Works Published in 2006
Displaying works 1 - 20 of 134 in total
Sorted by most recent date added to the index first, which may not be the same as publication date order.
2006 journal article
A procedure to quantify organic antistrip additives in asphalt binders and mixes
Journal of Testing and Evaluation, 34(4), 269–274. http://www.scopus.com/inward/record.url?eid=2-s2.0-33845239692&partnerID=MN8TOARS
Contributors: C. Chun, A. Tayebali & D. Knappe
Source: ORCID
Added: September 9, 2023
2006 conference paper
Removal of sulfonamides and associated antimicrobial activity by UV photolysis and UV/H2O2 processes
American Water Works Association - AWWA Annual Conference and Exposition, ACE 2006: The World's Water Event, 285–289. http://www.scopus.com/inward/record.url?eid=2-s2.0-84871626879&partnerID=MN8TOARS
Contributors: C. Baeza & D. Knappe
Source: ORCID
Added: September 9, 2023
2006 thesis
Pesticide regulations in drinking water versus other beverages: A case of an unjustified discrepancy
(MSc thesis,). Department of Environmental Engineering, Technical University of Denmark.
Source: NC State University Libraries
Added: July 2, 2023
2006 journal article
Up-regulation of glucose regulated protein of M-r-78KDa (GRP78) followed by cisplatin treatment leads to mitochondrial mediated apoptosis through caspase-2 activation
Cancer Research. https://publons.com/wos-op/publon/54906422/
Contributors: S. Gaddameedhi , M. Ahmad & S. Chatterjee
Source: ORCID
Added: November 14, 2022
2006 journal article
Dynamic Gene Expression Changes Precede Dioxin-Induced Liver Pathogenesis in Medaka Fish
Toxicological Sciences, 89(2), 524–534.
author keywords: medaka; dioxin; liver; aryl hydrocarbon receptor; gene expression; transcription
MeSH headings : Animals; Cytochrome P-450 CYP1A1 / genetics; Cytochrome P-450 CYP1A2 / genetics; Dose-Response Relationship, Drug; Gene Expression / drug effects; Gene Expression Profiling; Injections, Intraperitoneal; Liver / drug effects; Liver / metabolism; Liver / pathology; Male; Oligonucleotide Array Sequence Analysis; Oryzias; Polychlorinated Dibenzodioxins / toxicity; Receptors, Aryl Hydrocarbon / genetics; Reverse Transcriptase Polymerase Chain Reaction; Time Factors
TL;DR:
The data suggest that the cellular response to dioxin involves both AHRE- and non-AHRE-mediated transcription, and that coupling gene expression profiling with analysis of morphologic pathogenesis is essential for establishing temporal relationships between transcriptional changes, toxicity, and adaptation to hepatic injury.
(via Semantic Scholar)
academic.oup.com (publisher PDF)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
14. Life Below Water
(OpenAlex)
Sources: Crossref, NC State University Libraries
Added: September 15, 2022
2006 journal article
A comprehensive performance evaluation of MM5-CMAQ for the Summer 1999 Southern Oxidants Study episode—Part II: Gas and aerosol predictions
Atmospheric Environment, 40(26), 4839–4855.
author keywords: model evaluation; CMAQ; SOS; PM2.5; ozone
UN Sustainable Development Goal Categories
11. Sustainable Cities and Communities
(Web of Science)
13. Climate Action
(Web of Science)
Source: Crossref
Added: April 12, 2022
2006 journal article
A comprehensive performance evaluation of MM5-CMAQ for the summer 1999 southern oxidants study episode, Part III: Diagnostic and mechanistic evaluations
Atmospheric Environment, 40(26), 4856–4873.
author keywords: CMAQ; SOS; sensitivity study; ozone; PM2.5; particle size distribution
UN Sustainable Development Goal Categories
11. Sustainable Cities and Communities
(Web of Science)
13. Climate Action
(Web of Science)
Source: Crossref
Added: April 12, 2022
2006 journal article
In Vivo and Scanning Electron Microscopy Imaging of Upconverting Nanophosphors inCaenorhabditiselegans
Nano Letters, 6(2), 169–174.
MeSH headings : Animals; Caenorhabditis elegans / chemistry; Microscopy, Electron, Scanning / methods; Nanostructures / chemistry; Particle Size; Phosphorus / chemistry; Sensitivity and Specificity; Spectrometry, X-Ray Emission / methods; Surface Properties
TL;DR:
It is shown here that upconversion phosphors can be imaged both by infrared excitation and in a scanning electron microscope, and it is confirmed using energy-dispersive X-ray analysis that the up-conversion nanoparticles can be identified in a scan electron microscope at high spatial resolution.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
7. Affordable and Clean Energy
(OpenAlex)
Sources: Crossref, NC State University Libraries
Added: January 7, 2022
2006 journal article
Quantitative Determination of and Effect of Prolonged Heating on Amine-Based Antistrip Additive Contents in Asphalt Binders and Mixes
Journal of the Association of Asphalt Paving Technologists, 75, 1095–1119.
Source: NC State University Libraries
Added: December 24, 2021
2006 conference paper
Comparison of North American and Paleartic Unionid Bivalves: A Contrast: The Classifications Of Haas And Starobogatov
Bogan, A. E., Mandryka, O., Mock, K., Hoeh, W., Raley, M., & Levine, J. (2006, September). Presented at the First Baltic Symposium of Malacology: Diversity and Conservation of European Molluscan Fauna, Riga, Latvia.
Event: First Baltic Symposium of Malacology: Diversity and Conservation of European Molluscan Fauna at Riga, Latvia
Source: NC State University Libraries
Added: September 30, 2021
2006 conference paper
Rapid And Specific Real-Time Polymerase Chain Reaction Method For Detection of Viable Salmonella spp. in Poultry Feed and Feedstuffs
Li, X., & Levine, J. F. (2006, July). Presented at the Poultry Science Association Annual Meeting, Edmonton, CA.
Event: Poultry Science Association Annual Meeting at Edmonton, CA
Source: NC State University Libraries
Added: September 30, 2021
2006 journal article
Structural basis for DNA recognition and processing by UvrB
Nature Structural & Molecular Biology, 13(4), 360–364.
MeSH headings : Bacillus / genetics; Bacillus / metabolism; Bacterial Proteins / chemistry; Bacterial Proteins / metabolism; Base Sequence; Crystallography, X-Ray; DNA Damage; DNA Repair; DNA, Bacterial / chemistry; DNA, Bacterial / genetics; DNA, Bacterial / metabolism; Macromolecular Substances; Models, Molecular; Static Electricity
TL;DR:
The first structure of a UvrB–double-stranded DNA complex is reported, providing insights into the mechanism by which Uvr B binds DNA, leading to formation of the preincision complex.
(via Semantic Scholar)
Sources: Crossref, ORCID
Added: September 23, 2021
2006 journal article
UvrB Domain 4, an Autoinhibitory Gate for Regulation of DNA Binding and ATPase Activity
Journal of Biological Chemistry, 281(22), 15227–15237.
MeSH headings : Adenosine Triphosphatases / genetics; Adenosine Triphosphatases / metabolism; Amino Acid Sequence; Bacillus / genetics; Bacillus / metabolism; Bacterial Proteins / chemistry; Bacterial Proteins / genetics; Bacterial Proteins / metabolism; Base Sequence; DNA Damage; DNA Repair; DNA, Bacterial / genetics; DNA, Bacterial / metabolism; Dimerization; Kinetics; Models, Biological; Molecular Sequence Data; Protein Structure, Quaternary; Protein Structure, Tertiary; Sequence Homology, Amino Acid
TL;DR:
Using atomic force microscopy and biochemical assays, it is found that truncation of domain 4 of Bacillus caldotenax UvrB (UvrBΔ4) leads to multiple changes in protein function and is proposed that other than its previously discovered role in regulating protein-protein interactions, domain 4 is an autoinhibitory domain regulating the DNA binding and ATPase activities of Uvr B.
(via Semantic Scholar)
Sources: Crossref, ORCID
Added: September 23, 2021
2006 journal article
The C-terminal Zinc Finger of UvrA Does Not Bind DNA Directly but Regulates Damage-specific DNA Binding
Journal of Biological Chemistry, 281(36), 26370–26381.
MeSH headings : Adenosine Triphosphatases / chemistry; Adenosine Triphosphatases / genetics; Adenosine Triphosphatases / metabolism; Adenosine Triphosphate / metabolism; Amino Acid Sequence; DNA / metabolism; DNA Damage; DNA Helicases / genetics; DNA Helicases / metabolism; DNA Repair; DNA-Binding Proteins / chemistry; DNA-Binding Proteins / genetics; DNA-Binding Proteins / metabolism; Dimerization; Escherichia coli / genetics; Escherichia coli / metabolism; Escherichia coli Proteins / chemistry; Escherichia coli Proteins / genetics; Escherichia coli Proteins / metabolism; Magnesium / metabolism; Models, Molecular; Molecular Sequence Data; Mutation; Protein Binding; Protein Structure, Quaternary; Protein Structure, Secondary; Recombinant Fusion Proteins / genetics; Recombinant Fusion Proteins / metabolism; Sequence Alignment; Ultraviolet Rays; Zinc Fingers
TL;DR:
Data demonstrate that the C-terminal zinc finger of UvrA is required for regulation of damage-specific DNA binding.
(via Semantic Scholar)
Sources: Crossref, ORCID
Added: September 23, 2021
2006 conference paper
Detection Of Spring Viremia Of Carp Virus By Loop Mediated Isothermal Amplification (Lamp)
Shivappa, R. B., Savan, R., Masahiro, S., & Levine, J. F. (2006, November). Presented at the International Symposium on Aquatic Animal Health, San Francisco, CA.
Event: International Symposium on Aquatic Animal Health at San Francisco, CA
Source: NC State University Libraries
Added: September 18, 2021
2006 chapter
Protistan community structure
In Manual of Environmental Microbiology.
Source: ORCID
Added: August 4, 2021
2006 chapter
Bivalves
In G. A. Lewbart (Ed.), Invertebrate Medicine (pp. 91–113).
Ed(s): G. Lewbart n
UN Sustainable Development Goal Categories
2. Zero Hunger
(OpenAlex)
Source: Crossref
Added: April 26, 2021
2006 journal article
Increased levels of 4-hydroxynonenal and acrolein, neurotoxic markers of lipid peroxidation, in the brain in Mild Cognitive Impairment and early Alzheimer's disease
Neurobiology of Aging, 27(8), 1094–1099.
Contributors: T. Williams* , B. Lynn *, W. Markesbery* & M. Lovell *
author keywords: early Alzheimer's disease; Mild Cognitive Impairment; lipid peroxidation; oxidative stress; Alzheimer's disease
MeSH headings : Acrolein / metabolism; Aged, 80 and over; Aldehydes / metabolism; Alzheimer Disease / metabolism; Biomarkers / metabolism; Brain / metabolism; Cognition Disorders / metabolism; Female; Humans; Lipid Peroxidation; Male; Tissue Distribution
TL;DR:
The results suggest that lipid peroxidation occurs early in the pathogenesis of AD, and levels of HNE in HPG and SMTG and a significant increase in acrolein in all three brain regions studied.
(via Semantic Scholar)
Source: ORCID
Added: April 8, 2021
2006 journal article
Proteomic profile changes in membranes of ethanol-tolerant Clostridium thermocellum.
Applied Microbiology and Biotechnology, 2.
author keywords: Clostridium thermocellum; ethanol tolerance; proteomics
MeSH headings : Bacterial Proteins / genetics; Bacterial Proteins / metabolism; Cell Membrane / metabolism; Clostridium thermocellum / drug effects; Clostridium thermocellum / genetics; Clostridium thermocellum / growth & development; Clostridium thermocellum / metabolism; Ethanol / pharmacology; Gene Expression Profiling; Gene Expression Regulation, Bacterial; Industrial Microbiology / methods; Membrane Proteins / genetics; Membrane Proteins / metabolism; Proteomics
TL;DR:
Overall, the results suggested that membrane-associated proteins in the ethanol-adapted strain are either being synthesized in lower quantities or not properly incorporated into the cell membrane.
(via Semantic Scholar)
Source: ORCID
Added: April 8, 2021
2006 journal article
A novel Bicine running buffer system for doubled sodium dodecyl sulfate – polyacrylamide gel electrophoresis of membrane proteins
Electrophoresis, 27(14), 2984–2995.
Contributors: T. Williams* , J. Combs*, A. Thakur*, H. Strobel* & B. Lynn *
author keywords: Bicine; doubled SDS-PAGE; MALDI-TOF-MS; membrane proteome
MeSH headings : Bacterial Proteins / analysis; Bacterial Proteins / isolation & purification; Buffers; Clostridium thermocellum / chemistry; Electrophoresis, Capillary; Electrophoresis, Polyacrylamide Gel / methods; Glycine / analogs & derivatives; Glycine / chemistry; Membrane Proteins / analysis; Membrane Proteins / isolation & purification
TL;DR:
The data clearly indicated that Bicine‐dSDS‐PAGE is a superior method for the analysis of membrane proteins, providing enhanced resolution and protein representation.
(via Semantic Scholar)
Sources: ORCID, Crossref, NC State University Libraries
Added: April 8, 2021
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