Bioinformatics Research Center

Works Published in 2004

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2004 article

A Bayesian approach to DNA sequence segmentation - Discussion

Thorne, J. L. (2004, September). BIOMETRICS, Vol. 60, pp. 584–585.

By: J. Thorne n

UN Sustainable Development Goal Categories
Source: Web Of Science
Added: August 6, 2018

2004 review

Molecular evidence on plant divergence times

[Review of ]. AMERICAN JOURNAL OF BOTANY, 91(10), 1656–1665.

author keywords: adaptive radiation; biogeography; divergence time; molecular clock; phylogeny; rates
UN Sustainable Development Goal Categories
15. Life on Land (Web of Science; OpenAlex)
Source: Web Of Science
Added: August 6, 2018

2004 journal article

Estimating absolute rates of synonymous and nonsynonymous nucleotide substitution in order to characterize natural selection and date species divergences


By: T. Seo n, H. Kishino & J. Thorne*

author keywords: Bayesian method; Markov chain Monte Carlo (MCMC); rate change model; lognormal; evolutionary rate; selection; synonymous rate; nonsynonymous rate
MeSH headings : Animals; Base Sequence / genetics; Bayes Theorem; Electron Transport Complex IV / genetics; Evolution, Molecular; Genetic Variation; Nucleotides / genetics; Polymorphism, Genetic; Primates / genetics; Rodentia / genetics; Selection, Genetic; Sequence Analysis, DNA / methods
TL;DR: This work analyzes cytochrome oxidase subunit I evolution in primates and infer that nonsynonymous rates have a greater tendency to change over time than do synonymous rates, and suggests that rates have been positively correlated. (via Semantic Scholar)
Sources: Web Of Science, NC State University Libraries
Added: August 6, 2018

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