Fungal Genomics Laboratory

NC State

Works Published in 2008

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Displaying all 7 works

Sorted by most recent date added to the index first, which may not be the same as publication date order.

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2008 journal article

Sequence and genetic map of Meloidogyne hapla: A compact nematode genome for plant parasitism

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 105(39), 14802–14807.

By: C. Opperman n, D. Bird n , V. Williamson *, D. Rokhsar *, M. Burke n, J. Cohn n, J. Cromer n, S. Diener n ...

author keywords: compaction; dauer; development; horizontal gene transfer; gene
MeSH headings : Animals; Base Sequence; Caenorhabditis elegans / genetics; Chromosome Mapping; Evolution, Molecular; Gene Duplication; Gene Transfer, Horizontal; Genome, Helminth; Host-Parasite Interactions / genetics; Molecular Sequence Data; Multigene Family; Operon; Phylogeny; Plants / parasitology; Synteny; Tylenchoidea / genetics
Source: Web Of Science
Added: August 6, 2018

2008 journal article

The effect of temperature on Natural Antisense Transcript (NAT) expression in Aspergillus flavus

CURRENT GENETICS, 54(5), 241–269.

By: C. Smith*, D. Robertson n, B. Yates *, D. Nielsen n, D. Brown n, R. Dean n , G. Payne n

author keywords: Aspergillus flavus; Natural antisense transcripts (NATs); Temperature; Gene expression
MeSH headings : Aspergillus flavus / genetics; Aspergillus flavus / metabolism; Expressed Sequence Tags; Fungal Proteins / genetics; Fungal Proteins / metabolism; Gene Expression Regulation, Fungal; Genome, Fungal; RNA Precursors / metabolism; RNA, Antisense / metabolism; Temperature; Transcription, Genetic / genetics
Sources: Web Of Science, ORCID
Added: August 6, 2018

2008 article

Aspergillus flavus genomics as a tool for studying the mechanism of aflatoxin formation

FOOD ADDITIVES AND CONTAMINANTS PART A-CHEMISTRY ANALYSIS CONTROL EXPOSURE & RISK ASSESSMENT, Vol. 25, pp. 1152–1157.

By: J. Yu, G. Payne*, W. Nierman, M. Machida, J. Bennett, B. Campbell, J. Robens, D. Bhatnagar, R. Dean* , T. Cleveland

author keywords: aflatoxins; mycotoxins; toxigenic fungi; Aspergillus; genomics; expressed Sequence tags; microarrays; gene profiling
MeSH headings : Aflatoxins / biosynthesis; Aspergillus flavus / genetics; Aspergillus flavus / metabolism; Aspergillus oryzae / genetics; Gene Expression Profiling / methods; Genes, Fungal; Genome, Fungal; Genomics / methods; Genomics / trends; Multigene Family; Oligonucleotide Array Sequence Analysis / methods
Sources: Web Of Science, ORCID
Added: August 6, 2018

2008 journal article

Anastomosis is required for virulence of the fungal necrotroph Alternaria brassicicola

EUKARYOTIC CELL, 7(4), 675–683.

By: K. Craven n, H. Velez  n, Y. Cho*, C. Lawrence* & T. Mitchell n

MeSH headings : Alternaria / cytology; Alternaria / genetics; Alternaria / metabolism; Alternaria / pathogenicity; Base Sequence; Brassica / microbiology; Fungal Proteins / genetics; Fungal Proteins / metabolism; Genetic Complementation Test; Hyphae / metabolism; Molecular Sequence Data; Plant Diseases / microbiology; Virulence
Source: Web Of Science
Added: August 6, 2018

2008 review

Transcriptome analysis reveals new insight into appressorium formation and function in the rice blast fungus Magnaporthe oryzae

[Review of ]. GENOME BIOLOGY, 9(5).

By: Y. Oh n, N. Donofrio n, H. Pan n, S. Coughlan*, D. Brown n, S. Meng n, T. Mitchell n, R. Dean n 

MeSH headings : Cell Wall / chemistry; Cell Wall / metabolism; Fungal Proteins / genetics; Fungal Proteins / metabolism; Gene Expression Profiling; Gene Expression Regulation, Fungal; Lipid Metabolism; Magnaporthe / cytology; Magnaporthe / genetics; Magnaporthe / physiology; Signal Transduction; Spores, Fungal / cytology; Spores, Fungal / genetics
Sources: Web Of Science, ORCID
Added: August 6, 2018

2008 journal article

Altered patterns of gene duplication and differential gene gain and loss in fungal pathogens

BMC GENOMICS, 9.

By: A. Powell*, G. Conant *, D. Brown n, I. Carbone n  & R. Dean n 

MeSH headings : Computational Biology; Evolution, Molecular; Fungi / genetics; Fungi / pathogenicity; Gene Duplication; Genomics; Multigene Family / genetics; Sequence Homology
Sources: Web Of Science, ORCID
Added: August 6, 2018

2008 journal article

Expression of a harpin-encoding gene in rice confers durable nonspecific resistance to Magnaporthe grisea

PLANT BIOTECHNOLOGY JOURNAL, 6(1), 73–81.

By: M. Shao *, J. Wang *, R. Dean n , Y. Lin *, X. Gao * & S. Hu n 

author keywords: appressorium; defence-related genes; durable nonspecific resistance; hrf1 gene; Magnaporthe grisea; rice
MeSH headings : Bacterial Outer Membrane Proteins / genetics; Bacterial Outer Membrane Proteins / metabolism; Gene Expression; Host-Pathogen Interactions; Magnaporthe / immunology; Magnaporthe / physiology; Oryza / genetics; Oryza / immunology; Oryza / microbiology; Plant Diseases; Plant Leaves / metabolism; Silicon / metabolism; Xanthomonas / genetics
Sources: Web Of Science, ORCID
Added: August 6, 2018