Fungal Genomics Laboratory

NC State

Works Published in 2004

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Displaying all 11 works

Sorted by most recent date added to the index first, which may not be the same as publication date order.

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2004 journal article

Cloning, sequencing and functional analysis of Magnaporthe grisea MVP1 gene, a hex-1 homolog encoding a putative ‘woronin body’ protein

FEMS Microbiology Letters, 230(1), 85–90.

By: F. Asiegbu, W. Choi, J. Jeong & R. Dean* 

author keywords: appressorium; cDNA; gene disruption; Northern blotting; rice blast fungus
MeSH headings : Cloning, Molecular; Fungal Proteins / genetics; Fungal Proteins / metabolism; Gene Deletion; Gene Expression Regulation, Fungal; Magnaporthe / genetics; Magnaporthe / growth & development; Magnaporthe / metabolism; Magnaporthe / pathogenicity; Molecular Sequence Data; Oryza / microbiology; Plant Diseases / microbiology; Recombination, Genetic; Sequence Analysis, DNA
Sources: Crossref, ORCID
Added: August 28, 2020

2004 journal article

Protocol for DNA extraction from watermelon leaves for SSR marker studies

Report (Cucurbit Genetics Cooperative), (27), 25.

By: G. Gusmini, T. Wehner , T. Joobeur, R. Dean  & A. Levi

Source: NC State University Libraries
Added: August 6, 2018

2004 journal article

Gene discovery and gene expression in the rice blast fungus, Magnaporthe grisea: Analysis of expressed sequence tags

MOLECULAR PLANT-MICROBE INTERACTIONS, 17(12), 1337–1347.

By: D. Ebbole, Y. Jin, M. Thon*, H. Pan*, E. Bhattarai, T. Thomas, R. Dean* 

author keywords: plant pathogen
MeSH headings : Expressed Sequence Tags; Gene Expression Profiling; Gene Library; Genome, Fungal; Magnaporthe / genetics; Multigene Family; Oryza / microbiology
Sources: Web Of Science, ORCID
Added: August 6, 2018

2004 journal article

The fusarium wilt resistance locus Fom-2 of melon contains a single resistance gene with complex features

PLANT JOURNAL, 39(3), 283–297.

By: T. Joobeur*, J. King, S. Nolin*, C. Thomas & R. Dean* 

author keywords: Fom-2; melon; complex R locus; fine mapping; BAC end sequence; R gene evolution
MeSH headings : Alleles; Amino Acid Sequence; Base Sequence; Chromosome Mapping; Cucumis melo / genetics; Cucumis melo / microbiology; DNA Primers / genetics; DNA, Plant / genetics; Evolution, Molecular; Fusarium / pathogenicity; Gene Conversion; Genes, Plant; Molecular Sequence Data; Plant Diseases / genetics; Plant Diseases / microbiology; Plant Proteins / chemistry; Plant Proteins / genetics; Polymorphism, Genetic; Recombination, Genetic; Selection, Genetic
Sources: Web Of Science, ORCID
Added: August 6, 2018

2004 journal article

Insight into Trichoderma reesei's genome content, organization and evolution revealed through BAC library characterization

FUNGAL GENETICS AND BIOLOGY, 41(12), 1077–1087.

By: S. Diener n, M. Chellappan n, T. Mitchell n, N. Dunn-Coleman, M. Ward & R. Dean n 

author keywords: Trichoderma reesei; bacterial artificial chromosome (BAC); physical map; genome organization; secretion; biomass degradation; repetitive element
MeSH headings : Chromosome Mapping; Chromosomes, Artificial, Bacterial; Contig Mapping; DNA Fingerprinting; DNA Transposable Elements / genetics; DNA, Fungal / chemistry; DNA, Fungal / genetics; DNA, Fungal / isolation & purification; Fungal Proteins / genetics; Fungal Proteins / physiology; Genome, Fungal; Genomic Library; Molecular Sequence Data; Nucleic Acid Hybridization; Podospora / genetics; Polymorphism, Restriction Fragment Length; Sequence Analysis, DNA; Sequence Homology; Trichoderma / enzymology; Trichoderma / genetics
Sources: Web Of Science, ORCID
Added: August 6, 2018

2004 journal article

Identification of proteins that interact with two regulators of appressorium development, adenylate cyclase and cAMP-dependent protein kinase A, in the rice blast fungus Magnaporthe grisea

Molecular Genetics and Genomics, 270(6), 497–508.

By: R. Kulkarni n & R. Dean n 

MeSH headings : Adenylyl Cyclases / metabolism; Base Sequence; Cloning, Molecular; Cyclic AMP / physiology; Cyclic AMP-Dependent Protein Kinases / metabolism; DNA Primers; DNA, Complementary; Gene Library; Magnaporthe / enzymology; Magnaporthe / genetics; Magnaporthe / growth & development; Oryza / microbiology; Plant Diseases / microbiology; Plant Growth Regulators / pharmacology; Plant Proteins / metabolism; Restriction Mapping; Signal Transduction
Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2004 journal article

Robust-LongSAGE (RL-SAGE): A substantially improved LongSAGE method for gene discovery and transcriptome analysis

PLANT PHYSIOLOGY, 134(3), 890–897.

By: M. Gowda  n, C. Jantasuriyarat  n, R. Dean n  & G. Wang  n

MeSH headings : Base Sequence; Cloning, Molecular; DNA, Plant / genetics; Gene Expression Profiling / methods; Genes, Plant; Genome, Plant; Genomics / methods; Plant Diseases / genetics; RNA, Messenger / genetics; RNA, Plant / genetics
Sources: Web Of Science, ORCID
Added: August 6, 2018

2004 article

Characterization of the protein processing and secretion pathways in a comprehensive set of expressed sequence tags from Trichoderma reesei (vol 230, pg 275, 2004)

FEMS Microbiology Letters, Vol. 235, p. 209.

By: S. Diener n, N. Dunn-Coleman, P. Foreman, T. Houfek n, P. Teunissen, P. Solingen, L. Dankmeyer, T. Mitchell n, M. Ward, R. Dean n 

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2004 journal article

Cloning, sequencing and functional analysis of Magnaporthe grisea MVP1 gene, a hex-1 homolog encoding a putative 'woronin body' protein

FEMS Microbiology Letters, 230(1), 85–90.

By: F. Asiegbu, W. Choi, J. Jeong & R. Dean 

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2004 journal article

Characterization of the protein processing and secretion pathways in a comprehensive set of expressed sequence tags from Trichoderma reesei

FEMS MICROBIOLOGY LETTERS, 230(2), 275–282.

By: S. Diener n, N. Dunn-Coleman, P. Foreman, T. Houfek n, P. Teunissen, P. Solingen, L. Dankmeyer, T. Mitchell n, M. Ward, R. Dean n 

author keywords: secretion; protein processing; Trichoderma reesei; expressed sequence tag
MeSH headings : Computational Biology; Expressed Sequence Tags; Fungal Proteins / genetics; Fungal Proteins / metabolism; Gene Library; Protein Processing, Post-Translational; Protein Transport; Sequence Analysis, DNA; Trichoderma / genetics
Sources: Web Of Science, ORCID
Added: August 6, 2018

2004 journal article

BAC end sequences and a physical map reveal transposable element content and clustering patterns in the genome of Magnaporthe grisea

FUNGAL GENETICS AND BIOLOGY, 41(7), 657–666.

By: M. Thon n, S. Martin n, S. Goff*, R. Wing * & R. Dean n 

author keywords: transposon; transposable element; rice blast; Magnaporthe grisea; Pyricularia grisea; BAC library; physical map
MeSH headings : Chromosomes, Artificial, Bacterial; Chromosomes, Fungal / genetics; DNA Transposable Elements; DNA, Fungal / genetics; Gene Library; Genome, Fungal; Magnaporthe / genetics; Physical Chromosome Mapping; Point Mutation / genetics; Recombination, Genetic; Repetitive Sequences, Nucleic Acid; Sequence Analysis, DNA
Sources: Web Of Science, ORCID
Added: August 6, 2018