Works Published in 2021

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Displaying works 1 - 20 of 29 in total

Sorted by most recent date added to the index first, which may not be the same as publication date order.

2021 article

Identifying C. elegans Lifespan Mutants by Screening for Early-Onset Protein Aggregation

Midkiff, D. F., & San-Miguel, A. (2021, December 16).

By: D. Midkiff n & A. San-Miguel n

co-author countries: United States of America 🇺🇸
Source: ORCID
Added: May 31, 2023

2021 article

Endogenous DAF-16 Spatiotemporal Activity Quantitatively Predicts Lifespan Extension Induced by Dietary Restriction

Huayta, J., & San-Miguel, A. (2021, December 21).

co-author countries: United States of America 🇺🇸
Source: ORCID
Added: May 31, 2023

2021 journal article

Antagonistic effects of chemical mixtures on the oxidative stress response are silenced by heat stress and reversed under dietary restriction

Exposome, 1(1).

co-author countries: United States of America 🇺🇸
Source: ORCID
Added: May 31, 2023

2021 article

Antagonistic effects of chemical mixtures on the oxidative stress response are silenced by heat stress and reversed under dietary restriction

Arulalan, K. S., Huayta, J., Stallrich, J. W., & San-Miguel, A. (2021, March 19).

co-author countries: United States of America 🇺🇸
Source: ORCID
Added: May 31, 2023

2021 chapter

Microfluidic devices for imaging and manipulation of C. elegans

In Micro and Nano Systems for Biophysical Studies of Cells and Small Organisms (pp. 295–321).

co-author countries: United States of America 🇺🇸
Source: ORCID
Added: May 31, 2023

2021 journal article

Cell-by-cell dissection of phloem development links a maturation gradient to cell specialization

SCIENCE, 374(6575), 1577-+.

co-author countries: Belgium 🇧🇪 Germany 🇩🇪 Finland 🇫🇮 United Kingdom of Great Britain and Northern Ireland 🇬🇧 Japan 🇯🇵 Netherlands 🇳🇱 Poland 🇵🇱 Sweden 🇸🇪 United States of America 🇺🇸
MeSH headings : Arabidopsis / cytology; Arabidopsis / genetics; Arabidopsis / metabolism; Arabidopsis Proteins / genetics; Arabidopsis Proteins / metabolism; Cell Differentiation; GTP-Binding Proteins / genetics; GTP-Binding Proteins / metabolism; Meristem / cytology; Phloem / cytology; Phloem / genetics; Phloem / growth & development; Phloem / metabolism; Plant Roots / cytology; Plant Roots / genetics; Plant Roots / growth & development; Plant Roots / metabolism; RNA-Seq; Signal Transduction; Single-Cell Analysis; Transcription Factors / genetics; Transcription Factors / metabolism; Transcriptome
Sources: Web Of Science, ORCID
Added: February 7, 2022

2021 journal article

Mapping the dynamic transfer functions of eukaryotic gene regulation

CELL SYSTEMS, 12(11), 1079-+.

By: J. Lee*, L. Caywood*, J. Lo, N. Levering & A. Keung*

MeSH headings : Chromatin / genetics; Eukaryota / genetics; Gene Expression Regulation / genetics; Promoter Regions, Genetic / genetics; Signal Transduction
Source: Web Of Science
Added: January 31, 2022

2021 journal article

Mapping the residue specificities of epigenome enzymes by yeast surface display

CELL CHEMICAL BIOLOGY, 28(12), 1772-+.

By: A. Waldman n, B. Rao n & A. Keung n

co-author countries: United States of America 🇺🇸
MeSH headings : E1A-Associated p300 Protein / genetics; E1A-Associated p300 Protein / metabolism; Epigenome / genetics; Humans; Saccharomyces cerevisiae / metabolism
Source: Web Of Science
Added: January 3, 2022

2021 article

Epigenetic modification associated with climate regulates betulin biosynthesis in birch

Wang, J., Chen, B., Ali, S., Zhang, T., Wang, Y., Zhang, H., … Zhang, Q. (2021, December 4). JOURNAL OF FORESTRY RESEARCH, Vol. 12.

By: J. Wang*, B. Chen*, S. Ali*, T. Zhang*, Y. Wang*, H. Zhang*, L. Wang*, Y. Zhang* ...

co-author countries: China 🇨🇳 India 🇮🇳 United States of America 🇺🇸
author keywords: Epigenetics; DNA methylation; Betulin; bHLH9 transcription factor; Hormesis; Climate change; Secondary metabolite
Sources: Web Of Science, ORCID
Added: December 13, 2021

2021 review

Solving the puzzle of Fe homeostasis by integrating molecular, mathematical, and societal models

[Review of ]. CURRENT OPINION IN PLANT BIOLOGY, 64.

By: C. Hodgens n, B. Akpa* & T. Long n

co-author countries: United States of America 🇺🇸
author keywords: Iron homeostasis; Simulation-based inference (SBI); Inclusivity
MeSH headings : Biological Transport; Gene Expression Regulation, Plant; Homeostasis; Iron / metabolism; Plants / genetics; Plants / metabolism
Sources: ORCID, Web Of Science
Added: November 27, 2021

2021 journal article

Integrated omics networks reveal the temporal signaling events of brassinosteroid response in Arabidopsis

NATURE COMMUNICATIONS, 12(1).

co-author countries: United States of America 🇺🇸
MeSH headings : Arabidopsis / metabolism; Arabidopsis Proteins / genetics; Arabidopsis Proteins / metabolism; Brassinosteroids / metabolism; Cell Division; DNA-Binding Proteins / genetics; DNA-Binding Proteins / metabolism; Gene Expression Regulation, Plant; Nuclear Proteins / metabolism; Plant Growth Regulators / metabolism; Protein Kinases / genetics; Protein Kinases / metabolism; Proteomics; Seedlings / metabolism; Signal Transduction; Steroids, Heterocyclic; Transcription Factors / metabolism
Sources: Web Of Science, ORCID
Added: October 26, 2021

2021 journal article

Effects of early geometric confinement on the transcriptomic profile of human cerebral organoids

BMC BIOTECHNOLOGY, 21(1).

co-author countries: United States of America 🇺🇸
author keywords: Human cerebral organoids; Neurodevelopment; Agarose microwells; Microfabrication; RNAseq; Mechanobiology
MeSH headings : Brain; Cell Differentiation; Gene Expression Profiling; Humans; Organoids; Transcriptome
Source: Web Of Science
Added: October 26, 2021

2021 article

Spatiotemporal Gene Expression Profiling and Network Inference: A Roadmap for Analysis, Visualization, and Key Gene Identification

MODELING TRANSCRIPTIONAL REGULATION, Vol. 2328, pp. 47–65.

co-author countries: United States of America 🇺🇸
author keywords: Gene regulatory network inference; RNA sequencing; Bioinformatics; Network visualization
MeSH headings : Algorithms; Amino Acid Motifs / genetics; Cluster Analysis; Computational Biology / methods; Gene Expression Profiling / methods; Gene Expression Regulation / genetics; Gene Regulatory Networks / genetics; Multigene Family; RNA-Seq / methods; Software; Spatio-Temporal Analysis; Workflow
Sources: Web Of Science, ORCID
Added: October 4, 2021

2021 journal article

Two distinct trophectoderm lineage stem cells from human pluripotent stem cells

JOURNAL OF BIOLOGICAL CHEMISTRY, 296.

co-author countries: United States of America 🇺🇸
MeSH headings : CDX2 Transcription Factor / metabolism; Cell Culture Techniques; Cell Differentiation; Cell Lineage; Culture Media; Embryonic Stem Cells / cytology; Embryonic Stem Cells / metabolism; Female; Humans; Placenta / cytology; Placenta / metabolism; Pluripotent Stem Cells / cytology; Pluripotent Stem Cells / metabolism; Pregnancy; Trophoblasts / cytology; Trophoblasts / metabolism
Sources: Web Of Science, ORCID
Added: September 7, 2021

2021 review

An Overview of the Practices and Management Methods for Enhancing Seed Production in Conifer Plantations for Commercial Use

[Review of ]. HORTICULTURAE, 7(8).

co-author countries: China 🇨🇳 Sweden 🇸🇪 United States of America 🇺🇸
author keywords: conifers; flowering; seed production; pollination; phytohormones; tree management; nutrient fertilization
Sources: Web Of Science, ORCID
Added: September 7, 2021

2021 article

A bioinspired, passive microfluidic lobe filtration system

Clark, A. S., & San-Miguel, A. (2021, August 11). LAB ON A CHIP, Vol. 21.

co-author countries: United States of America 🇺🇸
MeSH headings : Filtration; Microfluidic Analytical Techniques; Microfluidics; Particle Size
Sources: Web Of Science, ORCID
Added: August 30, 2021

2021 article

Optogenetics gets the worm

San-Miguel, A. (2021, June 30). SCIENCE ROBOTICS, Vol. 6.

co-author countries: United States of America 🇺🇸
MeSH headings : Animals; Caenorhabditis elegans / genetics; Caenorhabditis elegans Proteins / genetics; Locomotion; Optogenetics
Sources: Web Of Science, ORCID
Added: August 16, 2021

2021 article

Predicting Inter-individual Variability During Lipid Resuscitation of Bupivacaine Cardiotoxicity in Rats: A Virtual Population Modeling Study

McDaniel, M., Flores, K. B., & Akpa, B. S. (2021, July 19). DRUGS IN R&D, Vol. 7.

By: M. McDaniel n, K. Flores n & B. Akpa n

co-author countries: United States of America 🇺🇸
MeSH headings : Anesthetics, Local / toxicity; Animals; Bupivacaine / toxicity; Cardiotoxicity; Lipids; Rats; Rats, Sprague-Dawley
Sources: ORCID, Web Of Science
Added: July 20, 2021

2021 journal article

Evaluation of UBE3A antibodies in mice and human cerebral organoids

SCIENTIFIC REPORTS, 11(1).

By: D. Sen n, Z. Drobna n & A. Keung n

co-author countries: United States of America 🇺🇸
MeSH headings : Angelman Syndrome / genetics; Angelman Syndrome / pathology; Animals; Antibodies / genetics; Antibodies / immunology; Autistic Disorder / genetics; Autistic Disorder / pathology; Cerebellum / cytology; Disease Models, Animal; Genomic Imprinting; Humans; Mice; Neural Stem Cells / metabolism; Neurons / metabolism; Neurons / pathology; Organoids / cytology; Pluripotent Stem Cells; Ubiquitin-Protein Ligases / genetics; Ubiquitin-Protein Ligases / immunology
Source: Web Of Science
Added: July 19, 2021

2021 journal article

Precise transcriptional control of cellular quiescence by BRAVO/WOX5 complex in Arabidopsis roots

MOLECULAR SYSTEMS BIOLOGY, 17(6).

By: I. Betegon-Putze*, J. Mercadal*, N. Bosch*, A. Planas-Riverola*, M. Marques-Bueno*, J. Vilarrasa-Blasi*, D. Frigola*, R. Burkart* ...

co-author countries: Germany 🇩🇪 Spain 🇪🇸 United States of America 🇺🇸
author keywords: BRAVO; mathematical modelling; quiescent centre; root growth; WOX5
MeSH headings : Arabidopsis / genetics; Arabidopsis / metabolism; Arabidopsis Proteins / genetics; Arabidopsis Proteins / metabolism; Cell Division; Gene Expression Regulation, Plant; Homeodomain Proteins / genetics; Meristem / genetics; Meristem / metabolism; Nitriles; Plant Roots / genetics; Plant Roots / metabolism
Sources: Web Of Science, ORCID
Added: July 12, 2021