Bioinformatics Research Center

Works Published in 2004

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Sorted by most recent date added to the index first, which may not be the same as publication date order.

2004 article

A Bayesian approach to DNA sequence segmentation - Discussion

Thorne, J. L. (2004, September). BIOMETRICS, Vol. 60, pp. 584–585.

By: J. Thorne n

UN Sustainable Development Goal Categories
Source: Web Of Science
Added: August 6, 2018

2004 review

Molecular evidence on plant divergence times

[Review of ]. AMERICAN JOURNAL OF BOTANY, 91(10), 1656–1665.

author keywords: adaptive radiation; biogeography; divergence time; molecular clock; phylogeny; rates
UN Sustainable Development Goal Categories
15. Life on Land (Web of Science; OpenAlex)
Source: Web Of Science
Added: August 6, 2018

2004 journal article

Estimating absolute rates of synonymous and nonsynonymous nucleotide substitution in order to characterize natural selection and date species divergences

MOLECULAR BIOLOGY AND EVOLUTION, 21(7), 1201–1213.

By: T. Seo n, H. Kishino & J. Thorne*

author keywords: Bayesian method; Markov chain Monte Carlo (MCMC); rate change model; lognormal; evolutionary rate; selection; synonymous rate; nonsynonymous rate
MeSH headings : Animals; Base Sequence / genetics; Bayes Theorem; Electron Transport Complex IV / genetics; Evolution, Molecular; Genetic Variation; Nucleotides / genetics; Polymorphism, Genetic; Primates / genetics; Rodentia / genetics; Selection, Genetic; Sequence Analysis, DNA / methods
TL;DR: This work analyzes cytochrome oxidase subunit I evolution in primates and infer that nonsynonymous rates have a greater tendency to change over time than do synonymous rates, and suggests that rates have been positively correlated. (via Semantic Scholar)
Sources: Web Of Science, NC State University Libraries
Added: August 6, 2018

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