Fungal Genomics Laboratory

NC State

Works Published in 2012

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Displaying all 6 works

Sorted by most recent date added to the index first, which may not be the same as publication date order.

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2012 journal article

Polyubiquitin Is Required for Growth, Development and Pathogenicity in the Rice Blast Fungus Magnaporthe oryzae

PLOS ONE, 7(8).

By: Y. Oh n, W. Franck n, S. Han*, A. Shows n, E. Gokce n, D. Muddiman  n, R. Dean n 

MeSH headings : Boronic Acids / pharmacology; Bortezomib; Cluster Analysis; Fungal Proteins / genetics; Fungal Proteins / metabolism; Gene Expression Profiling; Gene Expression Regulation, Fungal; Germination / genetics; Magnaporthe / genetics; Magnaporthe / growth & development; Magnaporthe / pathogenicity; Mutation; Nitrogen / metabolism; Oryza / microbiology; Plant Diseases / microbiology; Polyubiquitin / genetics; Polyubiquitin / metabolism; Proteasome Inhibitors / pharmacology; Proteolysis / drug effects; Proteomics; Pyrazines / pharmacology; Ubiquitination
Sources: Web Of Science, ORCID
Added: August 6, 2018

2012 journal article

Comparative Analysis of the Genomes of Two Field Isolates of the Rice Blast Fungus Magnaporthe oryzae

PLOS GENETICS, 8(8).

By: M. Xue *, J. Yang *, Z. Li *, S. Hu *, N. Yao *, R. Dean n , W. Zhao *, M. Shen * ...

MeSH headings : DNA Transposable Elements; Fungal Proteins; Gene Duplication; Genome, Fungal; Magnaporthe / classification; Magnaporthe / genetics; Magnaporthe / isolation & purification; Magnaporthe / pathogenicity; Molecular Sequence Data; Multigene Family; Oryza / microbiology; Plant Diseases / microbiology; Repetitive Sequences, Nucleic Acid; Sequence Analysis, DNA; Virulence
Sources: Web Of Science, ORCID
Added: August 6, 2018

2012 journal article

In-Depth Analysis of the Magnaporthe oryzae Conidial Proteome

JOURNAL OF PROTEOME RESEARCH, 11(12), 5827–5835.

By: E. Gokce n, W. Franck n, Y. Oh n, R. Dean n  & D. Muddiman n 

author keywords: proteomics; mass spectrometry; Magnaporthe oryzae; FASP; statistical tests; differential protein expression
MeSH headings : Cell Nucleus / chemistry; Chemical Fractionation / methods; Chromatography, Liquid / methods; Cytoplasm / chemistry; Fungal Proteins / analysis; Fungal Proteins / chemistry; Magnaporthe / chemistry; Mass Spectrometry / methods; Nanotechnology; Nuclear Proteins / analysis; Nuclear Proteins / chemistry; Peptides / analysis; Peptides / chemistry; Proteome / analysis; Proteome / chemistry; Reproducibility of Results; Sensitivity and Specificity; Spores, Fungal / chemistry; Time Factors
Sources: Web Of Science, ORCID
Added: August 6, 2018

2012 journal article

Phylogenetic Analysis and Classification of the Fungal bHLH Domain

MOLECULAR BIOLOGY AND EVOLUTION, 29(5), 1301–1318.

By: J. Sailsbery, W. Atchley & R. Dean* 

author keywords: bHLH; fungal; phylogeny; discriminant; analysis
MeSH headings : Amino Acid Sequence; Ascomycota / genetics; Basidiomycota / genetics; Decision Trees; Discriminant Analysis; Fungal Proteins / chemistry; Fungal Proteins / classification; Fungal Proteins / genetics; Genome, Fungal; Helix-Loop-Helix Motifs / genetics; Models, Biological; Molecular Sequence Annotation; Molecular Sequence Data; Phylogeny; Sensitivity and Specificity
Sources: Web Of Science, ORCID
Added: August 6, 2018

2012 review

The Top 10 fungal pathogens in molecular plant pathology

[Review of ]. MOLECULAR PLANT PATHOLOGY, 13(4), 414–430.

By: R. Dean n , J. Van Kan *, Z. Pretorius *, K. Hammond-Kosack *, A. Di Pietro *, P. Spanu *, J. Rudd *, M. Dickman * ...

MeSH headings : Fungi / physiology; Fungi / ultrastructure; Plant Pathology; Plants / genetics; Plants / microbiology
Sources: Web Of Science, ORCID
Added: August 6, 2018

2012 review

Host-induced gene silencing: a tool for understanding fungal host interaction and for developing novel disease control strategies

[Review of ]. MOLECULAR PLANT PATHOLOGY, 13(5), 519–529.

By: C. Nunes n & R. Dean n 

MeSH headings : Fungi / genetics; Gene Silencing / physiology; Host-Pathogen Interactions; Plant Diseases / microbiology; Plants / microbiology
Sources: Web Of Science, ORCID
Added: August 6, 2018