Works Published in 2015

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Displaying works 21 - 40 of 53 in total

Sorted by most recent date added to the index first, which may not be the same as publication date order.

2015 book

Computational Methods Used in Systems Biology

In Systems Biology in Toxicology and Environmental Health (pp. 85–115).

By: M. Meisner & D. Reif*

Contributors: M. Meisner & D. Reif*

Source: ORCID
Added: May 14, 2019

2015 journal article

Comparison of toxicity values across zebrafish early life stages and mammalian studies: Implications for chemical testing

Reproductive Toxicology, 55, 3–10.

By: N. Ducharme*, D. Reif n, J. Gustafsson* & M. Bondesson*

co-author countries: Sweden 🇸🇪

Contributors: N. Ducharme*, D. Reif n, J. Gustafsson* & M. Bondesson*

author keywords: Meta-analysis; Toxicity; Teratogen; Zebrafish; Human exposure
MeSH headings : Animal Testing Alternatives; Animals; Embryo, Nonmammalian / drug effects; Larva / drug effects; Lethal Dose 50; Mice; Rabbits; Rats; Toxicity Tests / methods; Zebrafish / embryology
Source: ORCID
Added: May 14, 2019

2015 journal article

Carcinogenicity of lindane, DDT, and 2,4-dichlorophenoxyacetic acid.

The Lancet. Oncology, 8.

By: D. Loomis*, K. Guyton*, Y. Grosse*, G. El*, V. Bouvard*, L. Benbrahim-Tallaa*, N. Guha*, H. Mattock*, K. Straif*, France

co-author countries: France 🇫🇷
Source: ORCID
Added: May 14, 2019

2015 journal article

Maize Homologs of Hydroxycinnamoyltransferase, a Key Enzyme in Lignin Biosynthesis, Bind the Nucleotide Binding Leucine-Rich Repeat Rp1 Proteins to Modulate the Defense Response

Plant Physiol, 169(3), 2230–2243.

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2015 journal article

Consistent testing for recurrent genomic aberrations

BIOMETRIKA, 102(4), 783–796.

By: V. Walter*, F. Wright n & A. Nobel*

author keywords: Consistency; DNA copy number; DNA methylation; Genome-wide association study; Hypothesis testing
Source: Web Of Science
Added: August 6, 2018

2015 journal article

The Founder Strains of the Collaborative Cross Express a Complex Combination of Advantageous and Deleterious Traits for Male Reproduction

G3-GENES GENOMES GENETICS, 5(12), 2671–2683.

By: F. Odet*, W. Pan*, T. Bell*, S. Goodson*, A. Stevans*, Z. Yun*, D. Aylor n, C. Kao* ...

author keywords: sperm; motility; vacuole; Collaborative Cross
MeSH headings : Animals; Crosses, Genetic; Female; Founder Effect; Infertility, Male / genetics; Lactic Acid / biosynthesis; Male; Mice; Mice, Inbred Strains; Phenotype; Quantitative Trait Loci; Quantitative Trait, Heritable; Reproduction / genetics; Sperm Count; Sperm Motility; Spermatozoa / cytology; Spermatozoa / physiology; Testis / anatomy & histology; Testis / cytology; Testis / physiology
Source: Web Of Science
Added: August 6, 2018

2015 journal article

Impact of Low-Dose Oral Exposure to Bisphenol A (BPA) on Juvenile and Adult Rat Exploratory and Anxiety Behavior: A CLARITY-BPA Consortium Study

TOXICOLOGICAL SCIENCES, 148(2), 341–354.

By: M. Rebuli n, L. Camacho*, M. Adonay n, D. Reif n, D. Aylor n & H. Patisaul n

Contributors: M. Rebuli n, L. Camacho*, M. Adonay n, D. Reif n, D. Aylor n & H. Patisaul n

author keywords: bisphenol A; CLARITY; behavior; anxiety; exploratory activity; endocrine disruption; EDC; sexually dimorphic; brain; BPA; plastic
MeSH headings : Age Factors; Animals; Anxiety / chemically induced; Anxiety / psychology; Behavior, Animal / drug effects; Benzhydryl Compounds / toxicity; Dose-Response Relationship, Drug; Endocrine Disruptors / toxicity; Exploratory Behavior / drug effects; Female; Gestational Age; Lactation; Male; Maternal Exposure / adverse effects; Motor Activity / drug effects; Neurotoxicity Syndromes / etiology; Neurotoxicity Syndromes / psychology; Phenols / toxicity; Pregnancy; Prenatal Exposure Delayed Effects; Rats, Sprague-Dawley; Risk Assessment; Sex Factors
Sources: Web Of Science, ORCID
Added: August 6, 2018

2015 journal article

Genome-wide association meta-analysis identifies five modifier loci of lung disease severity in cystic fibrosis

Nature Communications, 6.

By: H. Corvol, S. Blackman, P. Boelle, P. Gallins, R. Pace, J. Stonebraker, F. Accurso, A. Clement ...

Source: NC State University Libraries
Added: August 6, 2018

2015 journal article

Contact isolation is a risk factor for venous thromboembolism in trauma patients

JOURNAL OF TRAUMA AND ACUTE CARE SURGERY, 79(5), 833–837.

By: C. Reed*, R. Ferguson*, Y. Peng*, B. Collier*, E. Bradburn*, A. Toms*, S. Fogel*, C. Baker*, M. Hamill*

co-author countries: Puerto Rico 🇵🇷
author keywords: Contact isolation; venous thromboembolism (VTE); deep venous thrombosis (DVT); complications
MeSH headings : Adult; Age Distribution; Anticoagulants / therapeutic use; Contact Tracing / methods; Databases, Factual; Female; Follow-Up Studies; Humans; Incidence; Injury Severity Score; Length of Stay; Logistic Models; Male; Middle Aged; Prospective Studies; Risk Factors; Sex Distribution; Statistics, Nonparametric; Trauma Centers; Venous Thromboembolism / diagnosis; Venous Thromboembolism / drug therapy; Venous Thromboembolism / epidemiology; Venous Thromboembolism / etiology; Wounds and Injuries / complications; Wounds and Injuries / diagnosis; Wounds and Injuries / surgery; Young Adult
Source: Web Of Science
Added: August 6, 2018

2015 journal article

Increased exposure to acute thermal stress is associated with a non-linear increase in recombination frequency and an independent linear decrease in fitness in Drosophila

BMC EVOLUTIONARY BIOLOGY, 15.

By: S. Jackson n, D. Nielsen n & N. Singh n

MeSH headings : Animals; Biological Evolution; Drosophila melanogaster / cytology; Drosophila melanogaster / genetics; Drosophila melanogaster / physiology; Heat-Shock Response; Meiosis; Recombination, Genetic
Sources: Web Of Science, ORCID
Added: August 6, 2018

2015 journal article

In vitro screening for population variability in toxicity of pesticide-containing mixtures

ENVIRONMENT INTERNATIONAL, 85, 147–155.

co-author countries: Jordan 🇯🇴
author keywords: Pesticide; Mixture; Population
MeSH headings : Black People / genetics; Cell Culture Techniques; Cell Line; Cell Survival / drug effects; Cell Survival / genetics; Complex Mixtures / analysis; Complex Mixtures / toxicity; Dose-Response Relationship, Drug; Genome-Wide Association Study; Genotype; Hazardous Substances / analysis; Hazardous Substances / toxicity; Humans; Hydrocarbons, Chlorinated / analysis; Hydrocarbons, Chlorinated / toxicity; Multivariate Analysis; Pesticides / analysis; Pesticides / toxicity; Polymorphism, Genetic; Reproducibility of Results; White People / genetics
Source: Web Of Science
Added: August 6, 2018

2015 journal article

Genome-wide assessment of recurrent genomic imbalances in canine leukemia identifies evolutionarily conserved regions for subtype differentiation

CHROMOSOME RESEARCH, 23(4), 681–708.

co-author countries: Canada 🇨🇦
author keywords: Leukemia; Canine; Chromosome; Comparative genomic hybridization; Comparative genomics
MeSH headings : Algorithms; Animals; Cell Transformation, Neoplastic / genetics; Chromosome Aberrations; Chromosome Mapping; Cluster Analysis; Comparative Genomic Hybridization; Conserved Sequence; DNA Copy Number Variations; Disease Models, Animal; Dogs; Evolution, Molecular; Female; Gene Dosage; Genome-Wide Association Study; Genomic Library; Genomics; Humans; In Situ Hybridization, Fluorescence; Leukemia / diagnosis; Leukemia / genetics; Leukemia / metabolism; Male
Source: Web Of Science
Added: August 6, 2018

2015 journal article

Relative Quantification and Higher-Order Modeling of the Plasma Glycan Cancer Burden Ratio in Ovarian Cancer Case-Control Samples

JOURNAL OF PROTEOME RESEARCH, 14(10), 4394–4401.

author keywords: N-linked glycosylation; INLIGHT; ovarian cancer; relative quantification; cancer biomarker; human plasma
MeSH headings : Biomarkers, Tumor / blood; Carbohydrate Sequence; Case-Control Studies; Chromatography, Liquid / methods; Female; Fucose / blood; Glycosylation; Humans; Hydrazines / chemistry; Molecular Sequence Data; Neoplasm Staging; Ovarian Neoplasms / blood; Ovarian Neoplasms / diagnosis; Ovarian Neoplasms / pathology; Polysaccharides / blood; Sialic Acids / blood; Staining and Labeling / methods; Tandem Mass Spectrometry / methods
Source: Web Of Science
Added: August 6, 2018

2015 journal article

Prediction of human population responses to toxic compounds by a collaborative competition

Nature Biotechnology, 33(9), 933–172.

By: F. Eduati, L. Mangravite, T. Wang, H. Tang, J. Bare, R. Huang, T. Norman, M. Kellen ...

Source: NC State University Libraries
Added: August 6, 2018

2015 journal article

Pred-hERG: A Novel web-Accessible Computational Tool for Predicting Cardiac Toxicity

MOLECULAR INFORMATICS, 34(10), 698–701.

co-author countries: Brazil 🇧🇷
author keywords: hERG; QSAR models; web-Server; Screening
MeSH headings : Animals; Arrhythmias, Cardiac / chemically induced; Arrhythmias, Cardiac / metabolism; Cardiotoxins / chemistry; Cardiotoxins / toxicity; Computer Simulation; Databases, Chemical; ERG1 Potassium Channel / antagonists & inhibitors; ERG1 Potassium Channel / chemistry; ERG1 Potassium Channel / metabolism; Humans
Source: Web Of Science
Added: August 6, 2018

2015 journal article

Evaluating the role of admixture in cancer therapy via in vitro drug response and multivariate genome-wide associations

PHARMACOGENOMICS, 16(13), 1451–1463.

author keywords: admixture; cancer; Caucasian; cytotoxicity; drug; genome-wide association study; GWAS; hispanic; in vitro; lymphoblastoid cell lines
MeSH headings : Black or African American; Antineoplastic Combined Chemotherapy Protocols / therapeutic use; Cell Line, Tumor; Cohort Studies; Ethnicity; Genetic Variation; Genome-Wide Association Study; Hispanic or Latino; Humans; Multivariate Analysis; Neoplasms / drug therapy; Neoplasms / genetics; Pharmacogenetics; Treatment Outcome; White People
Source: Web Of Science
Added: August 6, 2018

2015 journal article

The plant parasite Pratylenchus coffeae carries a minimal nematode genome

NEMATOLOGY, 17(6), 621–637.

By: M. Burke n, E. Scholl n, D. Bird n, J. Schaff n, S. Colman*, R. Crowell*, S. Diener*, O. Gordon* ...

Contributors: M. Burke n, E. Scholl n, D. Bird n, J. Schaff n, S. Colman*, R. Crowell*, S. Diener*, O. Gordon* ...

author keywords: Caenorhabditis elegans; lesion nematode; Meloidogyne hapla; migratory endoparasitic nematodes; nematode evolution; protein encoding genes
Sources: Web Of Science, ORCID
Added: August 6, 2018

2015 journal article

The human transcriptome across tissues and individuals

Science, 348(6235), 660–665.

By: M. Mele, P. Ferreira, F. Reverter, D. DeLuca, J. Monlong, M. Sammeth, T. Young, J. Goldmann ...

Source: NC State University Libraries
Added: August 6, 2018

2015 personal communication

Curation of chemogenomics data

Fourches, D., Muratov, E., & Tropsha, A. (2015, August).

MeSH headings : Drug Design; Humans; Information Dissemination; Pharmacogenetics / standards; Small Molecule Libraries / chemistry; Small Molecule Libraries / pharmacology; Software
Source: Web Of Science
Added: August 6, 2018

2015 journal article

Comparative cytogenetic characterization of primary canine melanocytic lesions using array CGH and fluorescence in situ hybridization

CHROMOSOME RESEARCH, 23(2), 171–186.

By: K. Poorman n, L. Borst n, S. Moroff, S. Roy n, P. Labelle, A. Motsinger-Reif n, M. Breen n

author keywords: Canine; Oral melanoma; Cytogenetics; Array; Comparative genomic hybridization
MeSH headings : Animals; Chromosome Aberrations; Cluster Analysis; Comparative Genomic Hybridization; Computational Biology; DNA Copy Number Variations; Dogs; Female; Humans; In Situ Hybridization, Fluorescence; Male; Melanoma / genetics; Melanoma / metabolism; Melanoma / pathology; Mouth Neoplasms / genetics; Mouth Neoplasms / pathology; Penetrance; Skin Neoplasms
Source: Web Of Science
Added: August 6, 2018

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