Genetics - 2002

Heinrich, J. C., Li, X., Henry, R. A., Haack, N., Stringfellow, L., Heath, A. C. G., & Scott, M. J. (2002). Germ‐line transformation of the Australian sheep blowfly <i>Lucilia cuprina. Insect Molecular Biology, 11(1), 1–10. https://doi.org/10.1046/j.0962-1075.2001.00301.x

Balding, D. J., Carothers, A. D., Marchini, J. L., Cardon, L. R., Vetta, A., Griffiths, B., … Gabrielson, E. (2002). Discussion on the meeting on 'Statistical modelling and analysis of genetic data'. Journal of the Royal Statistical Society: Series B (Statistical Methodology), 64(4), 737–775. https://doi.org/10.1111/1467-9868.00359

Zhao, Y., Hull, A. K., Gupta, N. R., Goss, K. A., Alonso, J., Ecker, J. R., … Celenza, J. L. (2002). Trp-dependent auxin biosynthesis in Arabidopsis: involvement of cytochrome P450s CYP79B2 and CYP79B3. Genes & Development, 16(23), 3100–3112.

Friedrichsen, D. M., Nemhauser, J., Muramitsu, T., Maloof, J. N., Alonso, J., Ecker, J. R., … Chory, J. (2002). Three redundant brassinosteroid early response genes encode putative bHLH transcription factors required for normal growth. Genetics, 162(3), 1445–1456.

Zheng, H., Bednarek, S. Y., Sanderfoot, A. A., Alonso, J., Ecker, J. R., & Raikhel, N. V. (2002). NPSN11 is a cell plate-associated SNARE protein that interacts with the syntaxin KNOLLE. Plant Physiology, 129(2), 530–539.

Schroeder, D. F., Gahrtz, M., Maxwell, B. B., Cook, R. K., Kan, J. M., Alonso, J. M., … Chory, J. (2002). De-Etiolated 1 and Damaged DNA Binding Protein 1 Interact to Regulate< i> Arabidopsis</i> Photomorphogenesis. Current Biology, 12(17), 1462–1472.

Hu, J., Aguirre, M., Peto, C., Alonso, J., Ecker, J., & Chory, J. (2002). A role for peroxisomes in photomorphogenesis and development of Arabidopsis. Science, 297(5580), 405–409.

Franks, R. G., Wang, C., Levin, J. Z., Liu, Z., & Development. (2002). SEUSS, a member of a novel family of plant regulatory proteins, represses floral homeotic gene expression with LEUNIG. 129(1), 253–263. Retrieved from http://europepmc.org/abstract/med/11782418

Franks, R. G., Wang, C., Levin, J. Z., & Liu, Z. (2002). SEUSS, a member of a novel family of plant regulatory proteins, represses floral homeotic gene expression with LEUNIG. Development, 129(1), 253–263. Retrieved from http://www.scopus.com/inward/record.url?eid=2-s2.0-0036333380&partnerID=MN8TOARS

Dvorak, W. S., Hamrick, J. L., Furman, B. J., Hodge, G. R., & Jordan, A. P. (2002). Conservation strategies for Pinus maximinoi based on provenance, RAPD and allozyme information. Forest Genetics, 9(4), 263.

Buckler, E., Doebley, J., Gaut, B., Goodman, M., Kresovich, S., Muse, S., & Weir, B. (2002). Evolutionary genomics of maize. Maize Genetics Cooperation Newsletter, (76), 86.

Washburn, S. P., Silvia, W. J., Brown, C. H., McDaniel, B. T., & McAllister, A. J. (2002). Trends in reproductive performance in Southeastern Holstein and Jersey DHI herds. JOURNAL OF DAIRY SCIENCE, 85(1), 244–251. https://doi.org/10.3168/jds.S0022-0302(02)74073-3

MacKay, T. F. C. (2002). The nature of quantitative genetic variation for Drosophila longevity. Mechanisms of Ageing and Development, 123(2-3), 95–104. https://doi.org/10.1016/S0047-6374(01)00330-X

Barrangou, R., Yoon, S. S., Breidt, F., Fleming, H. P., & Klaenhammer, T. R. (2002). Identification and characterization of Leuconostoc fallax strains isolated from an industrial sauerkraut fermentation. APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 68(6), 2877–2884. https://doi.org/10.1128/AEM.68.6.2877-2884.2002

Whitt, SR, Wilson, L. M., Tenaillon, M. I., Gaut, B. S., & Buckler, E. S. (2002). Genetic diversity and selection in the maize starch pathway. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 99(20), 12959–12962. https://doi.org/10.1073/pnas.202476999

Callaway, A. S., Abranches, R., Scroggs, J., Allen, G. C., & Thompson, W. F. (2002). High-throughput transgene copy number estimation by competitive PCR. PLANT MOLECULAR BIOLOGY REPORTER, 20(3), 265–277. https://doi.org/10.1007/BF02782462

Gibson, G. (2002). A genetic attack on the defense complex. BIOESSAYS, 24(6), 487–489. https://doi.org/10.1002/bies.10104

Bebout, B. M., Carpenter, S. P., Des Marais, D. J., Discipulo, M., Embaye, T., Garcia-Pichel, F., … Turk, K. (2002). Long-term manipulations of intact microbial mat communities in a greenhouse collaboratory: Simulating Earth's present and past field environments. ASTROBIOLOGY, 2(4), 383–402. https://doi.org/10.1089/153110702762470491

Johnson, E. S., Wolff, M. F., Wernsman, E. A., & Rufty, R. C. (2002). Marker-assisted selection for resistance to black shank disease in tobacco. PLANT DISEASE, 86(12), 1303–1309. https://doi.org/10.1094/PDIS.2002.86.12.1303

Remington, D. L., & Purugganan, M. D. (2002). GAI homologues in the Hawaiian silversword alliance (Asteraceae-Madiinae): Molecular evolution of growth regulators in a rapidly diversifying plant lineage. MOLECULAR BIOLOGY AND EVOLUTION, 19(9), 1563–1574. https://doi.org/10.1093/oxfordjournals.molbev.a004218

Mermelstein, N. H., Fennema, O. R., Batt, C. A., Goff, H. D., Griffiths, M. W., Hoover, D. G., … al. (2002). Food research trends - 2003 and beyond. Food Technology, 56(12), 30-.

Thorne, J. L., & Kishino, H. (2002). Divergence time and evolutionary rate estimation with multilocus data. SYSTEMATIC BIOLOGY, 51(5), 689–702. https://doi.org/10.1080/10635150290102456

Klaenhammer, T., Altermann, E., Arigoni, F., Bolotin, A., Breidt, F., Broadbent, J., … al. (2002). Discovering lactic acid bacteria by genomics. Antonie Van Leeuwenhoek, 82(1-4), 29–58. https://doi.org/10.1007/978-94-017-2029-8_3

Johnson, E. S., Wolff, M. F., Wernsman, E. A., Atchely, W. R., & Shew, H. D. (2002). Origin of the black shank resistance gene, Ph, in tobacco cultivar Coker 371-gold. PLANT DISEASE, 86(10), 1080–1084. https://doi.org/10.1094/PDIS.2002.86.10.1080

Robertson, L. K., Dey, B. K., Campos, A. R., & Mahaffey, J. W. (2002). Expression of the Drosophila gene disconnected using the UAS/GAL4 system. GENESIS, 34(1-2), 103–106. https://doi.org/10.1002/gene.10123

Wu, R. L., Ma, C. X., Painter, I., & Zeng, Z. B. (2002). Simultaneous maximum likelihood estimation of linkage and linkage phases in outcrossing species. THEORETICAL POPULATION BIOLOGY, 61(3), 349–363. https://doi.org/10.1006/tpbi.2002.1577

Carrillo, R., & Gibson, G. (2002). Unusual genetic architecture of natural variation affecting drug resistance in Drosophila melanogaster. GENETICAL RESEARCH, 80(3), 205–213. https://doi.org/10.1017/S0016672302005888

Niblack, T. L., Arelli, P. R., Noel, G. R., Opperman, C. H., Ore, J. H., Schmitt, D. P., … Tylka, G. L. (2002). A revised classification scheme for genetically diverse populations of Heterodera glycines. Journal of Nematology, 34(4), 279–288.

Egelkrout, E. M., Mariconti, L., Settlage, S. B., Cella, R., Robertson, D., & Hanley-Bowdoin, L. (2002). Two E2F elements regulate the proliferating cell nuclear antigen promoter differently during leaf development. PLANT CELL, 14(12), 3225–3236. https://doi.org/10.1105/tpc.006403

Bustamante, C. D., Nielsen, R., Sawyer, S. A., Olsen, K. M., Purugganan, M. D., & Hartl, D. L. (2002). The cost of inbreeding in Arabidopsis. NATURE, 416(6880), 531–534. https://doi.org/10.1038/416531a

Leips, J., & Mackay, T. F. C. (2002). The complex genetic architecture of Drosophila life span. EXPERIMENTAL AGING RESEARCH, 28(4), 361–390. https://doi.org/10.1080/03610730290080399

Tuler, T. R., Callanan, M. J., & Klaenhammer, T. R. (2002). Overexpression of peptidases in Lactococcus and evaluation of their release from leaky cells. JOURNAL OF DAIRY SCIENCE, 85(10), 2438–2450. https://doi.org/10.3168/jds.S0022-0302(02)74326-9

Fink, R. C., & Scandalios, J. G. (2002). Molecular evolution and structure-function relationships of the superoxide dismutase gene families in angiosperms and their relationship to other eukaryotic and prokaryotic superoxide dismutases. ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS, 399(1), 19–36. https://doi.org/10.1006/abbi.2001.2739

Durmaz, E., Madsen, S. A., Israelsen, H., & Klaenhammer, T. R. (2002). Lactococcus lactis lytic bacteriophages of the p335 group are inhibited by overexpression of a truncated CI repressor. JOURNAL OF BACTERIOLOGY, 184(23), 6532–6543. https://doi.org/10.1128/JB.184.23.6532-6543.2002

Nagara, S., Hanley-Bowdoin, L., & Robertson, D. (2002). Host DNA replication is induced by geminivirus infection of differentiated plant cells. PLANT CELL, 14(12), 2995–3007. https://doi.org/10.1105/tpc.005777

Guan, L. Q. M., & Scandalios, J. G. (2002). Catalase gene expression in response to auxin-mediated developmental signals. PHYSIOLOGIA PLANTARUM, 114(2), 288–295. https://doi.org/10.1034/j.1399-3054.2002.1140215.x

Rauh, B. L., Basten, C., & Buckler, E. S. (2002). Quantitative trait loci analysis of growth response to varying nitrogen sources in Arabidopsis thaliana. THEORETICAL AND APPLIED GENETICS, 104(5), 743–750. https://doi.org/10.1007/s00122-001-0815-y

Xie, J. H., Wehner, T. C., & Conkling, M. A. (2002). PCR-based single-strand conformation polymorphism (SSCP) analysis to clone nine aquaporin genes in cucumber. Journal of the American Society for Horticultural Science, 127(6), 925–930.

Jackson, R. B., Linder, C. R., Lynch, M., Purugganan, M., Somerville, S., & Thayer, S. S. (2002, September). Linking molecular insight and ecological research. TRENDS IN ECOLOGY & EVOLUTION, Vol. 17, pp. 409–414. https://doi.org/10.1016/S0169-5347(02)02571-5

Seo, T. K., Thorne, J. L., Hasegawa, M., & Kishino, H. (2002). Estimation of effective population size of HIV-1 within a host: A pseudomaximum-likelihood approach. Genetics, 160(4), 1283–1293.

Fry, J. D., & Heinsohn, S. L. (2002). Environment dependence of mutational parameters for viability in Drosophila melanogaster. Genetics, 161(3), 1155–1167.

Love, J., Allen, G. C., Gatz, C., & Thompson, W. F. (2002). Differential Top10 promoter regulation by six tetracycline analogues in plant cells. JOURNAL OF EXPERIMENTAL BOTANY, 53(376), 1871–1877. https://doi.org/10.1093/jxb/erf050

Olsen, K. M., Womack, A., Garrett, A. R., Suddith, J. I., & Purugganan, M. D. (2002). Contrasting evolutionary forces in the Arabidopsis thaliana floral developmental pathway. Genetics, 160(4), 1641–1650.

Matsuoka, Y., Vigouroux, Y., Goodman, M. M., Sanchez, G. J., Buckler, E., & Doebley, J. (2002). A single domestication for maize shown by multilocus microsatellite genotyping. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 99(9), 6080–6084. https://doi.org/10.1073/pnas.052125199

Kong, L. J., & Hanley-Bowdoin, L. (2002). A geminivirus replication protein interacts with a protein kinase and a motor protein that display different expression patterns during plant development and infection. PLANT CELL, 14(8), 1817–1832. https://doi.org/10.1105/tpc.003681

Buckler, E. S., & Thornsberry, J. M. (2002). [Review of Plant molecular diversity and applications to genomics]. CURRENT OPINION IN PLANT BIOLOGY, 5(2), 107–111. https://doi.org/10.1016/S1369-5266(02)00238-8

Miller, SR, Martin, M., Touchton, J., & Castenholz, R. W. (2002). Effects of nitrogen availability on pigmentation and carbon assimilation in the cyanobacterium Synechococcus sp strain SH-94-5. ARCHIVES OF MICROBIOLOGY, 177(5), 392–400. https://doi.org/10.1007/s00203-002-0404-8

Geiger-Thornsberry, G. L., & Mackay, T. F. C. (2002). Association of single-nucleotide polymorphisms at the Delta locus with genotype by environment interaction for sensory bristle number in Drosophila melanogaster. GENETICS RESEARCH, 79(3), 211–218. https://doi.org/10.1017/S0016672302005621

Abdallah, J. M., McDaniel, B. T., & Tabbaa, M. J. (2002). Relationships of productive life evaluations with changes in evaluations for yields. JOURNAL OF DAIRY SCIENCE, 85(3), 677–681. https://doi.org/10.3168/jds.s0022-0302(02)74123-4

Abdallah, J. M., & McDaniel, B. T. (2002). Proven and young Holstein: Bulls compared for daughter yields, productive life, somatic cell score, and inbreeding. JOURNAL OF DAIRY SCIENCE, 85(3), 665–669. https://doi.org/10.3168/jds.s0022-0302(02)74121-0

Abdallah, J. M., & McDaniel, B. T. (2002). Prediction of most recent evaluations of Holstein bulls from first available pedigree information. JOURNAL OF DAIRY SCIENCE, 85(3), 670–676. https://doi.org/10.3168/jds.s0022-0302(02)74122-2

Luo, A. H., Cannon, E. H., Wekesa, K. S., Lyman, R. F., Vandenbergh, J. G., & Anholt, R. R. H. (2002). Impaired olfactory behavior in mice deficient in the a subunit of G(0). BRAIN RESEARCH, 941(1-2), 62–71. https://doi.org/10.1016/S0006-8993(02)02566-0

Abdallah, J. M., & McDaniel, B. T. (2002). Heritability of changes in genetic evaluations of dairy bulls from first to later records of daughters. JOURNAL OF DAIRY SCIENCE, 85(4), 951–957. https://doi.org/10.3168/jds.S0022-0302(02)74154-4

Smith, P., Spooner, C., Lyman, R., George, C., Kloos, W., & Anderson, K. (2002). Distribution of strains of Staphylococcus aureus isolated from milk of cows in North Carolina. Annual Meeting, National Mastitis Council, Inc, 41(2002), 233–234.

Persson, S., Love, J., Tsou, P. L., Robertson, D., Thompson, W. F., & Boss, W. F. (2002). When a day makes a difference. Interpreting data from endoplasmic reticulum-targeted green fluorescent protein fusions in cells grown in suspension culture. Plant Physiology, 128(2), 341–344. https://doi.org/10.1104/pp.010840

Gibson, G. (2002). [Review of Microarrays in ecology and evolution: a preview]. MOLECULAR ECOLOGY, 11(1), 17–24. https://doi.org/10.1046/j.0962-1083.2001.01425.x

Sommer, J. R., Collins, E. B., Neiding, T., Rozeboom, K., Wong, F., & Petters, R. M. (2002). Conservation and regeneration of transgenic lines of swine by semen cryopreservation and artificial insemination. Lab Animal, 31(1), 25–31.

Rodriguez, K. F., Petters, R. M., Crosier, A. E., & Farin, C. E. (2002). Roles of gene transcription and PKA subtype activation in maturation of murine oocytes. Reproduction (Cambridge, England), 123(6), 799–806. https://doi.org/10.1530/rep.0.1230799

Yoon, S. S., Barrangou-Poueys, R., Breidt, F., Klaenhammer, T. R., & Fleming, H. P. (2002). Isolation and characterization of bacteriophages from fermenting sauerkraut. APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 68(2), 973–976. https://doi.org/10.1128/AEM.68.2.973-976.2002

Sturino, J. M., & Klaenhammer, T. R. (2002). Expression of antisense RNA targeted against Streptococcus thermophilus bacteriophages. APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 68(2), 588–596. https://doi.org/10.1128/AEM.68.2.588-596.2002

Buck, M. J., Squire, T. L., & Andrews, M. T. (2002). Coordinate expression of the PDK4 gene: a means of regulating fuel selection in a hibernating mammal. PHYSIOLOGICAL GENOMICS, 8(1), 5–13. https://doi.org/10.1152/physiolgenomics.00076.2001

Seo, T. K., Thorne, J. L., Hasegawa, M., & Kishino, H. (2002). A viral sampling design for testing the molecular clock and for estimating evolutionary rates and divergence times. BIOINFORMATICS, 18(1), 115–123. https://doi.org/10.1093/bioinformatics/18.1.115

Lyman, R. F., Nevo, E., & Mackay, T. F. C. (2002). Variation in Drosophila sensory bristle number at 'Evolution Canyon'. GENETICS RESEARCH, 80(3), 215–223. https://doi.org/10.1017/S0016672302005876

Gibson, G. (2002). Microarrays in ecology and evolution: A preview. Molecular Ecology, 11(1), 17–24.

Gibson, G., & Muse, S. V. (2002). A primer of genome science. Sunderland, MA: Sinauer.

Gibson, G., & Honeycutt, E. (2002). The evolution of developmental regulatory pathways. CURRENT OPINION IN GENETICS & DEVELOPMENT, 12(6), 695–700. https://doi.org/10.1016/S0959-437X(02)00352-0

Olsen, K. M., & Purugganan, M. D. (2002). Molecular evidence on the origin and evolution of glutinous rice. Genetics, 162(2), 941–950.

Crocker, A. W., & Robison, O. W. (2002). Genetic and nutritional effects on swine excreta. Journal of Animal Science, 80(11), 2809–2816. https://doi.org/10.2527/2002.80112809x

Ulker, B., Weissinger, A. K., & Spiker, S. (2002). E-coli chromosomal DNA in a transgene locus created by microprojectile bombardment in tobacco. TRANSGENIC RESEARCH, 11(3), 311–313. https://doi.org/10.1023/A:1015614220200

Barrangou, R., Yoon, S. S., Breidt, F., Fleming, H. P., & Klaenhammer, T. R. (2002). Characterization of six Leuconostoc fallax bacteriophages isolated from an industrial sauerkraut fermentation. APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 68(11), 5452–5458. https://doi.org/10.1128/AEM.68.11.5452-5458.2002

Perera, I. Y., Love, J., Heilmann, I., Thompson, W. F., & Boss, W. F. (2002). Up-regulation of phosphoinositide metabolism in tobacco cells constitutively expressing the human type I inositol polyphosphate 5-phosphatase. PLANT PHYSIOLOGY, 129(4), 1795–1806. https://doi.org/10.1104/pp.003426

Shepard, K. A., & Purugganan, M. D. (2002). [Review of The genetics of plant morphological evolution]. CURRENT OPINION IN PLANT BIOLOGY, 5(1), 49–55. https://doi.org/10.1016/S1369-5266(01)00227-8

Olsen, K. M. (2002). Population history of Manihot esculenta (Euphorbiaceae) inferred from nuclear DNA sequences. MOLECULAR ECOLOGY, 11(5), 901–911. https://doi.org/10.1046/j.1365-294X.2002.01493.x

Liebl, W., Kloos, W. E., & Ludwig, W. (2002). Plasmid-borne macrolide resistance in Micrococcus luteus. MICROBIOLOGY-SGM, 148, 2479–2487. https://doi.org/10.1099/00221287-148-8-2479

Wu, R. L., Ma, C. X., Wu, S. S., & Zeng, Z. B. (2002). Linkage mapping of sex-specific differences. GENETICAL RESEARCH, 79(1), 85–96. https://doi.org/10.1017/s0016672301005389

Long, J. C., Zhao, W., Rashotte, A. M., Muday, G. K., & Huber, S. C. (2002). Gravity-stimulated changes in auxin and invertase gene expression in maize pulvinal cells. PLANT PHYSIOLOGY, 128(2), 591–602. https://doi.org/10.1104/pp.010579

Gibson, G., & Mackay, T. F. C. (2002). [Review of Enabling population and quantitative genomics]. GENETICS RESEARCH, 80(1), 1–6. https://doi.org/10.1017/S0016672302005839

Gibson, G. (2002, May 14). Developmental evolution: Getting robust about robustness. CURRENT BIOLOGY, Vol. 12, pp. R347–R349. https://doi.org/10.1016/S0960-9822(02)00855-2

Kao, C. H., & Zeng, Z. B. (2002). Modeling epistasis of quantitative trait loci using Cockerham's model. Genetics, 160(3), 1243–1261.