Biochemistry

College of Agriculture and Life Sciences

Works Published in 2000

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Displaying works 1 - 20 of 21 in total

Sorted by most recent date added to the index first, which may not be the same as publication date order.

2000 journal article

Role of the 3 ' tRNA-like structure in tobacco mosaic virus minus-strand RNA synthesis by the viral RNA-dependent RNA polymerase in vitro

JOURNAL OF VIROLOGY, 74(24), 11671–11680.

By: T. Osman*, C. Hemenway n & K. Buck*

MeSH headings : 3' Untranslated Regions / genetics; Base Sequence; DNA-Directed RNA Polymerases / physiology; Molecular Sequence Data; Mutation; Plants, Toxic; RNA, Transfer / genetics; RNA, Viral / physiology; Templates, Genetic; Tobacco / virology; Tobacco Mosaic Virus / physiology; Virus Replication
Source: Web Of Science
Added: August 6, 2018

2000 journal article

Soluble, template-dependent extracts from Nicotiana benthamiana plants infected with potato virus X transcribe both plus- and minus-strand RNA templates

VIROLOGY, 275(2), 444–451.

By: C. Plante n, K. Kim n, N. Pillai-Nair n, T. Osman*, K. Buck* & C. Hemenway n

MeSH headings : Electrophoresis, Agar Gel; Plant Extracts / metabolism; Plants, Toxic; Potexvirus / metabolism; Potexvirus / physiology; RNA, Viral / analysis; RNA, Viral / biosynthesis; RNA-Dependent RNA Polymerase / metabolism; Tobacco / virology; Transcription, Genetic; Virus Replication
Source: Web Of Science
Added: August 6, 2018

2000 journal article

Novel DNA binding domain and genetic regulation model of Bacillus subtilis transition state regulator AbrB

Nature Structural Biology, 7(12), 1139–1146.

By: J. Vaughn, V. Feher, S. Naylor, M. Strauch & J. Cavanagh

Source: NC State University Libraries
Added: August 6, 2018

2000 journal article

UV-induced crosslinks in the 16S rRNAs of Escherichia coli, Bacillus subtilis and Thermus aquaticus and their implications for ribosome structure and photochemistry

NUCLEIC ACIDS RESEARCH, 28(19), 3785–3792.

MeSH headings : Bacillus subtilis / cytology; Bacillus subtilis / genetics; Bacillus subtilis / radiation effects; Base Composition; Base Sequence; Binding Sites; Conserved Sequence / genetics; Conserved Sequence / radiation effects; Escherichia coli / cytology; Escherichia coli / genetics; Escherichia coli / radiation effects; Hot Temperature; Lasers; Molecular Sequence Data; Nucleic Acid Conformation / radiation effects; Nucleotides / chemistry; Nucleotides / genetics; Nucleotides / metabolism; Nucleotides / radiation effects; Photochemistry; RNA, Bacterial / chemistry; RNA, Bacterial / genetics; RNA, Bacterial / metabolism; RNA, Bacterial / radiation effects; RNA, Ribosomal, 16S / chemistry; RNA, Ribosomal, 16S / genetics; RNA, Ribosomal, 16S / metabolism; RNA, Ribosomal, 16S / radiation effects; Ribosomes / chemistry; Ribosomes / genetics; Ribosomes / radiation effects; Thermus / cytology; Thermus / genetics; Thermus / radiation effects; Transcription, Genetic; Ultraviolet Rays
Source: Web Of Science
Added: August 6, 2018

2000 journal article

Levels and correlates of LDL and VLDF, particle sizes among children: the Bogalusa heart study

ATHEROSCLEROSIS, 152(2), 441–449.

By: D. Freedman*, B. Bowman*, J. Otvos n, . Srinivasan* & G. Berenson*

author keywords: nuclear magnetic resonance spectroscopy; lipids; lipoproteins; VLDL; LDL; lipoprotein subfractions; children; blacks
MeSH headings : Adolescent; Black or African American; Child; Coronary Disease / blood; Female; Humans; Insulin / blood; Lipids / blood; Lipoproteins, LDL / blood; Lipoproteins, VLDL / blood; Magnetic Resonance Spectroscopy; Male; Particle Size; Risk Factors; Rural Health; Sex Factors; White People
Source: Web Of Science
Added: August 6, 2018

2000 journal article

Internal loop/bulge and hairpin loop of the iron-responsive element of ferritin mRNA contribute to maximal iron regulatory protein 2 binding and translational regulation in the iso-iron-responsive element/iso-iron regulatory protein family

BIOCHEMISTRY, 39(20), 6235–6242.

MeSH headings : Animals; Copper / chemistry; Ferritins / antagonists & inhibitors; Ferritins / biosynthesis; Ferritins / chemistry; Ferritins / genetics; Hot Temperature; Iron Regulatory Protein 1; Iron Regulatory Protein 2; Iron-Regulatory Proteins; Iron-Sulfur Proteins / chemistry; Iron-Sulfur Proteins / genetics; Iron-Sulfur Proteins / physiology; Lizards; Magnesium / chemistry; Multigene Family; Mutagenesis, Site-Directed; Nuclear Magnetic Resonance, Biomolecular; Nucleic Acid Conformation; Phenanthrolines / chemistry; Protein Binding / genetics; Protein Biosynthesis; Protein Denaturation; Protein Isoforms / chemistry; Protein Isoforms / genetics; RNA, Messenger / chemistry; RNA-Binding Proteins / chemistry; RNA-Binding Proteins / genetics; RNA-Binding Proteins / physiology; Rabbits; Rana catesbeiana; Repressor Proteins / genetics; Repressor Proteins / physiology; Ribonuclease T1 / chemistry
Source: Web Of Science
Added: August 6, 2018

2000 journal article

Association of the C-514T polymorphism in the hepatic lipase gene with variations in lipoprotein subclass profiles - The Framingham Offspring Study

ARTERIOSCLEROSIS THROMBOSIS AND VASCULAR BIOLOGY, 20(3), 815–822.

By: P. Couture*, J. Otvos*, L. Cupples*, C. Lahoz*, P. Wilson*, E. Schaefer*, J. Ordovas*

author keywords: hepatic lipase; HDL; gene polymorphisms; lipoprotein particle size
MeSH headings : Adult; Aged; Apolipoprotein A-I / blood; Cholesterol, HDL / blood; Coronary Disease / enzymology; Coronary Disease / epidemiology; Coronary Disease / genetics; Female; Genetic Predisposition to Disease; Genotype; Humans; Lipase / genetics; Liver / enzymology; Male; Middle Aged; Particle Size; Polymorphism, Single Nucleotide; Risk Factors
Source: Web Of Science
Added: August 6, 2018

2000 journal article

The surface conformation of sindbis virus glycoproteins E1 and E2 at neutral and low pH, as determined by mass spectrometry-based mapping

JOURNAL OF VIROLOGY, 74(12), 5667–5678.

By: B. Phinney n, K. Blackburn* & D. Brown n

MeSH headings : Capsid / chemistry; Capsid / metabolism; Disulfides / metabolism; Hydrogen-Ion Concentration; Iodine Radioisotopes / metabolism; Membrane Glycoproteins / chemistry; Membrane Glycoproteins / metabolism; Pepsin A / metabolism; Peptide Fragments / chemistry; Peptide Fragments / metabolism; Protein Binding; Protein Structure, Tertiary; Serine Endopeptidases / metabolism; Silver Staining; Sindbis Virus; Software; Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization; Surface Properties; Trypsin / metabolism; Tyrosine / metabolism; Viral Envelope Proteins / chemistry; Viral Envelope Proteins / metabolism
Source: Web Of Science
Added: August 6, 2018

2000 journal article

Sindbis virus glycoprotein E1 is divided into two discrete domains at amino acid 129 by disulfide bridge connections

JOURNAL OF VIROLOGY, 74(19), 9313–9316.

MeSH headings : Amino Acid Sequence; Membrane Glycoproteins / chemistry; Molecular Sequence Data; Sindbis Virus / chemistry; Sulfides; Viral Envelope Proteins / chemistry
Source: Web Of Science
Added: August 6, 2018

2000 journal article

Phospholipid/fatty acid-induced secondary structural change in beta-lactoglobulin during heat-induced gelation

JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY, 48(3), 605–610.

author keywords: beta-lactoglobubin; phosphatidylcholine; fatty acid; gelation; secondary structure; viscoelasticity
MeSH headings : Fatty Acids / chemistry; Gels; Hot Temperature; Humans; Lactoglobulins / chemistry; Phosphatidylcholines / chemistry; Protein Structure, Secondary
Source: Web Of Science
Added: August 6, 2018

2000 chapter

Structure determination by directed photo-cross-linking in large RNA molecules with site-specific psoralen

In R.W. Skaggs & J. Schilfgaarde (Eds.), RNA-ligland interactions: Part B (Vol. 318, pp. 104–118).

By: D. Mundus & P. Wollenzien*

Ed(s): . R.W. Skaggs & J. Schilfgaarde

MeSH headings : Azides / pharmacology; Chromatography, High Pressure Liquid; Cross-Linking Reagents / pharmacology; Cystamine / chemistry; DNA / chemistry; DNA / metabolism; Electrophoresis, Polyacrylamide Gel; Ficusin / pharmacology; Furocoumarins; Genetic Techniques; Models, Chemical; Phosphorylation; Photoaffinity Labels / pharmacology; Photosensitizing Agents / pharmacology; RNA / chemistry; RNA / drug effects; RNA / metabolism; RNA / radiation effects; RNA, Ribosomal, 16S / metabolism; Time Factors; Transcription, Genetic; Ultraviolet Rays
Source: NC State University Libraries
Added: August 6, 2018

2000 journal article

Identification and characterization of the iron regulatory element in the ferritin gene of a plant (soybean)

JOURNAL OF BIOLOGICAL CHEMISTRY, 275(23), 17488–17493.

By: J. Wei n & E. Theil n

MeSH headings : Base Sequence; Ferritins / genetics; Genes, Reporter; Glucuronidase / genetics; Iron / metabolism; Iron-Regulatory Proteins; Iron-Sulfur Proteins / metabolism; Luciferases / genetics; Molecular Sequence Data; Mutagenesis, Insertional; Plant Leaves; Promoter Regions, Genetic; RNA, Messenger / genetics; RNA-Binding Proteins / metabolism; Recombinant Proteins / biosynthesis; Sequence Deletion; Soybeans / genetics
Source: Web Of Science
Added: August 6, 2018

2000 journal article

Apolipoprotein epsilon 2 allele is associated with an anti-atherogenic lipoprotein profile in children: The Columbia University BioMarkers Study

PEDIATRICS, 106(3), 568–575.

By: C. Isasi, S. Shea, R. Deckelbaum*, S. Couch*, T. Starc*, J. Otvos n, L. Berglund

author keywords: apolipoprotein epsilon; children; cholesterol
MeSH headings : Adolescent; Adult; Alleles; Apolipoproteins E / genetics; Arteriosclerosis / genetics; Child; Child, Preschool; Cholesterol, HDL / blood; Cholesterol, LDL / blood; Female; Genotype; Hispanic or Latino / genetics; Humans; Linear Models; Male; Phenotype; White People / genetics
Source: Web Of Science
Added: August 6, 2018

2000 journal article

Box C/D snoRNA-associated proteins: Two pairs of evolutionarily ancient proteins and possible links to replication and transcription

RNA, 6(6), 861–879.

By: D. Newman n, J. Kuhn*, G. Shanab & E. Maxwell*

author keywords: intronic snoRNA; snoRNA processing; snoRNP proteins
MeSH headings : Amino Acid Motifs; Amino Acid Sequence; Animals; Conserved Sequence; DNA Replication; Evolution, Molecular; Mice; Molecular Sequence Data; Nuclear Proteins; RNA, Small Nucleolar / genetics; RNA, Small Nucleolar / physiology; Ribonucleoproteins, Small Nucleolar / genetics; Ribonucleoproteins, Small Nucleolar / physiology; Saccharomyces cerevisiae Proteins; Sequence Alignment; Substrate Specificity; Transcription, Genetic
Source: Web Of Science
Added: August 6, 2018

2000 journal article

A single deletion in the membrane-proximal region of the Sindbis virus glycoprotein E2 endodomain blocks virus assembly

JOURNAL OF VIROLOGY, 74(9), 4220–4228.

MeSH headings : Amino Acid Sequence; Animals; Binding Sites; Biological Transport; Cell Line; Cell Membrane / metabolism; Cricetinae; Cytoplasm / metabolism; Humans; Intracellular Fluid / metabolism; Molecular Sequence Data; Mutagenesis; Nucleocapsid / metabolism; Sindbis Virus / genetics; Sindbis Virus / physiology; Sindbis Virus / ultrastructure; Viral Envelope Proteins / genetics; Viral Envelope Proteins / metabolism; Viral Envelope Proteins / physiology; Viral Structural Proteins / metabolism; Virus Assembly / physiology
Source: Web Of Science
Added: August 6, 2018

2000 journal article

Absence of association between genetic variation in the promoter of the microsomal triglyceride transfer protein gene and plasma lipoproteins in the Framingham Offspring Study

ATHEROSCLEROSIS, 148(2), 337–343.

author keywords: microsomal triglyceride transfer protein; LDL-cholesterol; lipoprotein subfractions
MeSH headings : Adult; Apolipoproteins / blood; Cardiovascular Diseases / genetics; Carrier Proteins / genetics; Cholesterol Ester Transfer Proteins; Female; Genetic Predisposition to Disease; Genetic Variation; Genotype; Glycoproteins; Humans; Lipids / blood; Lipoproteins / blood; Lipoproteins / classification; Male; Middle Aged; Polymorphism, Genetic / physiology; Promoter Regions, Genetic / genetics; Prospective Studies
Source: Web Of Science
Added: August 6, 2018

2000 journal article

Initiation factor 3-induced structural changes in the 30 S ribosomal subunit and in complexes containing tRNA(f)(Met) and mRNA

JOURNAL OF MOLECULAR BIOLOGY, 299(3), 615–628.

author keywords: initiation factor 3; UV-induced crosslinking; 16 S rRNA coformational change; molecular model; 16 S rRNA-tRNA interaction
MeSH headings : Alkalies / metabolism; Anticodon / genetics; Bacterial Proteins / chemistry; Bacterial Proteins / metabolism; Base Sequence; Binding Sites / radiation effects; Escherichia coli / chemistry; Escherichia coli / genetics; Hydrolysis; Models, Molecular; Nucleic Acid Conformation; Peptide Initiation Factors / chemistry; Peptide Initiation Factors / metabolism; Prokaryotic Initiation Factor-3; Protein Binding / radiation effects; Protein Structure, Tertiary; RNA, Bacterial / chemistry; RNA, Bacterial / genetics; RNA, Bacterial / metabolism; RNA, Messenger / genetics; RNA, Messenger / metabolism; RNA, Ribosomal, 16S / chemistry; RNA, Ribosomal, 16S / genetics; RNA, Ribosomal, 16S / metabolism; RNA, Transfer, Met / genetics; RNA, Transfer, Met / metabolism; RNA-Binding Proteins / chemistry; RNA-Binding Proteins / metabolism; Ribosomal Proteins / chemistry; Ribosomal Proteins / metabolism; Ribosomes / chemistry; Ribosomes / genetics; Ribosomes / metabolism; Transcription, Genetic / genetics; Ultraviolet Rays
Source: Web Of Science
Added: August 6, 2018

2000 journal article

Association of cholesteryl ester transfer protein-TaqIB polymorphism with variations in lipoprotein subclasses and coronary heart disease risk - The Framingham study

ARTERIOSCLEROSIS THROMBOSIS AND VASCULAR BIOLOGY, 20(5), 1323–1329.

By: J. Ordovas n, L. Cupples n, D. Corella n, J. Otvos n, D. Osgood n, A. Martinez n, C. Lahoz n, O. Coltell n, P. Wilson n, E. Schaefer n

author keywords: cholesteryl ester transfer protein; coronary heart disease; lipoproteins; gene polymorphisms
MeSH headings : Adult; Alcohol Drinking; Apolipoproteins B / blood; Blood Glucose / metabolism; Body Mass Index; Carrier Proteins / blood; Carrier Proteins / genetics; Cholesterol Ester Transfer Proteins; Cholesterol, LDL / blood; Coronary Disease / genetics; Deoxyribonucleases, Type II Site-Specific; Female; Genotype; Glycoproteins; Humans; Lipoproteins / blood; Male; Middle Aged; Polymorphism, Restriction Fragment Length; Risk Factors; Triglycerides / blood
Source: Web Of Science
Added: August 6, 2018

2000 journal article

The ferritin iron entry and exit problem

INORGANICA CHIMICA ACTA, 297(1-2), 242–251.

By: E. Theil*, H. Takagi n, G. Small n, L. He n, A. Tipton & D. Danger n

author keywords: ferritin; iron biominerals; ferroxidation; iron/dioxygen catalysis
Source: Web Of Science
Added: August 6, 2018

2000 journal article

Organization of the 16S rRNA around its 5 ' terminus determined by photochemical crosslinking in the 30S ribosomal subunit

RNA, 6(1), 26–40.

author keywords: 16S rRNA three-dimensional structure; intramolecular RNA-RNA cross-links; reverse transcription arrest assay
MeSH headings : Azides; Base Sequence; Cross-Linking Reagents; Molecular Sequence Data; Nucleic Acid Conformation; RNA, Ribosomal, 16S / chemistry; RNA, Transfer / chemistry; RNA, Transfer / radiation effects; Ultraviolet Rays
Source: Web Of Science
Added: August 6, 2018