Genetics - 2010

Scott, M. J., Atapattu, A., Schiemann, A. H., Concha, C., Henry, R., Carey, B.-lee, … Sarkar, A. (2010). Organisation and expression of a cluster of yolk protein genes in the Australian sheep blowfly, Lucilia cuprina. Genetica, 139(1), 63–70. https://doi.org/10.1007/s10709-010-9492-6

Moore, S. A., Ferhatoglu, Y., Jia, Y., Al-Jiab, R. A., & Scott, M. J. (2010). Structural and biochemical studies on the chromo-barrel domain of male specific lethal 3 (MSL3) reveal a binding preference for mono-or dimethyllysine 20 on histone H4. Journal of Biological Chemistry, 285(52), 40879–40890.

E Silva, L. D. C., Chang, S.-M., & Zeng, Z.-B. (2010). Power, sample size and confidence interval for quantitative trait loci mapping on multiple traits.

Mbeunkui, F., Scholl, E. H., Opperman, C. H., Goshe, M. B., & Bird, D. M. K. (2010). Proteomic and Bioinformatic Analysis of the Root-Knot Nematode Meloidogyne hapla: The Basis for Plant Parasitism. Journal of Proteome Research, 9(10), 5370–5381. https://doi.org/10.1021/pr1006069

Haugen, A. C., Di Prospero, N. A., Parker, J. S., Fannin, R. D., Chou, J., Meyer, J. N., … Van Houten, B. (2010). Altered Gene Expression and DNA Damage in Peripheral Blood Cells from Friedreich's Ataxia Patients: Cellular Model of Pathology. PLoS Genetics, 6(1), e1000812. https://doi.org/10.1371/journal.pgen.1000812

Ji, Y., Hebbring, S., Zhu, H., Jenkins, G. D., Biernacka, J., Snyder, K., … Weinshilboum, R. M. (2010). Glycine and a Glycine Dehydrogenase (GLDC) SNP as Citalopram/Escitalopram Response Biomarkers in Depression: Pharmacometabolomics-Informed Pharmacogenomics. Clinical Pharmacology & Therapeutics, 89(1), 97–104. https://doi.org/10.1038/clpt.2010.250

Kaddurah-Daouk, R., Baillie, R. A., Zhu, H., Zeng, Z.-B., Wiest, M. M., Nguyen, U. T., … Krauss, R. M. (2010). Lipidomic analysis of variation in response to simvastatin in the Cholesterol and Pharmacogenetics Study. Metabolomics, 6(2), 191–201. https://doi.org/10.1007/s11306-010-0207-x

Franks, R. G., & Liu, Z. (2010, June). Floral Homeotic Gene Regulation. Horticultural Reviews, pp. 41–77. https://doi.org/10.1002/9780470650813.ch2

Schiemann, A. H., Li, F., Weake, V. M., Belikoff, E. J., Klemmer, K. C., Moore, S. A., & Scott, M. J. (2010). Sex-biased transcription enhancement by a 5' tethered Gal4-MOF histone acetyltransferase fusion protein in Drosophila. BMC Molecular Biology, 11(1). https://doi.org/10.1186/1471-2199-11-80

Knauer, M., Stalder, K. J., Serenius, T., Baas, T. J., Berger, P. J., Karriker, L., … Tokach, M. D. (2010). Factors associated with sow stayability in 6 genotypes. JOURNAL OF ANIMAL SCIENCE, 88(11), 3486–3492. https://doi.org/10.2527/jas.2009-2319

Hines, H. M., & Cameron, S. A. (2010). The phylogenetic position of the bumble bee inquiline Bombus inexspectatus and implications for the evolution of social parasitism. Insectes Sociaux, 57(4), 379–383.

Schiemann, A. H., Weake, V. M., Li, F., Laverty, C., Belikoff, E. J., & Scott, M. J. (2010). The importance of location and orientation of male specific lethal complex binding sites of differing affinities on reporter gene dosage compensation in Drosophila. Biochemical and Biophysical Research Communications, 402(4), 699–704. https://doi.org/10.1016/j.bbrc.2010.10.088

Chavali, V. R. M., Sommer, J. R., Petters, R. M., & Ayyagari, R. (2010). Identification of a Promoter for the Human C1q-Tumor Necrosis Factor-Related Protein-5 Gene Associated with Late-Onset Retinal Degeneration. INVESTIGATIVE OPHTHALMOLOGY & VISUAL SCIENCE, 51(11), 5499–5507. https://doi.org/10.1167/iovs.10-5543

Eversley, C. D., Clark, T., Xie, Y., Steigerwalt, J., Bell, T. A., Villena, F. P. M., & Threadgill, D. W. (2010). Genetic mapping and developmental timing of transmission ratio distortion in a mouse interspecific backcross. BMC GENETICS, 11. https://doi.org/10.1186/1471-2156-11-98

Sarah J. O'Flaherty, & Klaenhammer, T. R. (2010). Functional and phenotypic characterization of a protein from Lactobacillus acidophilus involved in cell morphology, stress tolerance and adherence to intestinal cells. MICROBIOLOGY-SGM, 156, 3360–3367. https://doi.org/10.1099/mic.0.043158-0

Concha, C., Li, F., & Scott, M. J. (2010). Conservation and sex-specific splicing of the doublesex gene in the economically important pest species Lucilia cuprina. Journal of Genetics, 89(3), 279–285. https://doi.org/10.1007/s12041-010-0039-5

Nole-Wilson, S., Rueschhoff, E. E., Bhatti, H., & Franks, R. G. (2010). Synergistic disruptions in seuss cyp85A2 double mutants reveal a role for brassinolide synthesis during gynoecium and ovule development. BMC PLANT BIOLOGY, 10. https://doi.org/10.1186/1471-2229-10-198

Note-Wilson, S., Azhakanandam, S., & Franks, R. G. (2010). Polar auxin transport together with AINTEGUMENTA and REVOLUTA coordinate early Arabidopsis gynoecium development. DEVELOPMENTAL BIOLOGY, 346(2), 181–195. https://doi.org/10.1016/j.ydbio.2010.07.016

Ceron-Souza, I., Rivera-Ocasio, E., Medina, E., Jimenez, J. A., McMillan, W. O., & Bermingham, E. (2010). HYBRIDIZATION AND INTROGRESSION IN NEW WORLD RED MANGROVES, RHIZOPHORA (RHIZOPHORACEAE). AMERICAN JOURNAL OF BOTANY, 97(6), 945–957. https://doi.org/10.3732/ajb.0900172

Baxter, S. W., Nadeau, N. J., Maroja, L. S., Wilkinson, P., Counterman, B. A., Dawson, A., … Joron, M. (2010). Genomic hotspots for adaptation: The population genetics of Mullerian mimicry in the Heliconius melpomene Clade. PLoS Genetics, 6(4).

Counterman, B. A., Araujo-Perez, F., Hines, H. M., Baxter, S. W., Morrison, C. M., Lindstrom, D. P., … McMillan, W. O. (2010). Genomic Hotspots for Adaptation: The Population Genetics of Müllerian Mimicry in Heliconius erato. PLoS Genetics, 6(2), e1000796. https://doi.org/10.1371/journal.pgen.1000796

Silva, L. D. C. E., & Zeng, Z.-B. (2010). Current Progress on Statistical Methods for Mapping Quantitative Trait Loci from Inbred Line Crosses. JOURNAL OF BIOPHARMACEUTICAL STATISTICS, 20(2), 454–481. https://doi.org/10.1080/10543400903572845

Damelin, L. H., Mavri-Damelin, D., Klaenhammer, T. R., & Tiemessen, C. T. (2010). Plasmid Transduction Using Bacteriophage Phi adh for Expression of CC Chemokines by Lactobacillus gasseri ADH. APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 76(12), 3878–3885. https://doi.org/10.1128/aem.00139-10

Gordon, R. R., La Merrill, M., Hunter, K. W., Sorensen, P., Threadgill, D. W., & Pomp, D. (2010). Dietary fat-dependent transcriptional architecture and copy number alterations associated with modifiers of mammary cancer metastasis. Clinical & Experimental Metastasis, 27(5), 279–293.

Mohamadzadeh, M., Durmaz, E., Zadeh, M., Pakanati, K. C., Gramarossa, M., Cohran, V., & Klaenhammer, T. R. (2010). Targeted expression of anthrax protective antigen by Lactobacillus gasseri as an anthrax vaccine. FUTURE MICROBIOLOGY, 5(8), 1289–1296. https://doi.org/10.2217/fmb.10.78

Hu, F., Liu, J. F., Zeng, Z. B., Ding, X. D., Yin, C. C., Gong, Y. Z., & Zhang, Q. (2010). QTL Identification Using Combined Linkage and Linkage Disequilibrium Mapping for Milk Production Traits on BTA6 in Chinese Holstein Population. ASIAN-AUSTRALASIAN JOURNAL OF ANIMAL SCIENCES, 23(10), 1261–1267. https://doi.org/10.5713/ajas.2010.10011

Reed, L. K., Williams, S., Springston, M., Brown, J., Freeman, K., DesRoches, C. E., … Gibson, G. (2010). Genotype-by-diet interactions drive metabolic phenotype variation in Drosophila melanogaster. Genetics, 185(3), 1009–1019.

Quek, S.-P., Counterman, B. A., Moura, P. A., Cardoso, M. Z., Marshall, C. R., McMillan, W. O., & Kronforst, M. R. (2010). Dissecting comimetic radiations in Heliconius reveals divergent histories of convergent butterflies. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 107(16), 7365–7370. https://doi.org/10.1073/pnas.0911572107

Gauthier, J., Champagne, N., Lafreniere, R. G., Xiong, L., Spiegelman, D., Brustein, E., … Fathalli, F. (2010). De novo mutations in the gene encoding the synaptic scaffolding protein SHANK3 in patients ascertained for schizophrenia. Proceedings of the National Academy of Sciences of the United States of America, 107(17), 7863–7868.

Lee, T.-J., Pascuzzi, P. E., Settlage, S. B., Shultz, R. W., Tanurdzic, M., Rabinowicz, P. D., … Thompson, W. F. (2010). Arabidopsis thaliana Chromosome 4 Replicates in Two Phases That Correlate with Chromatin State. PLoS Genetics, 6(6), e1000982. https://doi.org/10.1371/journal.pgen.1000982

Awadalla, P., Gauthier, J., Myers, R. A., Casals, F., Hamdan, F. F., Griffing, A. R., … DeLisi, J. L. E. (2010). Direct measure of the de novo mutation rate in autism and schizophrenia cohorts. American Journal of Human Genetics, 87(3), 316–324.

Rusyn, I., Gatti, D. M., Wiltshire, T., Kleeberger, S. R., & Threadgill, D. W. (2010, September). Toxicogenetics: population-based testing of drug and chemical safety in mouse models (vol 11, pg 1127, 2010). PHARMACOGENOMICS, Vol. 11, pp. 1344–1344. https://doi.org/10.2217/pgs.10.100

Douglas, G. L., & Klaenhammer, T. R. (2010). Genomic Evolution of Domesticated Microorganisms. ANNUAL REVIEW OF FOOD SCIENCE AND TECHNOLOGY, VOL 1, Vol. 1, pp. 397–414. https://doi.org/10.1146/annurev.food.102308.124134

La Merrill, M., Harper, R., Birnbaum, L. S., Cardiff, R. D., & Threadgill, D. W. (2010). Maternal Dioxin Exposure Combined with a Diet High in Fat Increases Mammary Cancer Incidence in Mice. ENVIRONMENTAL HEALTH PERSPECTIVES, 118(5), 596–601. https://doi.org/10.1289/ehp.0901047

Goh, Y. J., & Klaenhammer, T. R. (2010). Functional Roles of Aggregation-Promoting-Like Factor in Stress Tolerance and Adherence of Lactobacillus acidophilus NCFM. APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 76(15), 5005–5012. https://doi.org/10.1128/aem.00030-10

De Luca, M., Klimentidis, Y. C., Casazza, K., Chambers, M. M., Cho, R., Harbison, S. T., … Fernandez, J. R. (2010). A conserved role for syndecan family members in the regulation of whole-body energy metabolism. PLoS One, 5(6).

Large, E. E., & Mathies, L. D. (2010). hunchback and Ikaros-like zinc finger genes control reproductive system development in Caenorhabditis elegans. Developmental Biology, 339(1), 51–64.

Mu, J. B., Myers, R. A., Jiang, H. Y., Liu, S. F., Ricklefs, S., Waisberg, M., … Seila, S. (2010). Plasmodium falciparum genome-wide scans for positive selection, recombination hot spots and resistance to antimalarial drugs. Nature Genetics, 42(3), 268–113.

O'Flaherty, S., & Klaenhammer, T. R. (2010, April). The role and potential of probiotic bacteria in the gut, and the communication between gut microflora and gut/host. INTERNATIONAL DAIRY JOURNAL, Vol. 20, pp. 262–268. https://doi.org/10.1016/j.idairyj.2009.11.011

Kocher, S. D., Ayroles, J. F., Stone, E. A., & Grozinger, C. M. (2010). Individual variation in pheromone response correlates with reproductive traits and brain gene expression in worker honey bees. PLoS One, 5(2).

Mauchline, T. H., Mohan, S., Davies, K. G., Schaff, J. E., Opperman, C. H., Kerry, B. R., & Hirsch, P. R. (2010). A method for release and multiple strand amplification of small quantities of DNA from endospores of the fastidious bacterium Pasteuria penetrans. LETTERS IN APPLIED MICROBIOLOGY, 50(5), 515–521. https://doi.org/10.1111/j.1472-765x.2010.02830.x

Conkling, M. A., Song, W., & Mendu, N. (2010). Tobacco products with increased nicotine.

Sozzani, R., Maggio, C., Giordo, R., Umana, E., Ascencio-Ibanez, J. T., Hanley-Bowdoin, L., … Albani, D. (2010). The E2FD/DEL2 factor is a component of a regulatory network controlling cell proliferation and development in Arabidopsis. PLANT MOLECULAR BIOLOGY, 72(4-5), 381–395. https://doi.org/10.1007/s11103-009-9577-8

Bao, F., Azhakanandam, S., & Franks, R. G. (2010). SEUSS and SEUSS-LIKE Transcriptional Adaptors Regulate Floral and Embryonic Development in Arabidopsis. PLANT PHYSIOLOGY, 152(2), 821–836. https://doi.org/10.1104/pp.109.146183

Binkley, J., Karra, K., Kirby, A., Hosobuchi, M., Stone, E. A., & Sidow, A. (2010). ProPhylER: A curated online resource for protein function and structure based on evolutionary constraint analyses. GENOME RESEARCH, 20(1), 142–154. https://doi.org/10.1101/gr.097121.109

Idaghdour, Y., Czika, W., Shianna, K. V., Lee, S. H., Visscher, P. M., Martin, H. C., … Gibson, G. (2010). Geographical genomics of human leukocyte gene expression variation in southern Morocco. NATURE GENETICS, 42(1), 62–U79. https://doi.org/10.1038/ng.495