forest C sequestration as genotypes which partition more biomass to long-lived biomass pools such as stems, may sequester more C and suggest that highly productive genotypes may be planted without compromising belowground C storage. (via Semantic Scholar)
UN Sustainable Development Goal Categories
13. Climate Action (Web of Science)
15. Life on Land (Web of Science)
Sources: Web Of Science, ORCID
Added: August 6, 2018

2013 journal article

Phylogenetic Diversity of Bacteria Isolated from Sick Dogs Using the BAPGM Enrichment Culture Platform

Journal of Veterinary Internal Medicine, 27(4), 854–861.

By: A. Davenport n, P. Mascarelli n, R. Maggi n & E. Breitschwerdt n

author keywords: Fastidious; Infection; Isolation; Sphingomonas
MeSH headings : Animals; Bacteria / classification; Bacteria / genetics; Bacterial Infections / microbiology; Bacterial Infections / veterinary; Bacteriological Techniques / methods; DNA, Bacterial / genetics; Dog Diseases / microbiology; Dogs; Phylogeny; RNA, Ribosomal, 16S / genetics
TL;DR: Use of insect cell culture enrichment medium, such as BAPGM, appears to enhance the growth of alpha-Proteobacteria, but also results in isolation of non-alpha-Proteinobacteria from sick dogs, suggesting these organisms play a causal role in disease development. (via Semantic Scholar)
Sources: Web Of Science, NC State University Libraries, Crossref
Added: August 6, 2018

2013 journal article

Localization, morphology and transcriptional profile of Aspergillus flavus during seed colonization

MOLECULAR PLANT PATHOLOGY, 14(9), 898–909.

By: A. Dolezal n, G. Obrian n, D. Nielsen n, C. Woloshuk*, R. Boston n & G. Payne n

MeSH headings : Aspergillus flavus / genetics; Aspergillus flavus / growth & development; Aspergillus flavus / pathogenicity; Chromosomes, Fungal / genetics; Colony Count, Microbial; DNA, Fungal / isolation & purification; Electrophoresis, Agar Gel; Endosperm / microbiology; Gene Expression Profiling; Gene Expression Regulation, Fungal; Genes, Fungal / genetics; Humans; Seeds / cytology; Seeds / microbiology; Transcription Factors / metabolism; Transcription, Genetic; Zea mays / cytology; Zea mays / microbiology
TL;DR: Results from these studies indicate that A. flavus is capable of infecting all tissues of the immature kernel by 96 h after infection and will aid in the development of strategies aimed at preventing or slowing down A. flavus colonization of the maize kernel. (via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger (OpenAlex)
Source: Web Of Science
Added: August 6, 2018

2013 journal article

Genomic Estimated Breeding Values Using Genomic Relationship Matrices in a Cloned Population of Loblolly Pine

G3-GENES GENOMES GENETICS, 3(5), 909–916.

By: J. Zapata-Valenzuela n, R. Whetten n, D. Neale*, S. McKeand n & F. Isik n

author keywords: GenPred; Shared data resource; Pinus taeda quantitative genetics best linear unbiased prediction
MeSH headings : Breeding; Cloning, Molecular; Gene Frequency / genetics; Genetics, Population; Genome, Plant / genetics; Genomics / methods; Linear Models; Pinus taeda / genetics; Regression Analysis; Reproducibility of Results; Trees / genetics
TL;DR: Estimation of genomic relationships could be a powerful tool in forest tree breeding because it accurately accounts both for genetic relationships among individuals and for nuisance effects such as location and replicate effects, and makes more accurate selection possible within full-sib crosses. (via Semantic Scholar)
Sources: Web Of Science, NC State University Libraries
Added: August 6, 2018

2013 journal article

Enhancing Agrobacterium tumefaciens-mediated transformation efficiency of perennial ryegrass and rice using heat and high maltose treatments during bacterial infection

PLANT CELL TISSUE AND ORGAN CULTURE, 114(1), 19–29.

By: M. Patel n, R. Dewey n & R. Qu n

author keywords: Heat shock; Maltose; Rice; Perennial ryegrass; Transformation
UN Sustainable Development Goal Categories
15. Life on Land (Web of Science)
Source: Web Of Science
Added: August 6, 2018

2013 journal article

Slow folding and assembly of a procaspase-3 interface variant

Biochemistry, 52(20), 3415–3427.

Source: NC State University Libraries
Added: August 6, 2018

2013 journal article

Reconstructing genome evolution in historic samples of the Irish potato famine pathogen

NATURE COMMUNICATIONS, 4.

By: M. Martin*, E. Cappellini*, J. Samaniego*, M. Zepeda*, P. Campos*, A. Seguin-Orlando*, N. Wales*, L. Orlando* ...

Contributors: M. Martin*, E. Cappellini*, J. Samaniego*, M. Zepeda*, P. Campos*, A. Seguin-Orlando*, N. Wales*, L. Orlando* ...

MeSH headings : Evolution, Molecular; Genome, Fungal; Genotype; High-Throughput Nucleotide Sequencing; History, 19th Century; Humans; Ireland; Phenotype; Phylogeny; Phytophthora infestans / classification; Phytophthora infestans / genetics; Phytophthora infestans / pathogenicity; Plant Diseases / history; Plant Diseases / microbiology; Solanum tuberosum / microbiology; Starvation / history; Starvation / microbiology; Virulence
TL;DR: At least one of these genotypes encodes a virulent phenotype in modern strains, which helps explain the 20th century’s episodic replacements of European P. infestans lineages. (via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger (OpenAlex)
Sources: Web Of Science, ORCID
Added: August 6, 2018

2013 journal article

Peptide Aptamers That Bind to Geminivirus Replication Proteins Confer a Resistance Phenotype to Tomato Yellow Leaf Curl Virus and Tomato Mottle Virus Infection in Tomato

JOURNAL OF VIROLOGY, 87(17), 9691–9706.

By: M. Reyes n, T. Nash n, M. Dallas n, J. Ascencio-Ibanez n & L. Hanley-Bowdoin n

MeSH headings : Amino Acid Sequence; Aptamers, Peptide / genetics; Aptamers, Peptide / metabolism; Begomovirus / genetics; Begomovirus / pathogenicity; Begomovirus / physiology; DNA, Viral / genetics; DNA, Viral / metabolism; Geminiviridae / genetics; Geminiviridae / pathogenicity; Geminiviridae / physiology; Solanum lycopersicum / virology; Molecular Sequence Data; Phenotype; Plant Diseases / genetics; Plant Diseases / prevention & control; Plant Diseases / virology; Plants, Genetically Modified; Protein Binding; Two-Hybrid System Techniques; Viral Proteins / genetics; Viral Proteins / physiology; Virus Replication
TL;DR: The efficacy of using Rep-binding peptide aptamers to develop crops that are resistant to diverse geminiviruses is established. (via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger (Web of Science)
13. Climate Action (Web of Science)
Sources: Web Of Science, ORCID
Added: August 6, 2018

2013 journal article

New insight into the structure of RNA in red clover necrotic mosaic virus and the role of divalent cations revealed by small-angle neutron scattering

ARCHIVES OF VIROLOGY, 158(8), 1661–1669.

By: S. Martin n, L. He*, F. Meilleur*, R. Guenther n, T. Sit n, S. Lommel n, W. Heller*

TL;DR: Small-angle neutron scattering with contrast variation experiments were performed to better understand the organization of the RNA and conformational changes resulting from the removal of divalent cations in red clover necrotic mosaic virus and provide new insight into changes in the RNA packing. (via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger (Web of Science)
13. Climate Action (Web of Science)
Source: Web Of Science
Added: August 6, 2018

2013 review

Molecular genetics of alkaloid biosynthesis in Nicotiana tabacum

[Review of ]. PHYTOCHEMISTRY, 94, 10–27.

author keywords: Nicotiana tabacum; Solanaceae; Nicotine; Nornicotine; Tobacco-specific nitrosamines; Alkaloid biosynthetic genes
MeSH headings : Alkaloids / biosynthesis; Alkaloids / chemistry; Biosynthetic Pathways / genetics; Gene Expression Regulation, Plant; Methyltransferases / genetics; Methyltransferases / metabolism; Molecular Structure; Nicotine / biosynthesis; Nicotine / chemistry; Nitrosamines / metabolism; Plant Proteins / genetics; Plant Proteins / metabolism; Pyridines / chemistry; Tobacco / enzymology; Tobacco / genetics; Tobacco / metabolism
TL;DR: Recent advances in understanding of the molecular genetics of alkaloid biosynthesis in tobacco are summarized, and the potential for applying information accrued from these studies toward efforts designed to help mitigate some of the negative health consequences associated with the use of tobacco products is discussed. (via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger (Web of Science)
3. Good Health and Well-being (OpenAlex)
13. Climate Action (Web of Science)
Source: Web Of Science
Added: August 6, 2018

2013 journal article

Integration of multiple chromophores with native photosynthetic antennas to enhance solar energy capture and delivery

Chemical Science, 4(10), 3924.

By: M. Harris*, P. Parkes-Loach*, J. Springer*, J. Jiang n, E. Martin*, P. Qian*, J. Jiao*, D. Niedzwiedzki* ...

UN Sustainable Development Goal Categories
7. Affordable and Clean Energy (OpenAlex)
Sources: Crossref, ORCID, NC State University Libraries
Added: August 6, 2018

2013 journal article

Infection with Hemotropic Mycoplasma Species in Patients with or without Extensive Arthropod or Animal Contact

Journal of Clinical Microbiology, 51(10), 3237–3241.

By: R. Maggi n, S. Compton n, C. Trull n, P. Mascarelli n, B. Mozayeni & E. Breitschwerdt n

MeSH headings : Adult; Cohort Studies; DNA, Bacterial / chemistry; DNA, Bacterial / genetics; DNA, Ribosomal / chemistry; DNA, Ribosomal / genetics; Environmental Exposure; Female; Humans; Male; Middle Aged; Molecular Sequence Data; Mycoplasma / classification; Mycoplasma / genetics; Mycoplasma / isolation & purification; Mycoplasma Infections / epidemiology; Mycoplasma Infections / microbiology; Occupational Exposure; Prevalence; RNA, Ribosomal, 16S / genetics; Sequence Analysis, DNA; Young Adult
TL;DR: The prevalence of hemotropic mycoplasma infection was significantly greater in previously reported cohorts of veterinarians, veterinary technicians, spouses of veterinary professionals, and others with extensive arthropod exposure and/or frequent animal contact than in a previously reported cohort of patients examined by a rheumatologist because of chronic joint pain or evidence of small-vessel disease. (via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being (Web of Science; OpenAlex)
Sources: Web Of Science, NC State University Libraries, Crossref
Added: August 6, 2018

2013 journal article

High-level gene expression in differentiating xylem of tobacco driven by a 2.0 kb Poplar COMT2 promoter and a 4 x 35S enhancer

PLANT BIOTECHNOLOGY, 30(2), 191–198.

By: E. Liu n, S. Peng, Q. Li n, Y. Sun*, V. Chiang n & R. Sederoff n

author keywords: PtrCOMT2 promoter; xylem-specific; 4 x 35S enhancer; woody plants; genetic engineering
TL;DR: While expression of some of the enhancer-plus-promoter constructs increased expression, there was a loss of specificity in the PtrCOMT2 promoter. (via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being (OpenAlex)
Source: Web Of Science
Added: August 6, 2018

2013 journal article

Hemlock woolly adelgid (Adelges tsugae) infestation affects water and carbon relations of eastern hemlock (Tsuga canadensis) and Carolina hemlock (Tsuga caroliniana)

NEW PHYTOLOGIST, 199(2), 452–463.

By: J. Domec n, L. Rivera n, J. King n, I. Peszlen n, F. Hain n, B. Smith n, J. Frampton n

author keywords: carbon isotope; hydraulic conductivity; mortality; soil-plant-atmosphere model; stomatal conductance; traumatic resin canals; water potential; wood anatomy
MeSH headings : Animals; Carbon / metabolism; Carbon Isotopes; Circadian Rhythm / physiology; Hemiptera / physiology; Models, Biological; Nitrogen / metabolism; Plant Diseases / parasitology; Plant Leaves / anatomy & histology; Plant Leaves / physiology; Plant Stems / physiology; Plant Stomata / physiology; Seasons; Tsuga / parasitology; Water / metabolism; Wood / anatomy & histology; Xylem / anatomy & histology
TL;DR: Despite some leaf compensatory mechanisms, such as an increase in leaf hydraulic conductance and nitrogen content, tree water use and carbon assimilation were diminished significantly in infested trees, which could contribute to tree mortality. (via Semantic Scholar)
UN Sustainable Development Goal Categories
6. Clean Water and Sanitation (OpenAlex)
13. Climate Action (Web of Science)
15. Life on Land (Web of Science)
Source: Web Of Science
Added: August 6, 2018

2013 journal article

A fraction free Matrix Berlekamp/Massey algorithm

LINEAR ALGEBRA AND ITS APPLICATIONS, 439(9), 2515–2526.

By: E. Kaltofen n & G. Yuhasz n

author keywords: Exact division; Linear recurrences; Matrix recurrences; Block Hankel systems; Block Toeplitz systems; Integer sequences
TL;DR: This new scalar algorithm has smaller intermediate values than the known fraction free Berlekamp/Massey algorithm and performs all operations in the integral domain, so all divisions performed are exact. (via Semantic Scholar)
Source: Web Of Science
Added: August 6, 2018

2013 journal article

A flexible model for the mean and variance functions, with application to medical cost data

STATISTICS IN MEDICINE, 32(24), 4306–4318.

author keywords: generalized linear model; semiparametric regression; health econometrics; smoothing parameter; generalized cross-validation
MeSH headings : Computer Simulation; Delivery of Health Care / economics; Heart Failure / economics; Humans; Likelihood Functions; Models, Economic; Models, Statistical; Virginia
TL;DR: This work considers an extension to generalized linear models by assuming nonlinear associations of covariates in the mean function and allowing the variance to be an unknown but smooth function of the mean. (via Semantic Scholar)
Source: Web Of Science
Added: August 6, 2018

2013 journal article

A Novel Candidate Vaccine for Cytauxzoonosis Inferred from Comparative Apicomplexan Genomics

PLOS ONE, 8(8).

By: J. Tarigo n, E. Scholl n, D. Bird n, C. Brown*, L. Cohn*, G. Dean n, M. Levy n, D. Doolan* ...

Contributors: J. Tarigo n, E. Scholl n, D. Bird n, C. Brown*, L. Cohn*, G. Dean n, M. Levy n, D. Doolan* ...

MeSH headings : Animals; Antigens, Protozoan / genetics; Antigens, Protozoan / immunology; Cat Diseases / immunology; Cat Diseases / parasitology; Cat Diseases / prevention & control; Cats; Cattle; Conserved Sequence; Genome, Protozoan; Genomics; Immune Sera / immunology; Piroplasmida / genetics; Piroplasmida / immunology; Protozoan Infections, Animal / immunology; Protozoan Infections, Animal / parasitology; Protozoan Infections, Animal / prevention & control; Protozoan Proteins / genetics; Protozoan Proteins / immunology; Protozoan Vaccines / genetics; Protozoan Vaccines / immunology; Recombinant Proteins / genetics; Recombinant Proteins / immunology; Synteny; Theileria parva / genetics; Theileria parva / immunology
TL;DR: Comparative genomics is used to computationally and experimentally interpret the C. felis genome to identify a novel candidate vaccine antigen for cytauxzoonosis, and this approach emphasizes the use of comparative genomics as an accelerated path to developing vaccines against experimentally intractable pathogens. (via Semantic Scholar)
Sources: Web Of Science, ORCID
Added: August 6, 2018

2013 journal article

The red clover necrotic mosaic virus capsid protein N-terminal amino acids possess specific RNA binding activity and are required for stable virion assembly

VIRUS RESEARCH, 176(1-2), 107–118.

By: S. Park*, T. Sit n, K. Kim n & S. Lommel n

author keywords: RCNMV; Virus assembly; RNA-CP interactions; TABS; TA; Co-packaging
MeSH headings : Capsid Proteins / genetics; Capsid Proteins / metabolism; DNA Mutational Analysis; RNA-Binding Proteins / genetics; RNA-Binding Proteins / metabolism; Sequence Deletion; Tombusviridae / genetics; Tombusviridae / physiology; Virion / metabolism; Virus Assembly
TL;DR: The N-terminal region of the CP is involved in both producing two virion populations due to its RNA binding properties and virion stability and was indispensable for stable virion formation and the region spanning CP residues 5-15 is required for systemic movement. (via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger (Web of Science)
13. Climate Action (Web of Science)
Source: Web Of Science
Added: August 6, 2018

2013 review

Reactive Oxygen Species in Plant Pathogenesis: The Role of Perylenequinone Photosensitizers

[Review of ]. ANTIOXIDANTS & REDOX SIGNALING, 19(9), 970–989.

By: M. Daub n, S. Herrero n & K. Chung*

MeSH headings : Apoptosis; Host-Pathogen Interactions; Necrosis; Oxidation-Reduction; Perylene / analogs & derivatives; Perylene / metabolism; Photosensitizing Agents / metabolism; Plant Diseases / etiology; Plant Diseases / genetics; Plant Diseases / microbiology; Plants / genetics; Plants / metabolism; Quinones / metabolism; Reactive Oxygen Species / metabolism
TL;DR: Recent studies show commonalities between resistance mechanisms in perylenequinone-producing fungi with extensive studies of ¹O₂ and oxidative stress responses in photosynthetic organisms, which hold promise both for improved medical use and for engineering crop plants for disease resistance. (via Semantic Scholar)
UN Sustainable Development Goal Categories
Source: Web Of Science
Added: August 6, 2018

2013 journal article

Partial cytogenetic response with toceranib and prednisone treatment in a young dog with chronic monocytic leukemia

ANTI-CANCER DRUGS, 24(10), 1098–1103.

By: M. Perez, S. Culver*, J. Owen*, M. Dunbar*, K. Kow, M. Breen n, R. Milner*

author keywords: cytogenetic analysis; fluorescence in-situ hybridization; monocytosis; toceranib; tyrosine kinase inhibitor
MeSH headings : Animals; Antineoplastic Combined Chemotherapy Protocols / administration & dosage; Antineoplastic Combined Chemotherapy Protocols / therapeutic use; Cell Proliferation / drug effects; Dog Diseases / drug therapy; Dog Diseases / genetics; Dogs; Female; Fusion Proteins, bcr-abl / antagonists & inhibitors; Fusion Proteins, bcr-abl / genetics; In Situ Hybridization, Fluorescence; Indoles / administration & dosage; Indoles / therapeutic use; Leukemia, Myeloid / drug therapy; Leukemia, Myeloid / genetics; Leukemia, Myeloid / pathology; Leukemia, Myeloid / veterinary; Prednisone / administration & dosage; Prednisone / therapeutic use; Pyrroles / administration & dosage; Pyrroles / therapeutic use; Translocation, Genetic; Treatment Outcome
TL;DR: A case of CMoL in a young dog that achieved clinical remission with treatment with the tyrosine kinase inhibitor toceranib and prednisone is reported. (via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being (Web of Science; OpenAlex)
Source: Web Of Science
Added: August 6, 2018

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