Synthetic and Systems Biology - 2019

Midkiff, D., & Miguel, A. S. (2019). Microfluidic Technologies for High Throughput Screening Through Sorting and On-Chip Culture of <i>C. elegans</i>. Molecules. https://doi.org/10.3390/molecules24234292

Buckner, E., Madison, I., Chou, H., Matthiadis, A., Melvin, C. E., Sozzani, R., … Long, T. A. (2019). Automated Imaging, Tracking, and Analytics Pipeline for Differentiating Environmental Effects on Root Meristematic Cell Division. Frontiers in Plant Science, 10. https://doi.org/10.3389/fpls.2019.01487

Mischler, A., Karakis, V., San Miguel, A., & Rao, B. (2019, August). DERIVATION OF HUMAN TROPHOBLAST STEM CELLS FROM HUMAN PLURIPOTENT STEM CELLS. PLACENTA, Vol. 83, pp. E59–E59. https://doi.org/10.1016/j.placenta.2019.06.193

Juarez, C. A., Ramey, R., Flaherty, D. T., & Akpa, B. S. (2019). Oxygen and hydrogen isotopes in human hair and tap water: Modeling relationships in a modern Mexican population. Human Biology, 90(3), 197–211. https://doi.org/10.13110/humanbiology.90.3.04

Spurney, R. J., Broeck, L., Clark, N. M., Fisher, A. P., Luis Balaguer, M. A., & Sozzani, R. (2019). tuxnet: a simple interface to process RNA sequencing data and infer gene regulatory networks. PLANT JOURNAL. https://doi.org/10.1111/tpj.14558

Day, K., Prodromou, R., Bosari, S. S., Lavoie, A., Omary, M., Market, C., … Menegatti, S. (2019). Discovery and Evaluation of Peptide Ligands for Selective Adsorption and Release of Cas9 Nuclease on Solid Substrates. BIOCONJUGATE CHEMISTRY, 30(12), 3057–3068. https://doi.org/10.1021/acs.bioconjchem.9b00703

Clark, N. M., Buckner, E., Fisher, A. P., Nelson, E. C., Nguyen, T. T., Simmons, A. R., … Sozzani, R. (2019). Stem-cell-ubiquitous genes spatiotemporally coordinate division through regulation of stem-cell-specific gene networks. NATURE COMMUNICATIONS, 10. https://doi.org/10.1038/s41467-019-13132-2

Barbera, N., Ayee, M. A., Akpa, B. S., & Levitan, I. (2019). Molecular Dynamics Simulations of Kir2.2 and Cholesterol Reveal State- and Concentration-Dependent Binding Sites. Biophysical Journal, 116(3), 41a. https://doi.org/10.1016/J.BPJ.2018.11.266

Leebens-Mack, J. H., Barker, M. S., Carpenter, E. J., Deyholos, M. K., Gitzendanner, M. A., Graham, S. W., … Wong, G. K.-S. (2019). One thousand plant transcriptomes and the phylogenomics of green plants. NATURE, 574(7780), 679-+. https://doi.org/10.1038/s41586-019-1693-2

Vallarino, J. G., Merchante, C., Sánchez‐Sevilla, J. F., Luis Balaguer, M. A., Pott, D. M., Ariza, M. T., … Osorio, S. (2019). Characterizing the involvement of
            FaMADS9
            in the regulation of strawberry fruit receptacle development. Plant Biotechnology Journal, 18(4), 929–943. https://doi.org/10.1111/pbi.13257

Lai, Y.-C., Karam, A. L., Sederoff, H. W., Ducoste, J. J., & Reyes, III. (2019). Relating nitrogen concentration and light intensity to the growth and lipid accumulation of Dunaliella viridis in a photobioreactor. Journal of Applied Phycology, 31(6), 3397–3409. https://doi.org/10.1007/s10811-019-01897-4

Powers, S. K., Holehouse, A. S., Korasick, D. A., Schreiber, K. H., Clark, N. M., Jing, H., … Strader, L. C. (2019). Nucleo-cytoplasmic Partitioning of ARF Proteins Controls Auxin Responses in Arabidopsis thaliana. MOLECULAR CELL, 76(1), 177-+. https://doi.org/10.1016/j.molcel.2019.06.044

Liao, C., Ttofali, F., Slotkowski, R. A., Denny, S. R., Cecil, T. D., Leenay, R. T., … Beisel, C. L. (2019). Modular one-pot assembly of CRISPR arrays enables library generation and reveals factors influencing crRNA biogenesis. NATURE COMMUNICATIONS, 10. https://doi.org/10.1038/s41467-019-10747-3

Tomek, K. J., Volkel, K., Simpson, A., Hass, A. G., Indermaur, E. W., Tuck, J. M., & Keung, A. J. (2019). Driving the Scalability of DNA-Based Information Storage Systems. ACS SYNTHETIC BIOLOGY, 8(6), 1241–1248. https://doi.org/10.1021/acssynbio.9b00100

Saberi-Bosari, S., Omary, M., Lavoie, A., Prodromou, R., Day, K., Menegatti, S., & San-Miguel, A. (2019). Affordable Microfluidic Bead-Sorting Platform for Automated Selection of Porous Particles Functionalized with Bioactive Compounds. SCIENTIFIC REPORTS, 9(1). https://doi.org/10.1038/s41598-019-42869-5

Di Mambro, R., Svolacchia, N., Dello Ioio, R., Pierdonati, E., Salvi, E., Pedrazzini, E., … Sabatini, S. (2019). The Lateral Root Cap Acts as an Auxin Sink that Controls Meristem Size. CURRENT BIOLOGY, 29(7), 1199-+. https://doi.org/10.1016/j.cub.2019.02.022

Smet, W., Sevilem, I., Luis Balaguer, M. A., Wybouw, B., Mor, E., Miyashima, S., … De Rybel, B. (2019). DOF2.1 Controls Cytokinin-Dependent Vascular Cell Proliferation Downstream of TMO5/LHW. CURRENT BIOLOGY, 29(3), 520-+. https://doi.org/10.1016/j.cub.2018.12.041

Miyashima, S., Roszak, P., Sevilem, I., Toyokura, K., Blob, B., Heo, J.-ok, … Helariutta, Y. (2019). Mobile PEAR transcription factors integrate hormone and miRNA cues to prime cambial growth. Nature, 565(7740), 490–494. https://doi.org/10.1038/s41586-018-0839-y

Haque, S., Ahmad, J. S., Clark, N. M., Williams, C. M., & Sozzani, R. (2019). Computational prediction of gene regulatory networks in plant growth and development. Current Opinion in Plant Biology, 47, 96–105. https://doi.org/10.1016/j.pbi.2018.10.005

Park, M., Patel, N., Keung, A. J., & Khalil, A. S. (2019). Engineering Epigenetic Regulation Using Synthetic Read-Write Modules. CELL, 176(1-2), 227-+. https://doi.org/10.1016/j.cell.2018.11.002