Bioinformatics Research Center - 2011

Chakraborty, S., & Zeng, Z. B. (2011). QTL Mapping for Days to Flowering under Drought Condition in Rice (Oryza sativa L.) Genome. Notulae Botanicae Horti Agrobotanici Cluj-Napoca, 39(1), 58. https://doi.org/10.15835/nbha3915610

Kaddurah-Daouk, R., Baillie, R. A., Zhu, H., Zeng, Z.-B., Wiest, M. M., Nguyen, U. T., … Krauss, R. M. (2011). Enteric Microbiome Metabolites Correlate with Response to Simvastatin Treatment. PLOS ONE, 6(10). https://doi.org/10.1371/journal.pone.0025482

Ksepka, D. T., Benton, M. J., Carrano, M. T., Gandolfo, M. A., Head, J. J., Hermsen, E. J., … Parham, J. F. (2011). Synthesizing and databasing fossil calibrations: divergence dating and beyond. Biology Letters, 7(6), 801–803.

Yokoyama, K. D., Thorne, J. L., & Wray, G. A. (2011). Coordinated Genome-Wide Modifications within Proximal Promoter Cis-regulatory Elements during Vertebrate Evolution. GENOME BIOLOGY AND EVOLUTION, 3, 66–74. https://doi.org/10.1093/gbe/evq078

Cartwright, R. A., Lartillot, N., & Thorne, J. L. (2011). History Can Matter: Non-Markovian Behavior of Ancestral Lineages. SYSTEMATIC BIOLOGY, 60(3), 276–290. https://doi.org/10.1093/sysbio/syr012

Dong, S. Y., Wang, Y., Cassidy-Amstutz, C., Lu, G., Bigler, R., Jezyk, M. R., … Wang, Z. F. (2011). Specific and modular binding code for cytosine recognition in pumilio/FBF (PUF) RNA-binding domains. Journal of Biological Chemistry, 286(30), 26732–26742.

Winham, S. J., & Motsinger-Reif, A. A. (2011). The Effect of Retrospective Sampling on Estimates of Prediction Error for Multifactor Dimensionality Reduction. Annals of Human Genetics, 75, 46–61.

Duarte, C. W., & Zeng, Z.-B. (2011). High-Confidence Discovery of Genetic Network Regulators in Expression Quantitative Trait Loci Data. GENETICS, 187(3), 955–964. https://doi.org/10.1534/genetics.110.124685

Winham, S., Wang, C., & Motsinger-Reif, A. A. (2011). A Comparison of Multifactor Dimensionality Reduction and L-1-Penalized Regression to Identify Gene-Gene Interactions in Genetic Association Studies. STATISTICAL APPLICATIONS IN GENETICS AND MOLECULAR BIOLOGY, 10(1). https://doi.org/10.2202/1544-6115.1613

Ji, Y., Hebbring, S., Zhu, H., Jenkins, G. D., Biernacka, J., Snyder, K., … Weinshilboum, R. M. (2011). Glycine and a Glycine Dehydrogenase (GLDC) SNP as Citalopram/Escitalopram Response Biomarkers in Depression: Pharmacometabolomics-Informed Pharmacogenomics. CLINICAL PHARMACOLOGY & THERAPEUTICS, 89(1), 97–104. https://doi.org/10.1038/clpt.2010.250