Genetics - 2017

Scott, M. J., Gould, F., Lorenzen, M., Grubbs, N., Edwards, O., & O’Brochta, D. (2017). Agricultural production: assessment of the potential use of Cas9-mediated gene drive systems for agricultural pest control. Journal of Responsible Innovation, 5(sup1), S98–S120. https://doi.org/10.1080/23299460.2017.1410343

Merchante, C., Yun, J., Valpuesta-Fernandez, V., Stepanova, A., & Alonso, J. (2017). Translation regulation of uORFs-containing genes in Arabidopsis.

Dearden, P. K., Gemmell, N. J., Mercier, O. R., Lester, P. J., Scott, M. J., Newcomb, R. D., … Penman, D. R. (2017). The potential for the use of gene drives for pest control in New Zealand: a perspective. Journal of the Royal Society of New Zealand, 48(4), 225–244. https://doi.org/10.1080/03036758.2017.1385030

Garcia, J. F., Carbone, M. A., Mackay, T. F. C., & Anholt, R. R. H. (2017). Regulation of Drosophila Lifespan by bellwether Promoter Alleles. Scientific Reports, 7(1). https://doi.org/10.1038/S41598-017-04530-X

Michelmore, R., Coaker, G., Bart, R., Beattie, G., Bent, A., Bruce, T., … Walsh, J. (2017). Foundational and Translational Research Opportunities to Improve Plant Health. Molecular Plant-Microbe Interactions, 30(7), 515–516. https://doi.org/10.1094/mpmi-01-17-0010-cr

Urkasemsin, G., Nielsen, D. M., Singleton, A., Arepalli, S., Hernandez, D., Agler, C., & Olby, N. J. (2017). Genetics of Hereditary Ataxia in Scottish Terriers. Journal of Veterinary Internal Medicine, 31(4), 1132–1139. https://doi.org/10.1111/jvim.14738

Merchante, C., & Stepanova, A. N. (2017). The triple response assay and its use to characterize ethylene mutants in arabidopsis. In Methods in Molecular Biology (Vol. 1573, pp. 163–209). https://doi.org/10.1007/978-1-4939-6854-1_13

Ferrando, A., Castellano, M. M., Lisón, P., Leister, D., Stepanova, A. N., & Hanson, J. (2017). Editorial: Relevance of translational regulation on plant growth and environmental responses. Frontiers in Plant Science, 8. https://doi.org/10.3389/fpls.2017.02170

Merchante, C., & Stepanova, A. N. (2017). The triple response assay and its use to characterize ethylene mutants in Arabidopsis. Ethylene Signaling: Methods and Protocols, 1573, 163–209.

Sehra, B., & Franks, R. G. (2017). Redundant CArG Box Cis-motif Activity Mediates SHATTERPROOF2 Transcriptional Regulation during Arabidopsis thaliana Gynoecium Development. FRONTIERS IN PLANT SCIENCE, 8. https://doi.org/10.3389/fpls.2017.01712

Theilmann, M. C., Goh, Y. J., Nielsen, K. F., Klaenhammer, T. R., Barrangou, R., & Abou Hachem, M. (2017). Lactobacillus acidophilus Metabolizes Dietary Plant Glucosides and Externalizes Their Bioactive Phytochemicals. MBIO, 8(6). https://doi.org/10.1128/mbio.01421-17

Wear, E. E., Song, J., Zynda, G. J., LeBlanc, C., Lee, T.-J., Mickelson-Young, L., … Thompson, W. F. (2017). Genomic Analysis of the DNA Replication Timing Program during Mitotic S Phase in Maize (Zea mays) Root Tips. PLANT CELL, 29(9), 2126–2149. https://doi.org/10.1105/tpc.17.00037

Scott, M. J., Concha, C., Welch, J. B., Phillips, P. L., & Skoda, S. R. (2017). Review of research advances in the screwworm eradication program over the past 25 years. Entomologia Experimentalis Et Applicata, 164(3), 226–236. https://doi.org/10.1111/eea.12607

Schumann, M. J., Zeng, Z.-B., Clough, M. E., & Yencho, G. C. (2017). Linkage map construction and QTL analysis for internal heat necrosis in autotetraploid potato. THEORETICAL AND APPLIED GENETICS, 130(10), 2045–2056. https://doi.org/10.1007/s00122-017-2941-1

Holterman, M., Karegar, A., Mooijman, P., Megen, H., Elsen, S., Vervoort, M. T. W., … Helder, J. (2017). Disparate gain and loss of parasitic abilities among nematode lineages. PLOS ONE, 12(9). https://doi.org/10.1371/journal.pone.0185445

Edwards, K. D., Fernandez-Pozo, N., Drake-Stowe, K., Humphry, M., Evans, A. D., Bombarely, A., … Mueller, L. A. (2017). A reference genome for Nicotiana tabacum enables map-based cloning of homeologous loci implicated in nitrogen utilization efficiency. BMC GENOMICS, 18. https://doi.org/10.1186/s12864-017-3791-6

Ma, Q., Liu, X., Franks, R. G., & Xiang, Q.-Y. (2017). Alterations of CorTFL1 and CorAP1 expression correlate with major evolutionary shifts of inflorescence architecture in Cornus (Cornaceae) - a proposed model for variation of closed inflorescence forms. NEW PHYTOLOGIST, 216(2), 519–535. https://doi.org/10.1111/nph.14197

Reyes, M. I., Flores-Vergara, M. A., Guerra-Peraza, O., Rajabu, C., Desai, J., Hiromoto-Ruiz, Y. H., … Robertson, D. (2017). A VIGS screen identifies immunity in the Arabidopsis Pla-1 accession to viruses in two different genera of the Geminiviridae. PLANT JOURNAL, 92(5), 796–807. https://doi.org/10.1111/tpj.13716

Zynda, G. J., Song, J., Concia, L., Wear, E. E., Hanley-Bowdoin, L., Thompson, W. F., & Vaughn, M. W. (2017). Repliscan: a tool for classifying replication timing regions. BMC BIOINFORMATICS, 18, 1–14. https://doi.org/10.1186/s12859-017-1774-x

Lee, Y. C. G., Yang, Q., Chi, W., Turkson, S. A., Du, W. A., Kemkemer, C., … Zhuang, X. (2017). Genetic Architecture of Natural Variation Underlying Adult Foraging Behavior That Is Essential for Survival of Drosophila melanogaster. GENOME BIOLOGY AND EVOLUTION, 9(5), 1357–1369. https://doi.org/10.1093/gbe/evx089

Estrada-Johnson, E., Csukasi, F., Pizarro, C. M., Vallarino, J. G., Kiryakova, Y., Vioque, A., … Valpuesta, V. (2017, July 24). Transcriptomic Analysis in Strawberry Fruits Reveals Active Auxin Biosynthesis and Signaling in the Ripe Receptacle (vol 8, pg 889, 2017). FRONTIERS IN PLANT SCIENCE, Vol. 8. https://doi.org/10.3389/fpls.2017.01305

Johnson, B. R., O'Flaherty, S., Goh, Y. J., Carroll, I., Barrangou, R., & Klaenhammer, T. R. (2017). The S-layer Associated Serine Protease Homolog PrtX Impacts Cell Surface-Mediated Microbe-Host Interactions of Lactobacillus acidophilus NCFM. FRONTIERS IN MICROBIOLOGY, 8. https://doi.org/10.3389/fmicb.2017.01185

Chu, F., Klobasa, W., Wu, P., Pinzi, S., Grubbs, N., Gorski, S., … Lorenzen, M. D. (2017). Germline transformation of the western corn rootworm, Diabrotica virgifera virgifera. INSECT MOLECULAR BIOLOGY, 26(4), 440–452. https://doi.org/10.1111/imb.12305

Steede, W. T., Ma, J. M., Eickholt, D. P., Drake-Stowe, K. E., Kernodle, S. P., Shew, H. D., … Lewis, R. S. (2017). The Tobacco Trichome Exudate Z-abienol and Its Relationship With Plant Resistance to Phytophthora nicotianae. PLANT DISEASE, 101(7), 1214–1221. https://doi.org/10.1094/pdis-10-16-1512-re

Guo, Y., Fudali, S., Gimeno, J., DiGennaro, P., Chang, S., Williamson, V. M., … Nielsen, D. M. (2017). Networks Underpinning Symbiosis Revealed Through Cross-Species eQTL Mapping. Genetics, 206(4), 2175–2184. https://doi.org/10.1534/genetics.117.202531

Moore, E. C., & Roberts, R. B. (2017). Genital morphology and allometry differ by species and sex in Malawi cichlid fishes. HYDROBIOLOGIA, 791(1), 127–143. https://doi.org/10.1007/s10750-016-2912-6

Peterson, E. N., Cline, M. E., Moore, E. C., Roberts, N. B., & Roberts, R. B. (2017). Genetic sex determination in Astatotilapia calliptera, a prototype species for the Lake Malawi cichlid radiation. SCIENCE OF NATURE, 104(5-6). https://doi.org/10.1007/s00114-017-1462-8

Selle, K., Goh, Y. J., Johnson, B. R., O'Flaherty, S., Andersen, J. M., Barrangou, R., & Klaenhammer, T. R. (2017). Deletion of lipoteichoic acid synthase impacts expression of genes encoding cell surface proteins in lactobacillus acidophilus. Frontiers in Microbiology, 8. https://doi.org/10.3389/fmicb.2017.00553

Roberts, R. B., Moore, E. C., & Kocher, T. D. (2017). An allelic series at pax7a is associated with colour polymorphism diversity in Lake Malawi cichlid fish. MOLECULAR ECOLOGY, 26(10), 2625–2639. https://doi.org/10.1111/mec.13975

Ritz, K. R., Noor, M. A. F., & Singh, N. D. (2017). [Review of Variation in Recombination Rate: Adaptive or Not?]. TRENDS IN GENETICS, 33(5), 364–374. https://doi.org/10.1016/j.tig.2017.03.003

Yan, Y., Linger, R. J., & Scott, M. J. (2017). Building early-larval sexing systems for genetic control of the Australian sheep blow fly Lucilia cuprina using two constitutive promoters. Scientific Reports, 7(1). https://doi.org/10.1038/s41598-017-02763-4

Merchante, C., Stepanova, A. N., & Alonso, J. M. (2017). Translation regulation in plants: an interesting past, an exciting present and a promising future. PLANT JOURNAL, 90(4), 628–653. https://doi.org/10.1111/tpj.13520

Estrada-Johnson, E., Csukasi, F., Pizarro, C. M., Vallarino, J. G., Kiryakova, Y., Vioque, A., … Valpuesta, V. (2017). Transcriptomic analysis in strawberry fruits reveals active auxin biosynthesis and signaling in the ripe receptacle. Frontiers in Plant Science, 8.

Fraimout, A., Debat, V., Fellous, S., Hufbauer, R. A., Foucaud, J., Pudlo, P., … al. (2017). Deciphering the routes of invasion of Drosophila suzukii by means of ABC random forest. Molecular Biology and Evolution, 34(4), 980–996.

Stout, E., Klaenhammer, T., & Barrangou, R. (2017). CRISPR-Cas Technologies and Applications in Food Bacteria. ANNUAL REVIEW OF FOOD SCIENCE AND TECHNOLOGY, VOL 8, Vol. 8, pp. 413–437. https://doi.org/10.1146/annurev-food-072816-024723

Moller, M. S., Goh, Y. J., Rasmussen, K. B., Cypryk, W., Celebioglu, H. U., Klaenhammer, T. R., … Abou Hachem, M. (2017). An Extracellular Cell-Attached Pullulanase Confers Branched alpha-Glucan Utilization in Human Gut Lactobacillus acidophilus. APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 83(12). https://doi.org/10.1128/aem.00402-17

Shin, S. J., Zhang, H. H., & Wu, Y. C. (2017). A Nonparametric survival function estimator via censored kernel quantile regressions. Statistica Sinica, 27(1), 457–478.

Ruark, C. L., Koenning, S. R., Davis, E. L., Opperman, C. H., Lommel, S. A., Mitchum, M. G., & Sit, T. L. (2017). Soybean cyst nematode culture collections and field populations from North Carolina and Missouri reveal high incidences of infection by viruses. PLOS ONE, 12(1). https://doi.org/10.1371/journal.pone.0171514