Works Published in 2004
Displaying all 9 works
Sorted by most recent date added to the index first, which may not be the same as publication date order.
2004 journal article
The Splicing Graph – A Tool for Visualising Gene Structure and Alternative Splicing
Future Drug Discovery, 62–65.
Source: NC State University Libraries
Added: March 19, 2021
2004 conference paper
Multi-locus Linkage Disequilibrium and Haplotype-Based Tests of Association
Computational Methods for SNPs and Haplotype Inference, 139–139.
Event: DIMACS/RECOMB Satellite Workshop at Piscataway, New Jersey, USA on November 21-22, 2002
TL;DR:
Several tests of haplotype association are presented here, along with a comparison of these tests within different LD contexts, and there is no longer a simple relationship with recombination.
(via Semantic Scholar)
Sources: Crossref, ORCID
Added: March 5, 2021
2004 journal article
“In Silico” Design of New Uranyl Extractants Based on Phosphoryl-Containing Podands: QSPR Studies, Generation and Screening of Virtual Combinatorial Library, and Experimental Tests
Journal of Chemical Information and Computer Sciences, 44(4), 1365–1382.
TL;DR:
Computer-aided design of new extractants of the uranyl cation involving three main steps: a QSPR study, generation and screening of a virtual combinatorial library, and synthesis of several predicted compounds and their experimental extraction studies.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
6. Clean Water and Sanitation
(OpenAlex)
Source: Crossref
Added: January 21, 2021
2004 journal article
Effect of Two- and Three-Locus Linkage Disequilibrium on the Power to Detect Marker/Phenotype Associations
Genetics, 168(2), 1029–1040.
MeSH headings : Case-Control Studies; Computational Biology / methods; Computational Biology / statistics & numerical data; Genetic Markers / genetics; Genetic Variation / genetics; Genotype; Haplotypes; Humans; Linkage Disequilibrium / genetics; Phenotype; Polymorphism, Genetic / genetics; Quantitative Trait, Heritable
TL;DR:
This work examines many different patterns of LD defined by both pairwise and joint multilocus LD terms, and examines how changes in these patterns affect the power to detect association when performing single-marker and haplotype-based case-control tests.
(via Semantic Scholar)
www.genetics.org (publisher PDF)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
Sources: Crossref, ORCID
Added: September 5, 2020
2004 journal article
High society (of nematologists)
Genome Biology, 5(11).
Contributors: D. Bird n
MeSH headings : Animals; Bacteria / metabolism; Caenorhabditis / genetics; Caenorhabditis / metabolism; Caenorhabditis / microbiology; Caenorhabditis elegans / genetics; Caenorhabditis elegans / metabolism; Caenorhabditis elegans / microbiology; Chorismate Mutase / genetics; Cytoskeleton / chemistry; Evolution, Molecular; Helminth Proteins / metabolism; Microscopy, Confocal / methods; Nematoda / genetics; Nematoda / metabolism; Nematoda / microbiology; Phylogeny; Plant Cells; Plants / chemistry; Plants / metabolism; Plants / parasitology; United States
TL;DR:
A report on the 43rd annual meeting of the Society of Nematologists (SON), Estes Park, USA, 7-11 August 2004.
(via Semantic Scholar)
Source: ORCID
Added: January 30, 2020
2004 journal article
Integrated analysis of genetic, genomic and proteomic data
Expert Review of Proteomics, 1(1), 67â75.
Contributors: D. Reif* , B. White* & J. Moore *
author keywords: complex systems; data reliability gene expression; joint evalution; protein expression; simulation; single nucleotide polymorphism
MeSH headings : Animals; Computer Simulation; Genomics / methods; Humans; Proteins / analysis; Proteins / genetics; Proteomics / methods; Statistics as Topic
TL;DR:
The idea that the integrated analysis of multiple data types will improve the identification of biomarkers of clinical endpoints, such as disease susceptibility, is presented as a working hypothesis.
(via Semantic Scholar)
Source: ORCID
Added: May 14, 2019
2004 journal article
A survey of SL1-spliced transcipts from the root-lesion nematode Pratylenchus penetrans
MOLECULAR GENETICS AND GENOMICS, 272(2), 138–148.
Contributors: M. Mitreva *, A. Elling*, M. Dante*, A. Kloek*, A. Kalyanaraman*, S. Aluru *, S. Clifton*, D. Bird n, T. Baum *, J. McCarter*
author keywords: Pratylenchus; expressed sequence tags (ESTs); comparative genomics; gene expression; parasite
MeSH headings : Animals; Caenorhabditis elegans / genetics; DNA, Helminth / genetics; Expressed Sequence Tags; Gene Library; Gene Transfer, Horizontal; Genes, Helminth; Multigene Family; Phenotype; Plant Diseases / parasitology; Plants / parasitology; Polymerase Chain Reaction; RNA Interference; RNA, Helminth / genetics; RNA, Spliced Leader / genetics; Species Specificity; Tylenchoidea / genetics; Tylenchoidea / growth & development; Tylenchoidea / pathogenicity
TL;DR:
The generation and analysis of 1928 expressed sequence tags (ESTs) of a splice-leader 1 (SL1) library from mixed life stages of the root-lesion nematode Pratylenchus penetrans are described.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger
(Web of Science)
13. Climate Action
(Web of Science)
Sources: Web Of Science, ORCID
Added: August 6, 2018
2004 review
Signaling between nematodes and plants
[Review of ]. CURRENT OPINION IN PLANT BIOLOGY, 7(4), 372–376.
Contributors: D. Bird n
MeSH headings : Animals; Gene Expression Regulation, Plant; Host-Parasite Interactions; Nematoda / genetics; Nematoda / metabolism; Nematoda / pathogenicity; Plant Roots / metabolism; Plant Roots / parasitology; Plants / metabolism; Plants / parasitology; Signal Transduction
TL;DR:
After hatching in the soil, root-knot nematodes must locate and penetrate a root, migrate into the vascular cylinder, and establish a permanent feeding site, Presumably, these events are accompanied by extensive signaling between the nematode parasite and the host.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger
(Web of Science)
13. Climate Action
(Web of Science)
Sources: Web Of Science, ORCID
Added: August 6, 2018
2004 journal article
Cytokinins play opposite roles in lateral root formation, and nematode and Rhizobial symbioses
PLANT JOURNAL, 38(2), 203–214.
Contributors: D. Lohar n, J. Schaff n, J. Laskey*, J. Kieber *, K. Bilyeu * & D. Bird n
author keywords: cytokinins; lateral root; symbiosis; cytokinin oxidase; ARR; Lotus japonicus
MeSH headings : Animals; Arabidopsis / genetics; Base Sequence; Cytokinins / physiology; DNA, Plant / genetics; Gene Expression Regulation, Developmental; Gene Expression Regulation, Plant; Genes, Plant; Genes, Reporter; Glucuronidase / genetics; Lotus / genetics; Lotus / growth & development; Lotus / microbiology; Lotus / parasitology; Oxidoreductases / genetics; Plant Diseases / genetics; Plant Diseases / parasitology; Plant Roots / growth & development; Plants, Genetically Modified; Promoter Regions, Genetic; Rhizobium / physiology; Symbiosis / physiology; Tylenchoidea / pathogenicity; Tylenchoidea / physiology; Zea mays / genetics
TL;DR:
A dynamic role for cytokinin in lateral root development is suggested, as seen in curled/deformed root hairs, and also in nodule primordia in response to Rhizobial inoculation.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger
(Web of Science)
15. Life on Land
(OpenAlex)
Sources: Web Of Science, ORCID
Added: August 6, 2018
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