Works Published in 2008
Displaying works 61 - 80 of 163 in total
Sorted by most recent date added to the index first, which may not be the same as publication date order.
2008 journal article
Chewing muscle size and diet in Eocene adapines
American Journal of Physical Anthropology, 170–171. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000253342000502&KeyUID=WOS:000253342000502
Contributors: J. Perry & A. Hartstone-Rose
Source: ORCID
Added: September 12, 2019
2008 journal article
Incipient speciation within a subgenus of rockfish (Sebastosomus) provides evidence of recent radiations within an ancient species flock
Marine Biology, 154(4), 701–717.
TL;DR:
Evidence of ongoing speciation within the rockfish genus Sebastes is provided and stages of this process from incipient to distinct species are revealed.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
14. Life Below Water
(OpenAlex)
Source: ORCID
Added: September 11, 2019
2008 journal article
Fine scale dispersal in Banggai Cardinalfish, Pterapogon kauderni, a coral reef species lacking a pelagic larval phase
Marine Genomics, 1(3-4), 129–134.
author keywords: Pterapogon kauderni; Banggai Cardinalfish; Marine dispersal; Microsatellites
TL;DR:
The Banggai Cardinalfish, Pterapogon kauderni, a mouthbrooding species that lacks a pelagic larval phase is focused on, and data show consistency between small and large-scale dispersal.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
14. Life Below Water
(OpenAlex)
Source: ORCID
Added: September 11, 2019
2008 journal article
An Evaluation of Information Content as a Metric for the Inference of Putative Conserved Noncoding Regions in DNA Sequences Using a Genetic Algorithms Approach
IEEE/ACM Transactions on Computational Biology and Bioinformatics, 5(1), 1–14.
author keywords: evolutionary computing; genetic algorithms; biology; genetics
MeSH headings : Algorithms; Animals; Base Sequence; Computational Biology / methods; Confidence Intervals; Conserved Sequence / genetics; Cystic Fibrosis Transmembrane Conductance Regulator / genetics; Enhancer Elements, Genetic / genetics; Glutathione Transferase / genetics; Humans; Models, Genetic; Regulatory Sequences, Nucleic Acid / genetics; Sequence Alignment; Sequence Analysis, DNA / methods; Sex-Determining Region Y Protein / genetics
TL;DR:
Results indicate that IC does not identify highly conserved regions and, thus, is not the appropriate metric for this task, whereas variations on IC, as well as the original metric, succeed in identifying putative Conserved regions.
(via Semantic Scholar)
Sources: Crossref, ORCID
Added: August 10, 2019
2008 journal article
The Comparative Toxicogenomics Database facilitates identification and understanding of chemical-gene-disease associations: arsenic as a case study
BMC Medical Genomics, 1(1).
TL;DR:
Analysis of curated data for the chemical arsenic provides insight into the biological functions and molecular networks affected by exposure to arsenic, including stress response, apoptosis, cell cycle, and specific protein signaling pathways.
(via Semantic Scholar)
bmcmedgenomics.biomedcentral.com (publisher PDF)
Sources: Crossref, ORCID
Added: August 10, 2019
2008 journal article
Statistical Methods for Mapping Multiple QTL
International Journal of Plant Genomics, 2008, 1–8.
TL;DR:
This article focuses the discussion on the statistical methods for mapping multiple QTL by maximum likelihood and Bayesian methods and also on determining appropriate thresholds for the analysis.
(via Semantic Scholar)
Source: Crossref
Added: July 20, 2019
2008 journal article
Genetic basis for adverse events after smallpox vaccination.
Journal of Infectious Diseases, 198(1), 16–22.
Contributors: D. Reif* , B. McKinney *, A. Motsinger*, S. Chanock *, K. Edwards *, M. Rock*, J. Moore, J. Crowe Jr.
MeSH headings : Adult; Female; Genetic Predisposition to Disease; Genotype; Humans; Interferon Regulatory Factor-1 / genetics; Interleukin-4 / genetics; Male; Methylenetetrahydrofolate Reductase (NADPH2) / genetics; Polymorphism, Single Nucleotide; Smallpox Vaccine / adverse effects; Vaccination / adverse effects
TL;DR:
Genetic polymorphisms in genes expressing an enzyme previously associated with adverse reactions to a variety of pharmacologic agents (MTHFR) and an immunological transcription factor (IRF1) were associated with AEs after smallpox vaccination in 2 independent study samples.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(OpenAlex)
Source: ORCID
Added: May 14, 2019
2008 journal article
Genetic basis for adverse events after smallpox vaccination (Journal of Infectious Diseases (2008) 198, (16-22))
Journal of Infectious Diseases, 198(5).
Contributors: D. Reif , B. McKinney & A. Motsinger
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(OpenAlex)
Source: ORCID
Added: May 14, 2019
2008 journal article
A comparison of analytical methods for genetic association studies
Genet. Epidemiol., 32(8), 767â778.
Contributors: A. Motsinger-Reif n, D. Reif* , T. Fanelli* & M. Ritchie *
author keywords: genetic association study; epistasis; multifactor dimensionality reduction; grammatical evolution neural networks; focused interaction testing framework
MeSH headings : Data Interpretation, Statistical; Epistasis, Genetic; Genetic Linkage; Genetic Techniques; Genome; Humans; Models, Genetic; Models, Statistical; Models, Theoretical; Neural Networks, Computer; Phenotype; Probability; Regression Analysis; Software
TL;DR:
This study compares the performance of six analytical approaches to detect both main effects and gene‐gene interactions in a range of genetic models and demonstrates the strengths and weaknesses of each and illustrates the importance of continued methods development.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
15. Life on Land
(OpenAlex)
Source: ORCID
Added: May 14, 2019
2008 conference paper
A balanced accuracy fitness function leads to robust analysis using grammatical evolution neural networks in the case of class imbalance
Proceedings of the 10th annual conference on Genetic and evolutionary computation - GECCO '08, 353–354.
Contributors: N. Hardison n, D. Reif* , T. Fanelli*, M. Ritchie *, S. Dudek * & A. Motsinger-Reif n
TL;DR:
It is shown that when using classification error, class imbalance greatly decreases the power of GENN, and balanced error has replaced classification error in the GENN algorithm.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(OpenAlex)
Source: ORCID
Added: May 14, 2019
2008 article
EFFECTS OF VEGETATION AND BACKGROUND NOISE ON THE DETECTION PROCESS IN AUDITORY AVIAN POINT-COUNT SURVEYS (vol 125, pg 500, 2008)
Pacific, K., Simons, T. R., & Pollock, K. H. (2008, October). AUK, Vol. 125, pp. 998–998.
UN Sustainable Development Goal Categories
13. Climate Action
(Web of Science)
14. Life Below Water
(Web of Science)
15. Life on Land
(Web of Science)
Source: Web Of Science
Added: August 6, 2018
2008 journal article
Magnetic resonance imaging of live freshwater mussels (Unionidae)
INVERTEBRATE BIOLOGY, 127(4), 396–402.
author keywords: MRI; morphology; bivalve; soft tissue; unionid
TL;DR:
This study clarifies the body plan of unionid mussels and demonstrates the efficacy of magnetic resonance imaging technology for in vivo evaluation of the structure, function, and integrity of mussel soft tissues.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
14. Life Below Water
(Web of Science; OpenAlex)
15. Life on Land
(Web of Science)
Sources: Web Of Science, ORCID
Added: August 6, 2018
2008 review
Disrupted female reproductive physiology following neonatal exposure to phytoestrogens or estrogen specific ligands is associated with decreased GnRH activation and kisspeptin fiber density in the hypothalamus
[Review of ]. NEUROTOXICOLOGY, 29(6), 988–997.
author keywords: Genistein; Equal; Soy; Isoflavones; Gonadotropin; Puberty; Development; Endocrine disruption; DPN; PPT
MeSH headings : Analysis of Variance; Animals; Animals, Newborn; Estradiol / analogs & derivatives; Estradiol / pharmacology; Estrous Cycle / drug effects; Female; Gonadotropin-Releasing Hormone / metabolism; Hypothalamus / drug effects; Kisspeptins; Nerve Fibers / metabolism; Phenols / pharmacology; Proteins / metabolism; Pyrazoles / pharmacology; Rats; Receptors, Estrogen / agonists; Reproductive Physiological Phenomena / drug effects
TL;DR:
The data suggest that neonatal exposure to EDCs can suppress GnRH activity in adulthood, and that ERalpha plays a pivotal role in this process.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science; OpenAlex)
Sources: Web Of Science, ORCID
Added: August 6, 2018
2008 article
A solvatochromatic approach to quantifying formulation effects on dermal permeability
SAR AND QSAR IN ENVIRONMENTAL RESEARCH, Vol. 19, pp. 615–630.
author keywords: mixtures; skin; membrane-coated fiber; solvation energy
MeSH headings : Animals; Ethanol / metabolism; Models, Theoretical; Permeability / drug effects; Phenol / metabolism; Skin Physiological Phenomena; Solvents / metabolism; Swine; Toxicology / methods; Water / metabolism
TL;DR:
This research demonstrated that formulation-specific strength coefficients predicted changes in the dermal permeability of phenolic compounds when formulated with commercial metal-working fluid formulations or 50% ethanol and that these effects can be modeled within the context of a linear solvation energy relationship (LSER).
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
Source: Web Of Science
Added: August 6, 2018
2008 review
The superorganism the beauty, elegance, and strangeness of insect societies
[Review of ]. Science, 322(5906), 1327–1327.
Source: NC State University Libraries
Added: August 6, 2018
2008 journal article
TAK1-binding Protein 1, TAB1, Mediates Osmotic Stress-induced TAK1 Activation but Is Dispensable for TAK1-mediated Cytokine Signaling
JOURNAL OF BIOLOGICAL CHEMISTRY, 283(48), 33080–33086.
MeSH headings : Adaptor Proteins, Signal Transducing / genetics; Adaptor Proteins, Signal Transducing / metabolism; Animals; Cell Line; Cytokines / metabolism; Embryo, Mammalian / cytology; Embryo, Mammalian / metabolism; Enzyme Activation / physiology; Fibroblasts / cytology; Fibroblasts / metabolism; MAP Kinase Kinase Kinases / genetics; MAP Kinase Kinase Kinases / metabolism; Mice; Mice, Knockout; Osmotic Pressure / physiology; Protein Structure, Tertiary / physiology; Signal Transduction / physiology
TL;DR:
It is found that TAK1 is spontaneously activated when the concentration is increased and that it is totally dependent on TAB1, and that the C-terminal 68 amino acids of TAB 1 were sufficient to mediate osmotic stress-induced TAK 1 activation.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
Source: Web Of Science
Added: August 6, 2018
2008 journal article
Quantitative Trait Loci Mapping and The Genetic Basis of Heterosis in Maize and Rice
GENETICS, 180(3), 1707–1724.
MeSH headings : Chromosome Mapping; Crosses, Genetic; Epistasis, Genetic; Hybrid Vigor / genetics; Models, Genetic; Oryza / genetics; Quantitative Trait Loci; Zea mays / genetics
TL;DR:
The results show that heterosis in maize is mainly due to dominant gene action, although overdominance of individual QTL could not completely be ruled out due to the mapping resolution and limitations of NC design III.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger
(Web of Science; OpenAlex)
13. Climate Action
(Web of Science)
15. Life on Land
(Web of Science)
Source: Web Of Science
Added: August 6, 2018
2008 journal article
Determination of brevetoxin in recent marine sediments
CHEMOSPHERE, 73(8), 1373–1377.
Contributors: W. Mendoza*, R. Mead*, L. Brand & D. Shea n
author keywords: Brevetoxin; Harmful algal bloom; Biomarker; Sediments; Red tide; Gulf of Mexico
MeSH headings : Animals; Dinoflagellida / metabolism; Food Chain; Geologic Sediments / chemistry; Marine Toxins / analysis; Marine Toxins / biosynthesis; Marine Toxins / chemistry; Marine Toxins / isolation & purification; Oceans and Seas; Oxocins / analysis; Oxocins / chemistry; Oxocins / isolation & purification; Spectrometry, Mass, Electrospray Ionization
TL;DR:
The results from LC-ESI-MS-MS analyses of brevetoxin analogs detected in surficial sediments from three sites along the Southwest Florida coastline with prior HAB history are promising.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
14. Life Below Water
(Web of Science; OpenAlex)
Sources: Web Of Science, ORCID, NC State University Libraries
Added: August 6, 2018
2008 journal article
Convergent Evolution in the Genetic Basis of Mullerian Mimicry in Heliconius Butterflies
GENETICS, 180(3), 1567–1577.
MeSH headings : Adaptation, Biological / genetics; Amplified Fragment Length Polymorphism Analysis; Animals; Biomimetics; Body Patterning; Butterflies / physiology; Chromosome Mapping; Chromosomes, Artificial, Bacterial; Crosses, Genetic; Evolution, Molecular; Genes, Insect; Genetic Drift; Genetic Linkage; Genetic Markers; Genetic Variation; Phenotype; Predatory Behavior; Selection, Genetic; Wings, Animal / anatomy & histology; Wings, Animal / physiology
TL;DR:
Comparative genetic mapping shows red wing color loci are in homologous regions of the genome of H. erato and H. melpomene and implies they evolved independently using somewhat different developmental routes, but are nonetheless regulated by the same switch locus.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
15. Life on Land
(Web of Science; OpenAlex)
Source: Web Of Science
Added: August 6, 2018
2008 journal article
Basing population genetic inferences and models of molecular evolution upon desired stationary distributions of DNA or protein sequences
PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES, 363(1512), 3931–3939.
author keywords: variable-length Markov model; profile hidden Markov model; insertion-deletion model; scaled selection coefficient; fitness; Pfam
MeSH headings : Computer Simulation; DNA / genetics; Evolution, Molecular; Genetics, Population; INDEL Mutation / genetics; Markov Chains; Models, Genetic; Population Density; Proteins / genetics; Selection, Genetic
TL;DR:
This work explores how to construct time-reversible evolutionary models that yield stationary distributions of sequences that match given target distributions, and introduces an insertion–deletion model that describes selectively neutral evolutionary changes to DNA.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
15. Life on Land
(Web of Science)
Source: Web Of Science
Added: August 6, 2018
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