Bioinformatics - 2005

Bush, W. S., Motsinger, A. A., Dudek, S. M., & Ritchie, M. D. (2005). Can Neural Network Constraints in GP Provide Power to Detect Genes Associated with Human Disease? In F. Rothlauf (Ed.), Applications of Evolutionary Computing. EvoWorkshops 2005 (pp. 44–53). https://doi.org/10.1007/978-3-540-32003-6_5

Weir, B. S., Cardon, L. R., Anderson, A. D., Nelson, D. M., & Hill, W. G. (2005). Measures of human population structure show heterogeneity among genomic regions. Genome Research, 15(11), 1468–1476. https://doi.org/10.1101/gr.4398405

Weir, B. S., Cardon, L. R., Anderson, A. D., Nielsen, D. M., & Hill, W. G. (2005). Measures of human population structure show heterogeneity among genomic regions. Genome Res, 15(11), 1468–1476.

Stafford-Smith, M., Podgoreanu, M., Swaminathan, M., Phillips-Bute, B., Mathew, J. P., Hauser, E. H., … Schwinn, D. A. (2005). Association of genetic polymorphisms with risk of renal injury after coronary bypass graft surgery. American Journal of Kidney Diseases, 45(3), 519–530. https://doi.org/10.1053/j.ajkd.2004.11.021

Grocott, H. P., White, W. D., Morris, R. W., Podgoreanu, M. V., Mathew, J. P., Nielsen, D. M., … Newman, M. F. (2005). Genetic Polymorphisms and the Risk of Stroke After Cardiac Surgery. Stroke, 36(9), 1854–1858. https://doi.org/10.1161/01.str.0000177482.23478.dc

Varnek, A., Fourches, D., Hoonakker, F., & Solov’ev, V. P. (2005). Substructural fragments: an universal language to encode reactions, molecular and supramolecular structures. Journal of Computer-Aided Molecular Design, 19(9-10), 693–703. https://doi.org/10.1007/s10822-005-9008-0

Drumm, M. L., Konstan, M. W., Schluchter, M. D., Handler, A., Pace, R., Zou, F., … Knowles, M. R. (2005). Genetic Modifiers of Lung Disease in Cystic Fibrosis. New England Journal of Medicine, 353(14), 1443–1453. https://doi.org/10.1056/NEJMoa051469

Graham, M. R., Virtaneva, K., Porcella, S. F., Barry, W. T., Gowen, B. B., Johnson, C. R., … Musser, J. M. (2005). Group A Streptococcus Transcriptome Dynamics during Growth in Human Blood Reveals Bacterial Adaptive and Survival Strategies. The American Journal of Pathology, 166(2), 455–465. https://doi.org/10.1016/S0002-9440(10)62268-7

McCarter, J. P., Bird, D. M. K., & Mitreva, M. (2005). Nematode gene sequences: Update for December 2005. Journal of Nematology, 37(4), 417–421. Retrieved from http://www.scopus.com/inward/record.url?eid=2-s2.0-33744980477&partnerID=MN8TOARS

Bird, D. M. K., Blaxter, M. L., McCarter, J. P., Mitreva, M., Sternberg, P. W., & Thomas, W. K. (2005). A white paper on nematode comparative genomics. Journal of Nematology, 37(4), 408–416. Retrieved from http://www.scopus.com/inward/record.url?eid=2-s2.0-33744994353&partnerID=MN8TOARS

Knabe, C., Stiller, M., Berger, G., Reif, D., Gildenhaar, R., Howlett, C. R., & Zreiqat, H. (2005). The effect of bioactive glass ceramics on the expression of bone-related genes and proteins in vitro. Clinical Oral Implants Research, 16(1), 119–127. https://doi.org/10.1111/j.1600-0501.2004.01066.x

Reif, D. M., Dudek, S. M., Shaffer, C. M., Wang, J., & Moore, J. H. (2005). Exploratory visual analysis of pharmacogenomic results. Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing. Retrieved from http://europepmc.org/abstract/med/15759635

Reif, D. M., Dudek, S. M., Shaffer, C. M., Wang, J., & Moore, J. H. (2005). Exploratory visual analysis of pharmacogenomic results. Proceedings of the Pacific Symposium on Biocomputing 2005, PSB 2005, 296–307. Retrieved from http://www.scopus.com/inward/record.url?eid=2-s2.0-15944408038&partnerID=MN8TOARS

White, B. C., Gilbert, J. C., Reif, D. M., & Moore, J. H. (2005). A statistical comparison of grammatical evolution strategies in the domain of human genetics. 2005 IEEE Congress on Evolutionary Computation, IEEE CEC 2005. Proceedings, 1, 676–682. Retrieved from http://www.scopus.com/inward/record.url?eid=2-s2.0-27144535907&partnerID=MN8TOARS

Wilke, R. A., Reif, D. M., & Moore, J. H. (2005). Combinatorial Pharmacogenetics. Nat Rev Drug Discov, 4(11), 911–918. https://doi.org/10.1038/nrd1874

Scholl, E. H., & Bird, D. M. (2005). Resolving tylenchid evolutionary relationships through multiple gene analysis derived from EST data. MOLECULAR PHYLOGENETICS AND EVOLUTION, 36(3), 536–545. https://doi.org/10.1016/j.ympev.2005.03.016

Bird, D. M. (2005). Model systems in agriculture: Lessons from worms. Annals of Applied Biology, 146(2), 147–154. https://doi.org/10.1111/j.1744-7348.2005.040066.x

Weerasinghe, R. R., Bird, D. M., & Allen, N. S. (2005). Root-knot nematodes and bacterial Nod factors elicit common signal transduction events in Lotus japonicus. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 102(8), 3147–3152. https://doi.org/10.1073/pnas.0407926102

Charles, L., Carbone, I., Davies, K. G., Bird, D., Burke, M., Kerry, B. R., & Opperman, C. H. (2005). Phylogenetic analysis of Pasteuria penetrans by use of multiple genetic loci. JOURNAL OF BACTERIOLOGY, 187(16), 5700–5708. https://doi.org/10.1128/JB.187.16.5700-5708.2005

Mitreva, M., Blaxter, M. L., Bird, D. M., & McCarter, J. P. (2005). [Review of Comparative genomics of nematodes]. TRENDS IN GENETICS, 21(10), 573–581. https://doi.org/10.1016/j.tig.2005.08.003