Bioinformatics Research Center

Works Published in 2021

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Displaying all 7 works

Sorted by most recent date added to the index first, which may not be the same as publication date order.

2021 article

Measuring Phylogenetic Information of Incomplete Sequence Data

Seo, T.-K., Gascuel, O., & Thorne, J. L. (2021, September 1). SYSTEMATIC BIOLOGY.

co-author countries: France 🇫🇷 Korea (Republic of) 🇰🇷 United States of America 🇺🇸
MeSH headings : Evolution, Molecular; INDEL Mutation; Models, Genetic; Models, Statistical; Phylogeny; Sequence Alignment
Source: Web Of Science
Added: March 14, 2022

2021 journal article

Quantitative Trait Locus Mapping for Common Scab Resistance in a Tetraploid Potato Full-Sib Population

PLANT DISEASE, 105(10), 3048–3054.

By: G. Pereira*, M. Mollinari n, X. Qu*, C. Thill*, Z. Zeng n, K. Haynes*, G. Yencho n

co-author countries: Kenya 🇰🇪 United States of America 🇺🇸
author keywords: disease resistance; polyploid QTL model; single-nucleotide polymorphism; Solanum tuberosum; Streptomyces spp
MeSH headings : Chromosome Mapping; Plant Tubers / genetics; Quantitative Trait Loci / genetics; Solanum tuberosum / genetics; Tetraploidy
Source: Web Of Science
Added: January 18, 2022

2021 journal article

Genome and transcriptome sequencing of the green bottle fly, Lucilia sericata, reveals underlying factors of sheep flystrike and maggot debridement therapy

GENOMICS, 113(6), 3978–3988.

co-author countries: United States of America 🇺🇸
author keywords: Lucilia sericata; Maggot debridement therapy; Whole genome; Salivary gland; Malpighian tubule; Heat shock
MeSH headings : Animals; Calliphoridae; Debridement; Diptera / genetics; Humans; Larva / genetics; Larva / metabolism; Sheep / genetics; Transcriptome
Source: Web Of Science
Added: October 26, 2021

2021 article

Pedigree-based and phylogenetic methods support surprising patterns of mutation rate and spectrum in the gray mouse lemur

Campbell, C. R., Tiley, G. P., Poelstra, J. W., Hunnicutt, K. E., Larsen, P. A., Lee, H.-J., … Yoder, A. D. (2021, July 16). HEREDITY.

By: C. Campbell*, G. Tiley*, J. Poelstra*, K. Hunnicutt*, P. Larsen*, H. Lee*, J. Thorne n, M. Reis*, A. Yoder*

co-author countries: United Kingdom of Great Britain and Northern Ireland 🇬🇧 United States of America 🇺🇸
MeSH headings : Animals; Cheirogaleidae / genetics; Genome; Mice; Mutation Rate; Pedigree; Phylogeny
Source: Web Of Science
Added: August 2, 2021

2021 article

High-resolution characterization of the structural features and genetic variation of six feline leukocyte antigen class I loci via single molecule, real-time (SMRT) sequencing

Holmes, J. C., Scholl, E. H., Dickey, A. N., & Hess, P. R. (2021, June 27). IMMUNOGENETICS.

By: J. Holmes n, E. Scholl n, A. Dickey n & P. Hess n

co-author countries: United States of America 🇺🇸
author keywords: Cats; Class I genes; High-throughput DNA sequencing; Major histocompatibility complex; Polymorphism
MeSH headings : Animals; Cats; Exons; Genes, MHC Class I / genetics; Genetic Variation; Haplotypes; High-Throughput Nucleotide Sequencing; Histocompatibility Antigens Class I / chemistry; Histocompatibility Antigens Class I / genetics; Sequence Analysis, DNA / methods
Source: Web Of Science
Added: July 6, 2021

2021 journal article

Discovery of a major QTL for root-knot nematode (Meloidogyne incognita) resistance in cultivated sweetpotato (Ipomoea batatas)

THEORETICAL AND APPLIED GENETICS, 134(7), 1945–1955.

co-author countries: Kenya 🇰🇪 Uganda 🇺🇬 United States of America 🇺🇸
MeSH headings : Animals; Chromosome Mapping; Disease Resistance / genetics; Genetic Linkage; Genotype; Ipomoea batatas / genetics; Ipomoea batatas / parasitology; Plant Diseases / genetics; Plant Diseases / parasitology; Polymorphism, Single Nucleotide; Quantitative Trait Loci; Tylenchoidea / pathogenicity
Source: Web Of Science
Added: April 26, 2021

2021 journal article

The recombination landscape and multiple QTL mapping in a Solanum tuberosum cv. 'Atlantic'-derived F-1 population

HEREDITY, 126(5), 817–830.

By: G. Pereira n, M. Mollinari n, M. Schumann n, M. Clough n, Z. Zeng n & G. Yencho n

co-author countries: United States of America 🇺🇸
MeSH headings : Phenotype; Plant Breeding; Plant Tubers; Quantitative Trait Loci; Recombination, Genetic; Solanum tuberosum / genetics
Source: Web Of Science
Added: March 29, 2021

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