Fungal Genomics Laboratory
NC State
Works Published in 2007
Displaying all 12 works
Sorted by most recent date added to the index first, which may not be the same as publication date order.
2007 review
From genes to genomes: A new paradigm for studying fungal pathogenesis in magnaporthe oryzae
[Review of ]. Fungal genomics, 57, 175–218.
Source: NC State University Libraries
Added: August 6, 2018
2007 article
What can comparative genomics tell us about species concepts in the genus Aspergillus?
STUDIES IN MYCOLOGY, pp. 11–17.
author keywords: comparative genomics; genetic diversity; genome sequences; identification of species boundaries
doi.org (publisher)
Sources: Web Of Science, ORCID
Added: August 6, 2018
2007 journal article
Trranscript profiling of a conifer pathosystem: response of Pinus sylvestris root tissues to pathogen (Heterobasidion annosum) invasion
TREE PHYSIOLOGY, 27(10), 1441–1458.
author keywords: antimicrobial peptide; microarray; peroxidase; phenylopropanoid pathway; pine; plant defence
MeSH headings : Fungi / physiology; Gene Expression Profiling; Gene Expression Regulation, Plant; Oligonucleotide Array Sequence Analysis; Pinus sylvestris / metabolism; Plant Diseases / microbiology; Plant Proteins / genetics; Plant Proteins / metabolism; Plant Roots / metabolism; Plant Roots / microbiology; Plant Roots / ultrastructure; Seedlings
Sources: Web Of Science, ORCID
Added: August 6, 2018
2007 journal article
Development of a high throughput transformation system for insertional mutagenesis in Magnaporthe oryzae
FUNGAL GENETICS AND BIOLOGY, 44(10), 1035–1049.
author keywords: Magnaporthe oryzae; Insertional mutagenesis; Agrobacterium tumefaciens-mediated transformation; CaCl2/PEG-mediated transformation; pathogenicity
MeSH headings : 3' Flanking Region; 5' Flanking Region; Agrobacterium tumefaciens / genetics; Magnaporthe / genetics; Mutagenesis, Insertional / methods; Phenotype; Protoplasts; Transformation, Genetic
Sources: Web Of Science, ORCID
Added: August 6, 2018
2007 journal article
Challenges in quantification of ligninolytic enzymes from Phanerochaete chrysosporium cultivation for pretreatment of cotton stalks
Transactions of the ASABE, 50(6), 2347–2354.
Sources: NC State University Libraries, ORCID
Added: August 6, 2018
2007 journal article
A systematic analysis of T-DNA insertion events in Magnaporthe oryzae
FUNGAL GENETICS AND BIOLOGY, 44(10), 1050–1064.
author keywords: agrobacterium-mediated transformation; insertional mutagenesis; inverse PCR
MeSH headings : 3' Flanking Region; 5' Flanking Region; Agrobacterium tumefaciens / genetics; Chromosomes, Fungal; DNA, Bacterial / analysis; DNA, Bacterial / genetics; Genome, Fungal; Magnaporthe / genetics; Mutagenesis, Insertional; Repetitive Sequences, Nucleic Acid; Transformation, Genetic
Sources: Web Of Science, ORCID
Added: August 6, 2018
2007 journal article
The evolutionary history of Cytochrome P450 genes in four filamentous Ascomycetes
BMC EVOLUTIONARY BIOLOGY, 7.
MeSH headings : Amino Acid Motifs; Amino Acid Sequence; Ascomycota / enzymology; Ascomycota / genetics; Aspergillus nidulans / enzymology; Aspergillus nidulans / genetics; Conserved Sequence; Cytochrome P-450 Enzyme System / genetics; Evolution, Molecular; Exons; Fusarium / enzymology; Fusarium / genetics; Gene Duplication; Genes, Fungal; Introns; Magnaporthe / enzymology; Magnaporthe / genetics; Multigene Family; Neurospora crassa / enzymology; Neurospora crassa / genetics; Phylogeny
Sources: Web Of Science, ORCID
Added: August 6, 2018
2007 journal article
The Fus3/Kss1 MAP kinase homolog Amk1 regulates the expression of genes encoding hydrolytic enzymes in Alternaria brassicicola
FUNGAL GENETICS AND BIOLOGY, 44(6), 543–553.
author keywords: necrotroph; pathogenicity factor; mitogen-activated protein kinase; gene disruptions; linear minimal element construct; alternaria
MeSH headings : Alternaria / enzymology; Alternaria / genetics; Alternaria / pathogenicity; Brassica / microbiology; Gene Expression Regulation, Fungal; Hydrolases / genetics; Hydrolysis; Mitogen-Activated Protein Kinases / genetics; Mitogen-Activated Protein Kinases / physiology; Plant Diseases / microbiology; Virulence / genetics
Source: Web Of Science
Added: August 6, 2018
2007 journal article
Expressed sequence tags from Phytophthora sojae reveal genes specific to development and infection
MOLECULAR PLANT-MICROBE INTERACTIONS, 20(7), 781–793.
author keywords: effectors
MeSH headings : Cluster Analysis; Expressed Sequence Tags; Gene Expression Profiling; Gene Library; Genes, Fungal; Molecular Sequence Data; Phytophthora / genetics; Phytophthora / growth & development; Sequence Analysis, DNA; Soybeans / microbiology
Sources: Web Of Science, ORCID
Added: August 6, 2018
2007 journal article
The Magnaporthe grisea snodprot1 homolog, MSPI, is required for virulence
FEMS MICROBIOLOGY LETTERS, 273(2), 157–165.
author keywords: rice blast; hydrophobin; pathogenicity; rice; infection
MeSH headings : Blotting, Western; Fungal Proteins / chemistry; Fungal Proteins / genetics; Fungal Proteins / physiology; Gene Deletion; Hordeum / microbiology; Magnaporthe / genetics; Magnaporthe / metabolism; Magnaporthe / pathogenicity; Molecular Sequence Data; Mutation; Recombinant Fusion Proteins / physiology; Sequence Alignment; Sequence Analysis, Protein; Virulence / genetics; Virulence Factors / chemistry; Virulence Factors / genetics; Virulence Factors / physiology
Sources: Web Of Science, ORCID
Added: August 6, 2018
2007 journal article
Magnaporthe grisea infection triggers RNA variation and antisense transcript expression in rice
PLANT PHYSIOLOGY, 144(1), 524–533.
MeSH headings : Base Sequence; Expressed Sequence Tags; Gene Expression Profiling; Gene Library; Genetic Variation; Immunity, Innate; Magnaporthe / physiology; Molecular Sequence Data; Oryza / genetics; Oryza / metabolism; Oryza / microbiology; Plant Diseases / genetics; Plant Diseases / microbiology; RNA, Antisense / metabolism; RNA, Messenger / metabolism; Sequence Analysis, RNA
Sources: Web Of Science, ORCID
Added: August 6, 2018
2007 article
Fungal gene clusters
Dean, R. A. (2007, January). NATURE BIOTECHNOLOGY, Vol. 25, pp. 67–67.
MeSH headings : Fungal Proteins / genetics; Fungal Proteins / metabolism; Gene Expression Profiling; Gene Expression Regulation, Fungal; Genes, Fungal / genetics; Genome, Fungal / genetics; Genomics; Multigene Family / genetics; Multigene Family / physiology; Ustilago / genetics; Ustilago / growth & development; Ustilago / pathogenicity; Virulence / genetics; Zea mays / microbiology
Sources: Web Of Science, ORCID
Added: August 6, 2018
