Works Published in 2006

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Displaying works 1 - 20 of 21 in total

Sorted by most recent date added to the index first, which may not be the same as publication date order.

2006 journal article

Immunogenetics of CD4 Lymphocyte Count Recovery during Antiretroviral Therapy: An AIDS Clinical Trials Group Study

The Journal of Infectious Diseases, 194(8), 1098–1107.

co-author countries: United States of America 🇺🇸
MeSH headings : Adult; Antiretroviral Therapy, Highly Active; Apoptosis Regulatory Proteins / genetics; CD4 Lymphocyte Count; CD4-Positive T-Lymphocytes / cytology; Female; HIV Infections / blood; HIV Infections / drug therapy; HIV Infections / epidemiology; HIV Infections / genetics; Humans; Interleukin-2 / genetics; Male; Membrane Glycoproteins / genetics; Polymorphism, Genetic; Puerto Rico / epidemiology; Receptors, Interleukin-15; Receptors, Interleukin-2 / genetics; Retrospective Studies; TNF-Related Apoptosis-Inducing Ligand; Tumor Necrosis Factor-alpha / genetics; United States / epidemiology
Source: Crossref
Added: October 29, 2021

2006 journal article

Drug Transporter and Metabolizing Enzyme Gene Variants and Nonnucleoside Reverse-Transcriptase Inhibitor Hepatotoxicity

Clinical Infectious Diseases, 43(6), 779–782.

By: M. Ritchie*, D. Haas*, A. Motsinger*, J. Donahue, H. Erdem, S. Raffanti*, P. Rebeiro, A. George* ...

co-author countries: United States of America 🇺🇸
MeSH headings : Adult; Alkynes; Anti-HIV Agents / adverse effects; Anti-HIV Agents / metabolism; Anti-HIV Agents / therapeutic use; Aryl Hydrocarbon Hydroxylases / genetics; Benzoxazines; Case-Control Studies; Chemical and Drug Induced Liver Injury; Cyclopropanes; Cytochrome P-450 CYP2B6; Cytochrome P-450 CYP3A; Cytochrome P-450 Enzyme System / genetics; Female; Genes, MDR; Genetic Variation; Genotype; HIV Infections / drug therapy; HIV-1; Humans; Liver / drug effects; Liver Diseases / genetics; Liver Diseases / virology; Male; Nevirapine / adverse effects; Nevirapine / metabolism; Nevirapine / therapeutic use; Oxazines / adverse effects; Oxazines / metabolism; Oxazines / therapeutic use; Oxidoreductases, N-Demethylating / genetics; Reverse Transcriptase Inhibitors / adverse effects; Reverse Transcriptase Inhibitors / metabolism; Reverse Transcriptase Inhibitors / therapeutic use
Source: Crossref
Added: October 29, 2021

2006 journal article

Multifactor dimensionality reduction reveals gene–gene interactions associated with multiple sclerosis susceptibility in African Americans

Genes & Immunity, 7(4), 310–315.

By: D. Brassat*, A. Motsinger*, S. Caillier*, H. Erlich*, K. Walker*, L. Steiner*, B. Cree*, L. Barcellos* ...

co-author countries: United States of America 🇺🇸
MeSH headings : Black or African American / genetics; Case-Control Studies; Epistasis, Genetic; Female; Gene Deletion; Genetic Predisposition to Disease; Genotype; Humans; Interleukin-5 Receptor alpha Subunit; Lipopolysaccharide Receptors / genetics; Male; Multifactorial Inheritance; Multiple Sclerosis / genetics; Multiple Sclerosis / immunology; Polymorphism, Genetic; Polymorphism, Single Nucleotide; Receptors, Interleukin / genetics; Receptors, Interleukin-4 / genetics
Source: Crossref
Added: October 29, 2021

2006 chapter

Comparison of Neural Network Optimization Approaches for Studies of Human Genetics

In F. Rothlauf (Ed.), Applications of Evolutionary Computing. EvoWorkshops 2006 (pp. 103–114).

By: A. Motsinger*, S. Dudek*, L. Hahn* & M. Ritchie*

co-author countries: United States of America 🇺🇸

Ed(s): F. Rothlauf

Source: Crossref
Added: October 29, 2021

2006 journal article

The effect of reduction in cross-validation intervals on the performance of multifactor dimensionality reduction

Genetic Epidemiology, 30(6), 546–555.

By: A. Motsinger* & M. Ritchie*

co-author countries: United States of America 🇺🇸
author keywords: model validation; MDR; epistasis; gene-gene interactions
MeSH headings : Alzheimer Disease / genetics; Genetic Predisposition to Disease / genetics; Genotype; Humans; Models, Genetic; Multifactorial Inheritance; Polymorphism, Genetic; Risk Assessment / statistics & numerical data
Source: Crossref
Added: October 29, 2021

2006 journal article

A unified mixed-model method for association mapping that accounts for multiple levels of relatedness

Nature Genetics, 38(2), 203–208.

By: J. Yu*, G. Pressoir*, W. Briggs*, I. Vroh Bi*, M. Yamasaki*, J. Doebley*, M. McMullen*, B. Gaut* ...

co-author countries: United States of America 🇺🇸
MeSH headings : Gene Expression; Genetic Techniques; Genetic Variation; Heredity / genetics; Humans; Models, Genetic; Phenotype; Quantitative Trait, Heritable; Research Design; Zea mays / genetics
Sources: Crossref, ORCID
Added: January 25, 2021

2006 journal article

Benchmarking of Linear and Nonlinear Approaches for Quantitative Structure−Property Relationship Studies of Metal Complexation with Ionophores

Journal of Chemical Information and Modeling, 46(2), 808–819.

By: I. Tetko*, V. Solov'ev*, A. Antonov*, X. Yao*, J. Doucet*, B. Fan*, F. Hoonakker*, D. Fourches* ...

co-author countries: Germany 🇩🇪 France 🇫🇷 Russian Federation 🇷🇺 Ukraine 🇺🇦
MeSH headings : Algorithms; Europium / chemistry; Ionophores / chemistry; Linear Models; Models, Theoretical; Nonlinear Dynamics; Organometallic Compounds / chemistry; Quantitative Structure-Activity Relationship; Silver / chemistry; Software Validation
Source: Crossref
Added: August 28, 2020

2006 journal article

Detection of putative secreted proteins in the plant-parasitic nematode Heterodera schachtii

Parasitology Research, 98(5), 414–424.

co-author countries: Belgium 🇧🇪 United States of America 🇺🇸

Contributors: B. Vanholme*, M. Mitreva*, W. Van Criekinge*, M. Logghe*, D. Bird n, J. McCarter*, G. Gheysen*

MeSH headings : Animals; Computational Biology / methods; Contig Mapping; DNA, Helminth / chemistry; DNA, Helminth / genetics; Expressed Sequence Tags; Gene Library; Glycoside Hydrolases / chemistry; Glycoside Hydrolases / genetics; Helminth Proteins / genetics; Plants / parasitology; Protein Sorting Signals / genetics; Protein Structure, Tertiary / genetics; Tylenchoidea / genetics
Source: ORCID
Added: January 30, 2020

2006 journal article

Visual analysis of statistical results from microarray studies of human breast cancer.

Oncology Reports, c, 1043–1047. http://europepmc.org/abstract/med/16525698

By: D. Reif & J. Moore

Source: ORCID
Added: May 14, 2019

2006 article

Integrated analysis of genetic and proteomic data.

http://europepmc.org/theses/ETH/7299

By: D. Reif & V. Libraries

Source: ORCID
Added: May 14, 2019

2006 journal article

Visual analysis of statistical results from microarray studies of human breast cancer

Oncol Rep, 4(4), 1043–1047.

By: D. Reif* & J. Moore

Contributors: D. Reif* & J. Moore

MeSH headings : Antineoplastic Agents / therapeutic use; Breast Neoplasms / drug therapy; Breast Neoplasms / genetics; Data Interpretation, Statistical; Databases, Genetic; Female; Gene Expression Profiling; Humans; Oligonucleotide Array Sequence Analysis; Software
Source: ORCID
Added: May 14, 2019

2006 conference paper

Understanding the evolutionary process of grammatical evolution neural networks for feature selection in genetic epidemiology

Proceedings of the 2006 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology, CIBCB'06, 263–270.

By: A. Motsinger*, D. Reif*, S. Dudek* & M. Ritchie*

co-author countries: United States of America 🇺🇸

Contributors: A. Motsinger*, D. Reif*, S. Dudek* & M. Ritchie*

Source: ORCID
Added: May 14, 2019

2006 journal article

Machine Learning for Detecting Gene-Gene Interactions

Applied Bioinformatics, 5(2), 77–88.

By: B. McKinney*, D. Reif*, M. Ritchie* & J. Moore*

co-author countries: United States of America 🇺🇸

Contributors: B. McKinney*, D. Reif*, M. Ritchie* & J. Moore*

MeSH headings : Algorithms; Animals; Artificial Intelligence; Genome, Human; Genomics / methods; Genotype; Humans; Models, Genetic; Models, Statistical; Neural Networks, Computer; Polymorphism, Single Nucleotide
Source: ORCID
Added: May 14, 2019

2006 conference paper

Feature selection using a random forests classifier for the integrated analysis of multiple data types

Proceedings of the 2006 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology, CIBCB'06, 171–178.

Contributors: D. Reif*, A. Motsinger*, B. McKinney*, J. Crowe Jr. & J. Moore

Source: ORCID
Added: May 14, 2019

2006 journal article

Cytokine expression patterns associated with systemic adverse events following smallpox immunization.

Journal of Infectious Diseases, 194(4), 444–453.

By: B. McKinney, D. Reif*, M. Rock, K. Edwards, S. Kingsmore, J. Moore, C. Je

Contributors: B. McKinney, D. Reif*, M. Rock, K. Edwards, S. Kingsmore, J. Moore, J. Crowe Jr.

MeSH headings : Adolescent; Adult; Chemokine CCL11; Chemokines, CC / blood; Chemokines, CC / immunology; Cytokines / blood; Cytokines / immunology; Decision Trees; Female; Granulocyte Colony-Stimulating Factor / blood; Granulocyte Colony-Stimulating Factor / immunology; Humans; Intercellular Adhesion Molecule-1 / blood; Intercellular Adhesion Molecule-1 / immunology; Male; Skin Diseases, Vesiculobullous / chemically induced; Skin Diseases, Vesiculobullous / pathology; Skin Diseases, Vesiculobullous / prevention & control; Smallpox / prevention & control; Smallpox Vaccine / adverse effects; Tissue Inhibitor of Metalloproteinase-2 / blood; Tissue Inhibitor of Metalloproteinase-2 / immunology; Vaccinia virus / immunology
Source: ORCID
Added: May 14, 2019

2006 journal article

Predicting Shine-Dalgarno sequence locations exposes genome annotation errors

PLOS COMPUTATIONAL BIOLOGY, 2(5), 454–466.

co-author countries: United States of America 🇺🇸
MeSH headings : Base Sequence; Codon, Initiator / genetics; Computational Biology; Escherichia coli / genetics; Gene Expression Regulation, Bacterial / genetics; Genome, Bacterial / genetics; Hydrogen Bonding; Models, Genetic; Peptide Chain Initiation, Translational / genetics; RNA, Messenger / genetics; RNA, Messenger / metabolism; RNA, Ribosomal / genetics; RNA, Ribosomal / metabolism; Research Design
Source: Web Of Science
Added: August 6, 2018

2006 journal article

A murine specific expansion of the Rhox cluster involved in embryonic stem cell biology is under natural selection

BMC Genomics, 7.

By: M. Jackson, A. Watt, P. Gautier, D. Gilchrist, J. Driehaus, G. Graham, J. Keebler, F. Prugnolle, P. Awadalla, L. Forrester

Source: NC State University Libraries
Added: August 6, 2018

2006 journal article

A method for isolation of Pasteuria penetrans endospores for bioassay and genomic studies

Journal of Nematology, 38(1), 165–167. http://www.scopus.com/inward/record.url?eid=2-s2.0-34248330929&partnerID=MN8TOARS

By: J. Waterman, D. Bird & C. Opperman

Contributors: J. Waterman, D. Bird & C. Opperman

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2006 journal article

A method for generating Meloidogyne incognita males

Journal of Nematology, 38(2), 192–194. http://www.scopus.com/inward/record.url?eid=2-s2.0-33750134280&partnerID=MN8TOARS

By: D. Snyder, C. Opperman & D. Bird

Contributors: D. Snyder, C. Opperman & D. Bird

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2006 journal article

Nematode gene sequences: Update for December 2005

Journal of Nematology, 37(4), 417–421.

By: J. McCarter, D. Bird & M. Mitreva

Source: NC State University Libraries
Added: August 6, 2018

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