Bioinformatics Research Center - 2007

Zeng, Z. B. (2007). The Hill–Robertson effect is a consequence of interplay between linkage, selection and drift: a commentary on ‘The effect of linkage on limits to artificial selection’ by W. G. Hill and A. Robertson. Genetics Research, 89(5-6), 309–310. https://doi.org/10.1017/s0016672308009506

Melchinger, A. E., Utz, H. F., Piepho, H.-P., Zeng, Z.-B., & Schoen, C. C. (2007). The role of epistasis in the manifestation of heterosis: A systems-oriented approach. GENETICS, 177(3), 1815–1825. https://doi.org/10.1534/genetics.107.077537

Yang, R., Gao, H., Wang, X., Zhang, J., Zeng, Z.-B., & Wu, R. (2007). A semiparametric approach for composite functional mapping of dynamic quantitative traits. GENETICS, 177(3), 1859–1870. https://doi.org/10.1534/genetics.107.077321

Lai, C.-Q., Leips, J., Zou, W., Roberts, J. F., Wollenberg, K. R., Parnell, L. D., … Mackay, T. F. C. (2007). Speed-mapping quantitative trait loci using microarrays. NATURE METHODS, 4(10), 839–841. https://doi.org/10.1038/NMETH1084

Thorne, J. L. (2007). Protein evolution constraints and model-based techniques to study them. CURRENT OPINION IN STRUCTURAL BIOLOGY, 17(3), 337–341. https://doi.org/10.1016/j.sbi.2007.05.006

Li, L., Andersen, M. E., Heber, S., & Zhang, Q. (2007). Non-monotonic dose-response relationship in steroid hormone receptor-mediated gene expression. JOURNAL OF MOLECULAR ENDOCRINOLOGY, 38(5-6), 569–585. https://doi.org/10.1677/JME-07-0003

Schaff, J. E., Nielsen, D. M., Smith, C. P., Scholl, E. H., & Bird, D. M. (2007). Comprehensive transcriptome profiling in tomato reveals a role for glycosyltransferase in Mi-mediated nematode resistance. PLANT PHYSIOLOGY, 144(2), 1079–1092. https://doi.org/10.1104/pp.106.090241

Choi, S. C., Hobolth, A., Robinson, D. M., Kishino, H., & Thorne, J. L. (2007). Quantifying the impact of protein tertiary structure on molecular evolution. MOLECULAR BIOLOGY AND EVOLUTION, 24(8), 1769–1782. https://doi.org/10.1093/molbev/msm097

Thorne, J. L., Choi, S. C., Yu, J., Higgs, P. G., & Kishino, H. (2007). Population genetics without intraspecific data. MOLECULAR BIOLOGY AND EVOLUTION, 24(8), 1667–1677. https://doi.org/10.1093/molbev/msm085

Lin, Y.-M., Fang, S.-C., & Thorne, J. L. (2007). A tabu search algorithm for maximum parsimony phylogeny inference. EUROPEAN JOURNAL OF OPERATIONAL RESEARCH, 176(3), 1908–1917. https://doi.org/10.1016/j.ejor.2005.10.031

Hobolth, A., Christensen, O. F., Mailund, T., & Schierup, M. H. (2007). Genomic relationships and speciation times of human, chimpanzee, and gorilla inferred from a coalescent hidden Markov model. PLOS GENETICS, 3(2), 294–304. https://doi.org/10.1371/journal.pgen.0030007

Zou, W., Aylor, D. L., & Zeng, Z. B. (2007). eQTL Viewer: visualizing how sequence variation affects genome-wide transcription. BMC Bioinformatics, 8(7).